BLASTX nr result

ID: Panax21_contig00000894 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000894
         (1635 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267656.1| PREDICTED: condensin complex subunit 3 [Viti...    52   3e-10
emb|CAN73007.1| hypothetical protein VITISV_040123 [Vitis vinifera]    50   2e-09
ref|XP_003633850.1| PREDICTED: serine carboxypeptidase-like 46-l...    55   2e-09
emb|CBI18342.3| unnamed protein product [Vitis vinifera]               47   6e-09
ref|XP_004140366.1| PREDICTED: uncharacterized protein LOC101210...    49   1e-08

>ref|XP_002267656.1| PREDICTED: condensin complex subunit 3 [Vitis vinifera]
            gi|297745068|emb|CBI38660.3| unnamed protein product
            [Vitis vinifera]
          Length = 1036

 Score = 51.6 bits (122), Expect(2) = 3e-10
 Identities = 25/44 (56%), Positives = 32/44 (72%)
 Frame = +3

Query: 1335 LIVEKLMNRGFCSESTEL*RLKQCLFVFFEHYPSLSVNHRASIT 1466
            L + KL+   F +E+ EL RLKQCL VFFEHYPSLS +H+  I+
Sbjct: 706  LFLSKLIILYFSNETKELQRLKQCLSVFFEHYPSLSADHKKCIS 749



 Score = 41.2 bits (95), Expect(2) = 3e-10
 Identities = 18/24 (75%), Positives = 20/24 (83%)
 Frame = +2

Query: 1562 ISKSFIPVMHSMWQGINSNATGSP 1633
            ISKSF+PVM SMW GIN+ A GSP
Sbjct: 748  ISKSFMPVMRSMWPGINTRAGGSP 771


>emb|CAN73007.1| hypothetical protein VITISV_040123 [Vitis vinifera]
          Length = 862

 Score = 50.4 bits (119), Expect(2) = 2e-09
 Identities = 24/40 (60%), Positives = 30/40 (75%)
 Frame = +3

Query: 1335 LIVEKLMNRGFCSESTEL*RLKQCLFVFFEHYPSLSVNHR 1454
            L + KL+   F +E+ EL RLKQCL VFFEHYPSLS +H+
Sbjct: 706  LFLSKLIILYFSNETKELQRLKQCLSVFFEHYPSLSADHK 745



 Score = 39.7 bits (91), Expect(2) = 2e-09
 Identities = 17/23 (73%), Positives = 19/23 (82%)
 Frame = +2

Query: 1565 SKSFIPVMHSMWQGINSNATGSP 1633
            SKSF+PVM SMW GIN+ A GSP
Sbjct: 749  SKSFMPVMRSMWPGINTRAGGSP 771


>ref|XP_003633850.1| PREDICTED: serine carboxypeptidase-like 46-like [Vitis vinifera]
           gi|296082864|emb|CBI22165.3| unnamed protein product
           [Vitis vinifera]
          Length = 479

 Score = 55.1 bits (131), Expect(2) = 2e-09
 Identities = 38/112 (33%), Positives = 52/112 (46%), Gaps = 2/112 (1%)
 Frame = +3

Query: 12  DEVGSYTDTGDLLMPICQSLSAIEQSISYRFLGDLHAKLS*KVCDYNEIFLII*VGLCID 191
           +E+G+     DLL+PIC S ++ +Q       G +HA +                     
Sbjct: 267 NEIGNDVRQDDLLLPICLSSNSAQQFKLKGQRGTIHAAI--------------------- 305

Query: 192 PF*VIRCKFI*QFARRT--AVGDPCLSERKYMYLNKPQLQEALNANTTLLPY 341
                        ARRT   + DPCLS+R   YLN PQ+Q+AL+ANTT LPY
Sbjct: 306 -------------ARRTRETIPDPCLSDRILTYLNNPQVQKALHANTTHLPY 344



 Score = 35.0 bits (79), Expect(2) = 2e-09
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = +1

Query: 427 PLSYQKDNTSINMIPLLREILPAHIPILFY 516
           PL YQ DN  +N+IPL+  ++   IPIL +
Sbjct: 352 PLEYQIDNLDMNLIPLIEHLIKEGIPILLF 381


>emb|CBI18342.3| unnamed protein product [Vitis vinifera]
          Length = 455

 Score = 46.6 bits (109), Expect(2) = 6e-09
 Identities = 23/42 (54%), Positives = 30/42 (71%)
 Frame = +3

Query: 1341 VEKLMNRGFCSESTEL*RLKQCLFVFFEHYPSLSVNHRASIT 1466
            + KL+   F +E+ EL RLKQCL VFFEHY SLS +H+  I+
Sbjct: 320  LSKLIILYFSNETKELQRLKQCLSVFFEHYRSLSADHKKCIS 361



 Score = 41.6 bits (96), Expect(2) = 6e-09
 Identities = 18/24 (75%), Positives = 21/24 (87%)
 Frame = +2

Query: 1562 ISKSFIPVMHSMWQGINSNATGSP 1633
            ISKSF+PVM SMW GIN++A GSP
Sbjct: 360  ISKSFMPVMRSMWPGINTSAGGSP 383


>ref|XP_004140366.1| PREDICTED: uncharacterized protein LOC101210176 [Cucumis sativus]
          Length = 1740

 Score = 48.9 bits (115), Expect(2) = 1e-08
 Identities = 25/43 (58%), Positives = 33/43 (76%)
 Frame = +3

Query: 1338 IVEKLMNRGFCSESTEL*RLKQCLFVFFEHYPSLSVNHRASIT 1466
            ++ KL+N  F SE  +L RLKQCL VFFEHYPSL+V+H+  I+
Sbjct: 1414 LLRKLVNVYFSSEK-DLERLKQCLSVFFEHYPSLTVSHKRWIS 1455



 Score = 38.1 bits (87), Expect(2) = 1e-08
 Identities = 15/24 (62%), Positives = 20/24 (83%)
 Frame = +2

Query: 1559 YISKSFIPVMHSMWQGINSNATGS 1630
            +IS+SF+PVM SMW G+N+N  GS
Sbjct: 1453 WISESFVPVMRSMWPGMNNNVGGS 1476


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