BLASTX nr result
ID: Panax21_contig00000877
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00000877 (1179 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABK96663.1| unknown [Populus trichocarpa x Populus deltoides] 479 e-133 ref|XP_002330044.1| predicted protein [Populus trichocarpa] gi|2... 477 e-132 ref|XP_002278318.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 474 e-131 ref|XP_002330040.1| predicted protein [Populus trichocarpa] gi|2... 466 e-129 emb|CAN77581.1| hypothetical protein VITISV_015347 [Vitis vinifera] 453 e-125 >gb|ABK96663.1| unknown [Populus trichocarpa x Populus deltoides] Length = 481 Score = 479 bits (1233), Expect = e-133 Identities = 256/362 (70%), Positives = 275/362 (75%) Frame = -1 Query: 1179 QRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLIIHYEPPNDAETFVHRSGRTGRAGKE 1000 QRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLIIHYE PNDAETFVHRSGRTGRAGKE Sbjct: 125 QRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLIIHYELPNDAETFVHRSGRTGRAGKE 184 Query: 999 GSAILMFTNNQRRMISSLERDVGCKFDFISPPAVEEVLESSAEQVVATLNGVHPESVEFF 820 G+AILMFT++QRR + SLERD GCKF+F+SPPA+EEVLESSAEQVVATL+GVHPESVEFF Sbjct: 185 GTAILMFTSSQRRTVRSLERDAGCKFEFVSPPAIEEVLESSAEQVVATLSGVHPESVEFF 244 Query: 819 TPTAQKLIDERGTSALAAAIAQLSGFSRPPSSRSLISYEQGKVTLQLTRDPAYARGFLSA 640 TPTAQKLI+E+GT+ALAAA+A LSGFS+PPSSRSLIS+EQG TLQLTRDP Y+RGFLSA Sbjct: 245 TPTAQKLIEEQGTNALAAALAHLSGFSQPPSSRSLISHEQGWATLQLTRDPTYSRGFLSA 304 Query: 639 GSVIGFLSSVYTTAADEIGKIHIIADPRVQGAVFDLPEEIAKELLNKQIPPGNTISKITK 460 SV GFLS VY AADE+GKIH+IAD RVQGAVFDLPEEIAKELLNKQIPPGNTI+KITK Sbjct: 305 RSVTGFLSDVYPAAADEVGKIHVIADERVQGAVFDLPEEIAKELLNKQIPPGNTIAKITK 364 Query: 459 LPALQDDGPANDNYGRFSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 280 LPALQDDGP D YGRFS+ Sbjct: 365 LPALQDDGPPGDFYGRFSS--RDRPARGGPRGQRGGFRSSRGRGSGRDSDDGGTYRRGGR 422 Query: 279 XXXXGNSWSQTSRSSGSDWLISDRRSSRSPSYGNNDRXXXXXXXXXXXXGHRASECPKKL 100 NSWSQ SRSSG DWLI RRSSR PS DR GHRASECP K Sbjct: 423 SNSNENSWSQMSRSSGDDWLIGGRRSSRPPS---RDRSFGGSCFNCGRSGHRASECPNKK 479 Query: 99 GF 94 F Sbjct: 480 DF 481 >ref|XP_002330044.1| predicted protein [Populus trichocarpa] gi|222871469|gb|EEF08600.1| predicted protein [Populus trichocarpa] Length = 775 Score = 477 bits (1227), Expect = e-132 Identities = 255/362 (70%), Positives = 274/362 (75%) Frame = -1 Query: 1179 QRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLIIHYEPPNDAETFVHRSGRTGRAGKE 1000 QRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLIIHYE PNDAETFVHRSGRTGRAGKE Sbjct: 419 QRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLIIHYELPNDAETFVHRSGRTGRAGKE 478 Query: 999 GSAILMFTNNQRRMISSLERDVGCKFDFISPPAVEEVLESSAEQVVATLNGVHPESVEFF 820 G+AILMFT++QRR + SLERD GCKF+F+SPPA+EEVLESSAEQVVATL+GVHPESVEFF Sbjct: 479 GTAILMFTSSQRRTVRSLERDAGCKFEFVSPPAIEEVLESSAEQVVATLSGVHPESVEFF 538 Query: 819 TPTAQKLIDERGTSALAAAIAQLSGFSRPPSSRSLISYEQGKVTLQLTRDPAYARGFLSA 640 TPTAQKLI+E+GT+ALAAA+A LSGFS+PPSSRSLIS+ QG TLQLTRDP Y+RGFLSA Sbjct: 539 TPTAQKLIEEQGTNALAAALAHLSGFSQPPSSRSLISHAQGWATLQLTRDPTYSRGFLSA 598 Query: 639 GSVIGFLSSVYTTAADEIGKIHIIADPRVQGAVFDLPEEIAKELLNKQIPPGNTISKITK 460 SV GFLS VY AADE+GKIH+IAD RVQGAVFDLPEEIAKELLNKQIPPGNTI+KITK Sbjct: 599 RSVTGFLSDVYPAAADEVGKIHVIADERVQGAVFDLPEEIAKELLNKQIPPGNTIAKITK 658 Query: 459 LPALQDDGPANDNYGRFSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 280 LPALQDDGP D YGRFS+ Sbjct: 659 LPALQDDGPPGDFYGRFSS--RDRPARGGPRGQRGGFRSSRGRGSGRDSDDGGTYRRGGR 716 Query: 279 XXXXGNSWSQTSRSSGSDWLISDRRSSRSPSYGNNDRXXXXXXXXXXXXGHRASECPKKL 100 NSWSQ SRSSG DWLI RRSSR PS DR GHRASECP K Sbjct: 717 SNSNENSWSQMSRSSGDDWLIGGRRSSRPPS---RDRSFGGSCFNCGRSGHRASECPNKK 773 Query: 99 GF 94 F Sbjct: 774 DF 775 >ref|XP_002278318.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Vitis vinifera] gi|296089875|emb|CBI39694.3| unnamed protein product [Vitis vinifera] Length = 764 Score = 474 bits (1220), Expect = e-131 Identities = 250/360 (69%), Positives = 275/360 (76%), Gaps = 1/360 (0%) Frame = -1 Query: 1179 QRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLIIHYEPPNDAETFVHRSGRTGRAGKE 1000 QRERTLNGFRQGKFTVLVATDVA+RGLDIPNVDLIIHYE PND ETFVHRSGRTGRAGKE Sbjct: 402 QRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKE 461 Query: 999 GSAILMFTNNQRRMISSLERDVGCKFDFISPPAVEEVLESSAEQVVATLNGVHPESVEFF 820 G+AILMFT++QRR + SLERDVGCKF+FISPPA+EEVLESSAEQVVATLNGVHPESVEFF Sbjct: 462 GTAILMFTSSQRRTVKSLERDVGCKFEFISPPAIEEVLESSAEQVVATLNGVHPESVEFF 521 Query: 819 TPTAQKLIDERGTSALAAAIAQLSGFSRPPSSRSLISYEQGKVTLQLTRDPAYARGFLSA 640 TPTAQKLI+E+GT ALAAA+A LSGFS+PPS RSLIS+EQG VTLQLTRD Y+RGFLSA Sbjct: 522 TPTAQKLIEEKGTGALAAALAHLSGFSQPPSFRSLISHEQGWVTLQLTRDSGYSRGFLSA 581 Query: 639 GSVIGFLSSVYTTAADEIGKIHIIADPRVQGAVFDLPEEIAKELLNKQIPPGNTISKITK 460 SV GFLS VY TAADE+GKI+++AD RVQGAVFDLPEEIAKELLNKQ+PPGNTISKITK Sbjct: 582 RSVTGFLSDVYPTAADELGKIYLVADERVQGAVFDLPEEIAKELLNKQMPPGNTISKITK 641 Query: 459 LPALQDDGPANDNYGRFSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 280 LPALQDDGPA D YGRFSN Sbjct: 642 LPALQDDGPAGDYYGRFSNRDRSSRGGSRERRGSRISRGRGSSWGSDDDGGDDLNRRGGR 701 Query: 279 XXXXGNSWSQTSRSSGSDWLISDRRSSR-SPSYGNNDRXXXXXXXXXXXXGHRASECPKK 103 N+WS+ R+S DWLI RRS+R S S+G+ +R GHRASECP K Sbjct: 702 SFRSNNNWSRNLRTSEDDWLIGGRRSNRSSSSFGSRERSFGGSCFTCGRSGHRASECPNK 761 >ref|XP_002330040.1| predicted protein [Populus trichocarpa] gi|222871465|gb|EEF08596.1| predicted protein [Populus trichocarpa] Length = 735 Score = 466 bits (1198), Expect = e-129 Identities = 249/357 (69%), Positives = 267/357 (74%) Frame = -1 Query: 1179 QRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLIIHYEPPNDAETFVHRSGRTGRAGKE 1000 QRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLIIHYE PND ETFVHRSGRTGRAGKE Sbjct: 382 QRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKE 441 Query: 999 GSAILMFTNNQRRMISSLERDVGCKFDFISPPAVEEVLESSAEQVVATLNGVHPESVEFF 820 G+AILMFTN+QRR + SLERD GCKF+F+SPPA+EE+LESS EQVVATLNGVHPESVEFF Sbjct: 442 GTAILMFTNSQRRTVRSLERDAGCKFEFVSPPAIEELLESSTEQVVATLNGVHPESVEFF 501 Query: 819 TPTAQKLIDERGTSALAAAIAQLSGFSRPPSSRSLISYEQGKVTLQLTRDPAYARGFLSA 640 TPTAQKLI+E+GTSALAAA+A LSGFSRPPSSRSLIS+EQG TLQLTRDP Y+RGFLSA Sbjct: 502 TPTAQKLIEEQGTSALAAALAHLSGFSRPPSSRSLISHEQGWTTLQLTRDPTYSRGFLSA 561 Query: 639 GSVIGFLSSVYTTAADEIGKIHIIADPRVQGAVFDLPEEIAKELLNKQIPPGNTISKITK 460 SV GFLS VY AADEIGKIH+IAD RVQGAVFDLPEEIAKELLNKQ+PPGNTI KITK Sbjct: 562 RSVTGFLSDVYPAAADEIGKIHLIADERVQGAVFDLPEEIAKELLNKQLPPGNTIEKITK 621 Query: 459 LPALQDDGPANDNYGRFSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 280 LPALQDDGP +D YGRFS+ Sbjct: 622 LPALQDDGPPSDFYGRFSSRDRPARGGPRGQRGGFRSSRGQGSGRYSDDEGTNRRGGRSN 681 Query: 279 XXXXGNSWSQTSRSSGSDWLISDRRSSRSPSYGNNDRXXXXXXXXXXXXGHRASECP 109 SW SRSSG DWL+ RRSSR S + R GHRASECP Sbjct: 682 SNENTRSW--MSRSSGDDWLVGGRRSSRPSS--RDSRSFGGSCFNCGRSGHRASECP 734 >emb|CAN77581.1| hypothetical protein VITISV_015347 [Vitis vinifera] Length = 786 Score = 453 bits (1166), Expect = e-125 Identities = 241/347 (69%), Positives = 266/347 (76%), Gaps = 10/347 (2%) Frame = -1 Query: 1179 QRERTLNGFRQGKFTVLVATDVASRGLDIPNVDL---------IIHYEPPNDAETFVHRS 1027 QRERTLNGFRQGKFTVLVATDVA+RGLDIPNVDL IIHYE PND ETFVHRS Sbjct: 440 QRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLKYVDLLFLQIIHYELPNDPETFVHRS 499 Query: 1026 GRTGRAGKEGSAILMFTNNQRRMISSLERDVGCKFDFISPPAVEEVLESSAEQVVATLNG 847 GRTGRAGKEG+AILMFT++QRR + SLERDVGCKF+FISPPA+EEVLESSAEQVVATLNG Sbjct: 500 GRTGRAGKEGTAILMFTSSQRRTVKSLERDVGCKFEFISPPAIEEVLESSAEQVVATLNG 559 Query: 846 VHPESVEFFTPTAQKLIDERGTSALAAAIAQLSGFSRPPSSRSLISYEQGKVTLQLTRDP 667 VHPESVEFFTPTAQKLI+E+GT ALAAA+A LSGFS+PPS RSLIS+EQG VTLQLTRD Sbjct: 560 VHPESVEFFTPTAQKLIEEKGTGALAAALAHLSGFSQPPSFRSLISHEQGWVTLQLTRDS 619 Query: 666 AYARGFLSAGSVIGFLSSVYTTAADEIGKIHIIADPRVQGAVFDLPEEIAKELLNKQIPP 487 Y+RGFLSA SV GFLS VY TAADE+GKI+++AD RVQGAVFDLPEEIAKELLNKQ+PP Sbjct: 620 GYSRGFLSARSVTGFLSDVYPTAADELGKIYLVADERVQGAVFDLPEEIAKELLNKQMPP 679 Query: 486 GNTISKITKLPALQDDGPANDNYGRFSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 307 GNTISKITKLPALQDDGPA D YGRFSN Sbjct: 680 GNTISKITKLPALQDDGPAGDYYGRFSNRDRSSRGGSRERRGSRISRGRGSSWGSDDDGG 739 Query: 306 XXXXXXXXXXXXXGNSWSQTSRSSGSDWLISDRRSSR-SPSYGNNDR 169 N+WS+ R+S DWLI RRS+R S S+G+ +R Sbjct: 740 DDLNRRGGRSFRSNNNWSRNLRTSEDDWLIGGRRSNRSSSSFGSRER 786