BLASTX nr result

ID: Panax21_contig00000896 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000896
         (508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525126.1| conserved hypothetical protein [Ricinus comm...    94   2e-17
emb|CAN61650.1| hypothetical protein VITISV_027795 [Vitis vinifera]    91   8e-17
ref|XP_002881860.1| At2g42560 [Arabidopsis lyrata subsp. lyrata]...    83   3e-14
ref|XP_002325582.1| predicted protein [Populus trichocarpa] gi|2...    75   4e-12

>ref|XP_002525126.1| conserved hypothetical protein [Ricinus communis]
           gi|223535585|gb|EEF37253.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 558

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 70/188 (37%), Positives = 94/188 (50%), Gaps = 34/188 (18%)
 Frame = -1

Query: 472 EKKLENSGVQRITL-RIKSMASNQARRENYTNFDDRQVHVEKDKVPKITSHFESLAVS-P 299
           EK+   S     TL R + MAS Q+RREN T+  +R+VH+EKD+VPK+T HFESL    P
Sbjct: 44  EKEKSTSRNPENTLERRRKMASEQSRRENTTS--ERKVHLEKDRVPKMTLHFESLVTEKP 101

Query: 298 ANIVSGHD------------QERPH---------------GNQVQXXXXXXXXXXXXXXR 200
                G +             +RP                 ++V+               
Sbjct: 102 TETTQGSEGSTTASTNAVGEADRPEKAGEGNGTGAQFESLADKVKSKEDAPSDQEQGRNY 161

Query: 199 TVGKFEMQGGEDKDFGRDRKSQVKGDDE-----DISKYRQTAQQNSMEAIRAAEERYNQV 35
           TVGKFE  G  +K   ++ K + K + E     +ISK RQTAQQNSMEAI+AA+ERY + 
Sbjct: 162 TVGKFEASGEGEKGSNKEGKEEKKENKEQPSLEEISKLRQTAQQNSMEAIKAAQERYEKA 221

Query: 34  KDSAAQKL 11
           K+ A Q L
Sbjct: 222 KEKANQGL 229


>emb|CAN61650.1| hypothetical protein VITISV_027795 [Vitis vinifera]
          Length = 396

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 62/160 (38%), Positives = 82/160 (51%), Gaps = 24/160 (15%)
 Frame = -1

Query: 418 MASNQARRENYTNFDDRQVHVEKDKVPKITSHFESLAVSPANIVSGHDQER-----PHGN 254
           MAS Q RR+N T   +R+ H+E ++VPK+TSHFESL+      V G D  R     P   
Sbjct: 1   MASEQERRDNTTK--ERETHLEVERVPKMTSHFESLSER----VKGGDMARSESTVPPSE 54

Query: 253 QVQXXXXXXXXXXXXXXRTVGKFEMQGGEDK-------------------DFGRDRKSQV 131
           +                R +GKFEM  GE+K                   + GRD + + 
Sbjct: 55  EGSGKGGEARGGESRGPRAIGKFEMNVGEEKGSSRGGSEEREVDTERSSKEGGRDEEKET 114

Query: 130 KGDDEDISKYRQTAQQNSMEAIRAAEERYNQVKDSAAQKL 11
               E+ISK+R+ AQQNS+EAIRAAEERY + K+  A KL
Sbjct: 115 TPSLEEISKFREKAQQNSIEAIRAAEERYQKAKELGASKL 154


>ref|XP_002881860.1| At2g42560 [Arabidopsis lyrata subsp. lyrata]
           gi|297327699|gb|EFH58119.1| At2g42560 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 631

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 55/144 (38%), Positives = 68/144 (47%), Gaps = 13/144 (9%)
 Frame = -1

Query: 418 MASNQARRENYTNFDDRQVHVEKDKVPKITSHFESLAVSPANIVSGHDQERPHGNQV--- 248
           MAS QA+REN     +R+V VEKD+VPK+TSHFES+A    +  +   Q    G Q    
Sbjct: 1   MASEQAKRENKVT--EREVQVEKDRVPKMTSHFESMAEKGKDFDTQRHQTEGGGTQFVSL 58

Query: 247 ----------QXXXXXXXXXXXXXXRTVGKFEMQGGEDKDFGRDRKSQVKGDDEDISKYR 98
                                     +VGKF           +D K   K   EDI  YR
Sbjct: 59  SDKGSNMSVSNEGEGETKMKRTQMPHSVGKFVTSSESGPGKKKDEKEHEKASLEDIHGYR 118

Query: 97  QTAQQNSMEAIRAAEERYNQVKDS 26
             AQQ SM+ IRAAEERYN+ K+S
Sbjct: 119 ANAQQKSMDTIRAAEERYNKAKES 142


>ref|XP_002325582.1| predicted protein [Populus trichocarpa] gi|222862457|gb|EEE99963.1|
           predicted protein [Populus trichocarpa]
          Length = 465

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 53/156 (33%), Positives = 83/156 (53%), Gaps = 18/156 (11%)
 Frame = -1

Query: 418 MASNQARRENYTNFDDRQVHVEKDKVPKITSHFESL------AVSPANIVSGH------- 278
           MAS Q+RRE+ T+  +R+ +VE+++VPK+ SHFESL      +V   NI  G        
Sbjct: 1   MASEQSRRESATS--ERENYVERERVPKMASHFESLIEKTKESVVEENIGEGGNETGAQY 58

Query: 277 -----DQERPHGNQVQXXXXXXXXXXXXXXRTVGKFEMQGGEDKDFGRDRKSQVKGDDED 113
                D+ R  G  V                  G  E +G ++ + G DR  + +   ++
Sbjct: 59  FESLADKMRGAGTDVSSDKERERREEEQEQVEGGGKETEGKQEAN-GSDRNKEQQLSLDE 117

Query: 112 ISKYRQTAQQNSMEAIRAAEERYNQVKDSAAQKLGA 5
           I+K R+TAQ+NS EA+ AAEERY + K+ A++ +G+
Sbjct: 118 ITKLRETAQKNSFEALNAAEERYEKAKEKASRVVGS 153


Top