BLASTX nr result

ID: Panax21_contig00000893 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000893
         (638 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36966.3| unnamed protein product [Vitis vinifera]               74   2e-11
ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containi...    74   2e-11
ref|XP_002515260.1| pentatricopeptide repeat-containing protein,...    71   1e-10
ref|XP_002301519.1| predicted protein [Populus trichocarpa] gi|2...    69   6e-10
ref|XP_002881173.1| pentatricopeptide repeat-containing protein ...    67   2e-09

>emb|CBI36966.3| unnamed protein product [Vitis vinifera]
          Length = 730

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 36/47 (76%), Positives = 42/47 (89%)
 Frame = +2

Query: 497 KKDNKGSRKEILCILGVFQTMHELEIKPNVVTFSAILNACSCCSSFK 637
           KK+N+G R+EILCIL VF  MHEL+IKPNVVTFSAILNACS C+SF+
Sbjct: 470 KKENRG-RQEILCILAVFHKMHELDIKPNVVTFSAILNACSRCNSFE 515


>ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic [Vitis vinifera]
          Length = 867

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 36/47 (76%), Positives = 42/47 (89%)
 Frame = +2

Query: 497 KKDNKGSRKEILCILGVFQTMHELEIKPNVVTFSAILNACSCCSSFK 637
           KK+N+G R+EILCIL VF  MHEL+IKPNVVTFSAILNACS C+SF+
Sbjct: 607 KKENRG-RQEILCILAVFHKMHELDIKPNVVTFSAILNACSRCNSFE 652


>ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545740|gb|EEF47244.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 878

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 33/40 (82%), Positives = 37/40 (92%)
 Frame = +2

Query: 518 RKEILCILGVFQTMHELEIKPNVVTFSAILNACSCCSSFK 637
           ++EILCILGVFQ MHEL+IKPNVVTFSAILNACS C SF+
Sbjct: 616 KQEILCILGVFQKMHELKIKPNVVTFSAILNACSRCDSFE 655


>ref|XP_002301519.1| predicted protein [Populus trichocarpa] gi|222843245|gb|EEE80792.1|
           predicted protein [Populus trichocarpa]
          Length = 718

 Score = 69.3 bits (168), Expect = 6e-10
 Identities = 33/51 (64%), Positives = 43/51 (84%)
 Frame = +2

Query: 485 RSNEKKDNKGSRKEILCILGVFQTMHELEIKPNVVTFSAILNACSCCSSFK 637
           ++ + K++ G  +E++CILGVF  MHELEIKPNVVTFSAILNACS C+SF+
Sbjct: 494 KAGQAKNSGG--QEMMCILGVFHKMHELEIKPNVVTFSAILNACSRCNSFE 542


>ref|XP_002881173.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297327012|gb|EFH57432.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 917

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 32/46 (69%), Positives = 38/46 (82%)
 Frame = +2

Query: 500 KDNKGSRKEILCILGVFQTMHELEIKPNVVTFSAILNACSCCSSFK 637
           KD K   +E+ CIL VF+ MH+LEIKPNVVTFSAILNACS C+SF+
Sbjct: 647 KDCKEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFE 692