BLASTX nr result
ID: Panax21_contig00000893
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00000893 (638 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI36966.3| unnamed protein product [Vitis vinifera] 74 2e-11 ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containi... 74 2e-11 ref|XP_002515260.1| pentatricopeptide repeat-containing protein,... 71 1e-10 ref|XP_002301519.1| predicted protein [Populus trichocarpa] gi|2... 69 6e-10 ref|XP_002881173.1| pentatricopeptide repeat-containing protein ... 67 2e-09 >emb|CBI36966.3| unnamed protein product [Vitis vinifera] Length = 730 Score = 74.3 bits (181), Expect = 2e-11 Identities = 36/47 (76%), Positives = 42/47 (89%) Frame = +2 Query: 497 KKDNKGSRKEILCILGVFQTMHELEIKPNVVTFSAILNACSCCSSFK 637 KK+N+G R+EILCIL VF MHEL+IKPNVVTFSAILNACS C+SF+ Sbjct: 470 KKENRG-RQEILCILAVFHKMHELDIKPNVVTFSAILNACSRCNSFE 515 >ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400, chloroplastic [Vitis vinifera] Length = 867 Score = 74.3 bits (181), Expect = 2e-11 Identities = 36/47 (76%), Positives = 42/47 (89%) Frame = +2 Query: 497 KKDNKGSRKEILCILGVFQTMHELEIKPNVVTFSAILNACSCCSSFK 637 KK+N+G R+EILCIL VF MHEL+IKPNVVTFSAILNACS C+SF+ Sbjct: 607 KKENRG-RQEILCILAVFHKMHELDIKPNVVTFSAILNACSRCNSFE 652 >ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223545740|gb|EEF47244.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 878 Score = 71.2 bits (173), Expect = 1e-10 Identities = 33/40 (82%), Positives = 37/40 (92%) Frame = +2 Query: 518 RKEILCILGVFQTMHELEIKPNVVTFSAILNACSCCSSFK 637 ++EILCILGVFQ MHEL+IKPNVVTFSAILNACS C SF+ Sbjct: 616 KQEILCILGVFQKMHELKIKPNVVTFSAILNACSRCDSFE 655 >ref|XP_002301519.1| predicted protein [Populus trichocarpa] gi|222843245|gb|EEE80792.1| predicted protein [Populus trichocarpa] Length = 718 Score = 69.3 bits (168), Expect = 6e-10 Identities = 33/51 (64%), Positives = 43/51 (84%) Frame = +2 Query: 485 RSNEKKDNKGSRKEILCILGVFQTMHELEIKPNVVTFSAILNACSCCSSFK 637 ++ + K++ G +E++CILGVF MHELEIKPNVVTFSAILNACS C+SF+ Sbjct: 494 KAGQAKNSGG--QEMMCILGVFHKMHELEIKPNVVTFSAILNACSRCNSFE 542 >ref|XP_002881173.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297327012|gb|EFH57432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 917 Score = 67.4 bits (163), Expect = 2e-09 Identities = 32/46 (69%), Positives = 38/46 (82%) Frame = +2 Query: 500 KDNKGSRKEILCILGVFQTMHELEIKPNVVTFSAILNACSCCSSFK 637 KD K +E+ CIL VF+ MH+LEIKPNVVTFSAILNACS C+SF+ Sbjct: 647 KDCKEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFE 692