BLASTX nr result

ID: Panax21_contig00000877 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000877
         (1179 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK96663.1| unknown [Populus trichocarpa x Populus deltoides]      479   e-133
ref|XP_002330044.1| predicted protein [Populus trichocarpa] gi|2...   477   e-132
ref|XP_002278318.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   474   e-131
ref|XP_002330040.1| predicted protein [Populus trichocarpa] gi|2...   466   e-129
emb|CAN77581.1| hypothetical protein VITISV_015347 [Vitis vinifera]   453   e-125

>gb|ABK96663.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 481

 Score =  479 bits (1233), Expect = e-133
 Identities = 256/362 (70%), Positives = 275/362 (75%)
 Frame = -1

Query: 1179 QRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLIIHYEPPNDAETFVHRSGRTGRAGKE 1000
            QRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLIIHYE PNDAETFVHRSGRTGRAGKE
Sbjct: 125  QRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLIIHYELPNDAETFVHRSGRTGRAGKE 184

Query: 999  GSAILMFTNNQRRMISSLERDVGCKFDFISPPAVEEVLESSAEQVVATLNGVHPESVEFF 820
            G+AILMFT++QRR + SLERD GCKF+F+SPPA+EEVLESSAEQVVATL+GVHPESVEFF
Sbjct: 185  GTAILMFTSSQRRTVRSLERDAGCKFEFVSPPAIEEVLESSAEQVVATLSGVHPESVEFF 244

Query: 819  TPTAQKLIDERGTSALAAAIAQLSGFSRPPSSRSLISYEQGKVTLQLTRDPAYARGFLSA 640
            TPTAQKLI+E+GT+ALAAA+A LSGFS+PPSSRSLIS+EQG  TLQLTRDP Y+RGFLSA
Sbjct: 245  TPTAQKLIEEQGTNALAAALAHLSGFSQPPSSRSLISHEQGWATLQLTRDPTYSRGFLSA 304

Query: 639  GSVIGFLSSVYTTAADEIGKIHIIADPRVQGAVFDLPEEIAKELLNKQIPPGNTISKITK 460
             SV GFLS VY  AADE+GKIH+IAD RVQGAVFDLPEEIAKELLNKQIPPGNTI+KITK
Sbjct: 305  RSVTGFLSDVYPAAADEVGKIHVIADERVQGAVFDLPEEIAKELLNKQIPPGNTIAKITK 364

Query: 459  LPALQDDGPANDNYGRFSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 280
            LPALQDDGP  D YGRFS+                                         
Sbjct: 365  LPALQDDGPPGDFYGRFSS--RDRPARGGPRGQRGGFRSSRGRGSGRDSDDGGTYRRGGR 422

Query: 279  XXXXGNSWSQTSRSSGSDWLISDRRSSRSPSYGNNDRXXXXXXXXXXXXGHRASECPKKL 100
                 NSWSQ SRSSG DWLI  RRSSR PS    DR            GHRASECP K 
Sbjct: 423  SNSNENSWSQMSRSSGDDWLIGGRRSSRPPS---RDRSFGGSCFNCGRSGHRASECPNKK 479

Query: 99   GF 94
             F
Sbjct: 480  DF 481


>ref|XP_002330044.1| predicted protein [Populus trichocarpa] gi|222871469|gb|EEF08600.1|
            predicted protein [Populus trichocarpa]
          Length = 775

 Score =  477 bits (1227), Expect = e-132
 Identities = 255/362 (70%), Positives = 274/362 (75%)
 Frame = -1

Query: 1179 QRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLIIHYEPPNDAETFVHRSGRTGRAGKE 1000
            QRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLIIHYE PNDAETFVHRSGRTGRAGKE
Sbjct: 419  QRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLIIHYELPNDAETFVHRSGRTGRAGKE 478

Query: 999  GSAILMFTNNQRRMISSLERDVGCKFDFISPPAVEEVLESSAEQVVATLNGVHPESVEFF 820
            G+AILMFT++QRR + SLERD GCKF+F+SPPA+EEVLESSAEQVVATL+GVHPESVEFF
Sbjct: 479  GTAILMFTSSQRRTVRSLERDAGCKFEFVSPPAIEEVLESSAEQVVATLSGVHPESVEFF 538

Query: 819  TPTAQKLIDERGTSALAAAIAQLSGFSRPPSSRSLISYEQGKVTLQLTRDPAYARGFLSA 640
            TPTAQKLI+E+GT+ALAAA+A LSGFS+PPSSRSLIS+ QG  TLQLTRDP Y+RGFLSA
Sbjct: 539  TPTAQKLIEEQGTNALAAALAHLSGFSQPPSSRSLISHAQGWATLQLTRDPTYSRGFLSA 598

Query: 639  GSVIGFLSSVYTTAADEIGKIHIIADPRVQGAVFDLPEEIAKELLNKQIPPGNTISKITK 460
             SV GFLS VY  AADE+GKIH+IAD RVQGAVFDLPEEIAKELLNKQIPPGNTI+KITK
Sbjct: 599  RSVTGFLSDVYPAAADEVGKIHVIADERVQGAVFDLPEEIAKELLNKQIPPGNTIAKITK 658

Query: 459  LPALQDDGPANDNYGRFSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 280
            LPALQDDGP  D YGRFS+                                         
Sbjct: 659  LPALQDDGPPGDFYGRFSS--RDRPARGGPRGQRGGFRSSRGRGSGRDSDDGGTYRRGGR 716

Query: 279  XXXXGNSWSQTSRSSGSDWLISDRRSSRSPSYGNNDRXXXXXXXXXXXXGHRASECPKKL 100
                 NSWSQ SRSSG DWLI  RRSSR PS    DR            GHRASECP K 
Sbjct: 717  SNSNENSWSQMSRSSGDDWLIGGRRSSRPPS---RDRSFGGSCFNCGRSGHRASECPNKK 773

Query: 99   GF 94
             F
Sbjct: 774  DF 775


>ref|XP_002278318.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic
            [Vitis vinifera] gi|296089875|emb|CBI39694.3| unnamed
            protein product [Vitis vinifera]
          Length = 764

 Score =  474 bits (1220), Expect = e-131
 Identities = 250/360 (69%), Positives = 275/360 (76%), Gaps = 1/360 (0%)
 Frame = -1

Query: 1179 QRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLIIHYEPPNDAETFVHRSGRTGRAGKE 1000
            QRERTLNGFRQGKFTVLVATDVA+RGLDIPNVDLIIHYE PND ETFVHRSGRTGRAGKE
Sbjct: 402  QRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKE 461

Query: 999  GSAILMFTNNQRRMISSLERDVGCKFDFISPPAVEEVLESSAEQVVATLNGVHPESVEFF 820
            G+AILMFT++QRR + SLERDVGCKF+FISPPA+EEVLESSAEQVVATLNGVHPESVEFF
Sbjct: 462  GTAILMFTSSQRRTVKSLERDVGCKFEFISPPAIEEVLESSAEQVVATLNGVHPESVEFF 521

Query: 819  TPTAQKLIDERGTSALAAAIAQLSGFSRPPSSRSLISYEQGKVTLQLTRDPAYARGFLSA 640
            TPTAQKLI+E+GT ALAAA+A LSGFS+PPS RSLIS+EQG VTLQLTRD  Y+RGFLSA
Sbjct: 522  TPTAQKLIEEKGTGALAAALAHLSGFSQPPSFRSLISHEQGWVTLQLTRDSGYSRGFLSA 581

Query: 639  GSVIGFLSSVYTTAADEIGKIHIIADPRVQGAVFDLPEEIAKELLNKQIPPGNTISKITK 460
             SV GFLS VY TAADE+GKI+++AD RVQGAVFDLPEEIAKELLNKQ+PPGNTISKITK
Sbjct: 582  RSVTGFLSDVYPTAADELGKIYLVADERVQGAVFDLPEEIAKELLNKQMPPGNTISKITK 641

Query: 459  LPALQDDGPANDNYGRFSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 280
            LPALQDDGPA D YGRFSN                                         
Sbjct: 642  LPALQDDGPAGDYYGRFSNRDRSSRGGSRERRGSRISRGRGSSWGSDDDGGDDLNRRGGR 701

Query: 279  XXXXGNSWSQTSRSSGSDWLISDRRSSR-SPSYGNNDRXXXXXXXXXXXXGHRASECPKK 103
                 N+WS+  R+S  DWLI  RRS+R S S+G+ +R            GHRASECP K
Sbjct: 702  SFRSNNNWSRNLRTSEDDWLIGGRRSNRSSSSFGSRERSFGGSCFTCGRSGHRASECPNK 761


>ref|XP_002330040.1| predicted protein [Populus trichocarpa] gi|222871465|gb|EEF08596.1|
            predicted protein [Populus trichocarpa]
          Length = 735

 Score =  466 bits (1198), Expect = e-129
 Identities = 249/357 (69%), Positives = 267/357 (74%)
 Frame = -1

Query: 1179 QRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLIIHYEPPNDAETFVHRSGRTGRAGKE 1000
            QRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLIIHYE PND ETFVHRSGRTGRAGKE
Sbjct: 382  QRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKE 441

Query: 999  GSAILMFTNNQRRMISSLERDVGCKFDFISPPAVEEVLESSAEQVVATLNGVHPESVEFF 820
            G+AILMFTN+QRR + SLERD GCKF+F+SPPA+EE+LESS EQVVATLNGVHPESVEFF
Sbjct: 442  GTAILMFTNSQRRTVRSLERDAGCKFEFVSPPAIEELLESSTEQVVATLNGVHPESVEFF 501

Query: 819  TPTAQKLIDERGTSALAAAIAQLSGFSRPPSSRSLISYEQGKVTLQLTRDPAYARGFLSA 640
            TPTAQKLI+E+GTSALAAA+A LSGFSRPPSSRSLIS+EQG  TLQLTRDP Y+RGFLSA
Sbjct: 502  TPTAQKLIEEQGTSALAAALAHLSGFSRPPSSRSLISHEQGWTTLQLTRDPTYSRGFLSA 561

Query: 639  GSVIGFLSSVYTTAADEIGKIHIIADPRVQGAVFDLPEEIAKELLNKQIPPGNTISKITK 460
             SV GFLS VY  AADEIGKIH+IAD RVQGAVFDLPEEIAKELLNKQ+PPGNTI KITK
Sbjct: 562  RSVTGFLSDVYPAAADEIGKIHLIADERVQGAVFDLPEEIAKELLNKQLPPGNTIEKITK 621

Query: 459  LPALQDDGPANDNYGRFSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 280
            LPALQDDGP +D YGRFS+                                         
Sbjct: 622  LPALQDDGPPSDFYGRFSSRDRPARGGPRGQRGGFRSSRGQGSGRYSDDEGTNRRGGRSN 681

Query: 279  XXXXGNSWSQTSRSSGSDWLISDRRSSRSPSYGNNDRXXXXXXXXXXXXGHRASECP 109
                  SW   SRSSG DWL+  RRSSR  S   + R            GHRASECP
Sbjct: 682  SNENTRSW--MSRSSGDDWLVGGRRSSRPSS--RDSRSFGGSCFNCGRSGHRASECP 734


>emb|CAN77581.1| hypothetical protein VITISV_015347 [Vitis vinifera]
          Length = 786

 Score =  453 bits (1166), Expect = e-125
 Identities = 241/347 (69%), Positives = 266/347 (76%), Gaps = 10/347 (2%)
 Frame = -1

Query: 1179 QRERTLNGFRQGKFTVLVATDVASRGLDIPNVDL---------IIHYEPPNDAETFVHRS 1027
            QRERTLNGFRQGKFTVLVATDVA+RGLDIPNVDL         IIHYE PND ETFVHRS
Sbjct: 440  QRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLKYVDLLFLQIIHYELPNDPETFVHRS 499

Query: 1026 GRTGRAGKEGSAILMFTNNQRRMISSLERDVGCKFDFISPPAVEEVLESSAEQVVATLNG 847
            GRTGRAGKEG+AILMFT++QRR + SLERDVGCKF+FISPPA+EEVLESSAEQVVATLNG
Sbjct: 500  GRTGRAGKEGTAILMFTSSQRRTVKSLERDVGCKFEFISPPAIEEVLESSAEQVVATLNG 559

Query: 846  VHPESVEFFTPTAQKLIDERGTSALAAAIAQLSGFSRPPSSRSLISYEQGKVTLQLTRDP 667
            VHPESVEFFTPTAQKLI+E+GT ALAAA+A LSGFS+PPS RSLIS+EQG VTLQLTRD 
Sbjct: 560  VHPESVEFFTPTAQKLIEEKGTGALAAALAHLSGFSQPPSFRSLISHEQGWVTLQLTRDS 619

Query: 666  AYARGFLSAGSVIGFLSSVYTTAADEIGKIHIIADPRVQGAVFDLPEEIAKELLNKQIPP 487
             Y+RGFLSA SV GFLS VY TAADE+GKI+++AD RVQGAVFDLPEEIAKELLNKQ+PP
Sbjct: 620  GYSRGFLSARSVTGFLSDVYPTAADELGKIYLVADERVQGAVFDLPEEIAKELLNKQMPP 679

Query: 486  GNTISKITKLPALQDDGPANDNYGRFSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 307
            GNTISKITKLPALQDDGPA D YGRFSN                                
Sbjct: 680  GNTISKITKLPALQDDGPAGDYYGRFSNRDRSSRGGSRERRGSRISRGRGSSWGSDDDGG 739

Query: 306  XXXXXXXXXXXXXGNSWSQTSRSSGSDWLISDRRSSR-SPSYGNNDR 169
                          N+WS+  R+S  DWLI  RRS+R S S+G+ +R
Sbjct: 740  DDLNRRGGRSFRSNNNWSRNLRTSEDDWLIGGRRSNRSSSSFGSRER 786


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