BLASTX nr result

ID: Panax21_contig00000895 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000895
         (982 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513178.1| poly-A binding protein, putative [Ricinus co...   108   3e-21
emb|CBI24866.3| unnamed protein product [Vitis vinifera]              106   8e-21
ref|XP_003633575.1| PREDICTED: uncharacterized protein LOC100855...   106   8e-21
ref|XP_002313291.1| predicted protein [Populus trichocarpa] gi|2...   103   6e-20
ref|XP_002445914.1| hypothetical protein SORBIDRAFT_07g027950 [S...   100   9e-19

>ref|XP_002513178.1| poly-A binding protein, putative [Ricinus communis]
           gi|223547676|gb|EEF49169.1| poly-A binding protein,
           putative [Ricinus communis]
          Length = 514

 Score =  108 bits (269), Expect = 3e-21
 Identities = 64/100 (64%), Positives = 74/100 (74%)
 Frame = -2

Query: 693 GLYSSGHAAEDTDSRTIFVSNVHFAATKDSLSRHFNKFGDVLKVWLF*RMQGQGTTKRVS 514
           G Y++G   ED DSRTIFVSNVHFAATKDSLSRHFNKFGDVLKV +   M    T + + 
Sbjct: 325 GSYATGRPLEDADSRTIFVSNVHFAATKDSLSRHFNKFGDVLKVVI---MADAATGQPMG 381

Query: 513 LR*IHEKRSKEAAEHALSLDGTSFMSRILKVCNSRNPSHQ 394
              I   R KEAA++ALSLDGTSFMSRILKV   R+P++Q
Sbjct: 382 SAYIEFMR-KEAADNALSLDGTSFMSRILKVV-KRSPANQ 419


>emb|CBI24866.3| unnamed protein product [Vitis vinifera]
          Length = 694

 Score =  106 bits (265), Expect = 8e-21
 Identities = 62/100 (62%), Positives = 70/100 (70%)
 Frame = -2

Query: 693 GLYSSGHAAEDTDSRTIFVSNVHFAATKDSLSRHFNKFGDVLKVWLF*RMQGQGTTKRVS 514
           G YS+G   ED DSRTIFV+NVHFAATKDSLSRHFNKFG+V+KV +         T +  
Sbjct: 510 GSYSTGRPLEDADSRTIFVNNVHFAATKDSLSRHFNKFGEVVKVIIV----TDAATGQPK 565

Query: 513 LR*IHEKRSKEAAEHALSLDGTSFMSRILKVCNSRNPSHQ 394
                E   KEAAEHALSLDGTSFMSRILKV   R+ +HQ
Sbjct: 566 GSAYVEFMRKEAAEHALSLDGTSFMSRILKVV-KRSSTHQ 604


>ref|XP_003633575.1| PREDICTED: uncharacterized protein LOC100855398 [Vitis vinifera]
          Length = 700

 Score =  106 bits (265), Expect = 8e-21
 Identities = 62/100 (62%), Positives = 70/100 (70%)
 Frame = -2

Query: 693 GLYSSGHAAEDTDSRTIFVSNVHFAATKDSLSRHFNKFGDVLKVWLF*RMQGQGTTKRVS 514
           G YS+G   ED DSRTIFV+NVHFAATKDSLSRHFNKFG+V+KV +         T +  
Sbjct: 516 GSYSTGRPLEDADSRTIFVNNVHFAATKDSLSRHFNKFGEVVKVIIV----TDAATGQPK 571

Query: 513 LR*IHEKRSKEAAEHALSLDGTSFMSRILKVCNSRNPSHQ 394
                E   KEAAEHALSLDGTSFMSRILKV   R+ +HQ
Sbjct: 572 GSAYVEFMRKEAAEHALSLDGTSFMSRILKVV-KRSSTHQ 610


>ref|XP_002313291.1| predicted protein [Populus trichocarpa] gi|222849699|gb|EEE87246.1|
           predicted protein [Populus trichocarpa]
          Length = 762

 Score =  103 bits (257), Expect = 6e-20
 Identities = 59/93 (63%), Positives = 67/93 (72%)
 Frame = -2

Query: 693 GLYSSGHAAEDTDSRTIFVSNVHFAATKDSLSRHFNKFGDVLKVWLF*RMQGQGTTKRVS 514
           G Y++G   ED DSRTIFVSNVHFAATKDSLSRHFNKFG+VLKV +         T    
Sbjct: 532 GPYTAGCPLEDADSRTIFVSNVHFAATKDSLSRHFNKFGEVLKVVIVTDAATGQPTGSAY 591

Query: 513 LR*IHEKRSKEAAEHALSLDGTSFMSRILKVCN 415
           +  +H    KEAA++ALSLDGTSFMSRILKV N
Sbjct: 592 VEFMH----KEAADNALSLDGTSFMSRILKVMN 620


>ref|XP_002445914.1| hypothetical protein SORBIDRAFT_07g027950 [Sorghum bicolor]
           gi|241942264|gb|EES15409.1| hypothetical protein
           SORBIDRAFT_07g027950 [Sorghum bicolor]
          Length = 694

 Score = 99.8 bits (247), Expect = 9e-19
 Identities = 57/98 (58%), Positives = 67/98 (68%)
 Frame = -2

Query: 687 YSSGHAAEDTDSRTIFVSNVHFAATKDSLSRHFNKFGDVLKVWLF*RMQGQGTTKRVSLR 508
           YS+ H  ED DSRT++VSNVHFAATKDSLSRHFNKFG VLKV +         T    + 
Sbjct: 523 YSTAHPTEDADSRTLYVSNVHFAATKDSLSRHFNKFGAVLKVVIVTNAATGQPTGSAYVE 582

Query: 507 *IHEKRSKEAAEHALSLDGTSFMSRILKVCNSRNPSHQ 394
            +H    KE+AE ALSL+GTSFM+RILKV   R  SH+
Sbjct: 583 FLH----KESAERALSLNGTSFMTRILKVV--RRSSHE 614


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