BLASTX nr result

ID: Panax21_contig00000876 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000876
         (1420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding prote...   377   e-135
ref|XP_002510266.1| nuclear acid binding protein, putative [Rici...   378   e-134
ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding prote...   367   e-132
emb|CAC69852.1| nucleic acid binding protein [Nicotiana tabacum]      390   e-131
ref|XP_003544447.1| PREDICTED: uncharacterized RNA-binding prote...   362   e-131

>ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
           isoform 2 [Vitis vinifera]
          Length = 418

 Score =  377 bits (968), Expect(2) = e-135
 Identities = 188/228 (82%), Positives = 200/228 (87%)
 Frame = -1

Query: 955 ENRTIWVGDLHNWMDEDYLRSCFASTGEVASIKVIRNKQTGFSEGYGFVEFFSHAAAEKV 776
           +NRTIWVGDLHNWMDE+YL SCFA+TGE+AS+KVIRNKQTG SEGYGFVEFFSHAAAEKV
Sbjct: 82  DNRTIWVGDLHNWMDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSHAAAEKV 141

Query: 775 LQSYACIAMPNTEQPFRLNWATFSMGDKRSNNGSDLSIFVGDLASDVTDTLLHETFATKY 596
           LQ YA + MPNT+QPFRLNWATFSMGDKRS+NG DLSIFVGDLASDV+D+LLHETFA KY
Sbjct: 142 LQGYAGVLMPNTDQPFRLNWATFSMGDKRSDNGPDLSIFVGDLASDVSDSLLHETFAGKY 201

Query: 595 PSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMNGAYCSSRAMRIGAATPRKXXX 416
           PSVKAAKVV DANTGRSKGYGFVRFGD+NERSQAMTEMNG YCSSR MRIGAATPRK   
Sbjct: 202 PSVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGAATPRKSSG 261

Query: 415 XXXXXXXXXXYVSNGAPASQHDGDSTNTTIFVGGLDPNVSDEDLRQPF 272
                     Y SNGA + Q DGDS NTTIFVGGLDPNVSDEDLRQPF
Sbjct: 262 YQQQYSSHGGYASNGA-SVQSDGDSMNTTIFVGGLDPNVSDEDLRQPF 308



 Score =  133 bits (335), Expect(2) = e-135
 Identities = 65/92 (70%), Positives = 74/92 (80%), Gaps = 1/92 (1%)
 Frame = -3

Query: 275 FSQFGEVVSVKIPAGKGCGFVQFANRTSAEEALQKLNGTLIGKQTVRLSWGRNPANKQFR 96
           FSQ+GE+VSVKIP GKGCGFVQFANR +AE+ALQKLNGT+IGKQTVRLSWGRNPANKQ R
Sbjct: 308 FSQYGEIVSVKIPVGKGCGFVQFANRNNAEDALQKLNGTVIGKQTVRLSWGRNPANKQMR 367

Query: 95  ADYGNQWTXXXXXXXXXXXXXYAM-LPHDPSM 3
           AD+GNQW+             YA+  PHDP+M
Sbjct: 368 ADFGNQWSGAYYGGQVYDGYGYALPPPHDPTM 399



 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 53/194 (27%), Positives = 88/194 (45%), Gaps = 20/194 (10%)
 Frame = -1

Query: 967 SGGGENRTIWVGDLHNWMDEDYLRSCFAST-GEVASIKVIRNKQTGFSEGYGFVEFFSHA 791
           S  G + +I+VGDL + + +  L   FA     V + KV+ +  TG S+GYGFV F    
Sbjct: 171 SDNGPDLSIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVRFGDEN 230

Query: 790 AAEKVLQSYACIAMPNTEQPFRLNWAT-----------FSMGDKRSNNGS--------DL 668
              + +     +    + +P R+  AT            S G   SN  S        + 
Sbjct: 231 ERSQAMTEMNGVYC--SSRPMRIGAATPRKSSGYQQQYSSHGGYASNGASVQSDGDSMNT 288

Query: 667 SIFVGDLASDVTDTLLHETFATKYPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMT 488
           +IFVG L  +V+D  L + F+ +Y  + + K+ +       KG GFV+F + N    A+ 
Sbjct: 289 TIFVGGLDPNVSDEDLRQPFS-QYGEIVSVKIPV------GKGCGFVQFANRNNAEDALQ 341

Query: 487 EMNGAYCSSRAMRI 446
           ++NG     + +R+
Sbjct: 342 KLNGTVIGKQTVRL 355


>ref|XP_002510266.1| nuclear acid binding protein, putative [Ricinus communis]
           gi|223550967|gb|EEF52453.1| nuclear acid binding
           protein, putative [Ricinus communis]
          Length = 443

 Score =  378 bits (970), Expect(2) = e-134
 Identities = 187/235 (79%), Positives = 204/235 (86%), Gaps = 2/235 (0%)
 Frame = -1

Query: 970 GSGGGENRTIWVGDLHNWMDEDYLRSCFASTGEVASIKVIRNKQTGFSEGYGFVEFFSHA 791
           G GGGENRT+W+GDLH+WMDE+YL +CFASTGE+ SIKVIRNKQTG SEGYGFVEF++HA
Sbjct: 102 GGGGGENRTVWIGDLHHWMDENYLHTCFASTGEIVSIKVIRNKQTGLSEGYGFVEFYTHA 161

Query: 790 AAEKVLQSYACIAMPNTEQPFRLNWATFSMGDKRSNNGSDLSIFVGDLASDVTDTLLHET 611
            AEKVLQ+YA I MPNTEQPFRLNWATFS GDKRS+N  DLSIFVGDLA+DVTD+LLHET
Sbjct: 162 TAEKVLQNYAGILMPNTEQPFRLNWATFSTGDKRSDNAPDLSIFVGDLAADVTDSLLHET 221

Query: 610 FATKYPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMNGAYCSSRAMRIGAATP 431
           F ++YPSVKAAKVV DANTGRSKGYGFVRFGDDNER+QAMTEMNG YCSSRAMRIGAATP
Sbjct: 222 FVSRYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERTQAMTEMNGVYCSSRAMRIGAATP 281

Query: 430 RKXXXXXXXXXXXXXYVSNGA--PASQHDGDSTNTTIFVGGLDPNVSDEDLRQPF 272
           RK             YVSNGA   A Q DGDSTNTTIFVGGLDPNV+DEDL+QPF
Sbjct: 282 RK----STGYQHQGGYVSNGASGQAFQADGDSTNTTIFVGGLDPNVTDEDLKQPF 332



 Score =  127 bits (319), Expect(2) = e-134
 Identities = 65/93 (69%), Positives = 74/93 (79%), Gaps = 2/93 (2%)
 Frame = -3

Query: 275 FSQFGEVVSVKIPAGKGCGFVQFANRTSAEEALQKLNGTLIGKQTVRLSWGRNPANK-QF 99
           FSQ+GE+VSVKIP GKGCGFVQFA+R++AEEALQKLNGT+IGKQTVRLSWGRNPANK Q 
Sbjct: 332 FSQYGEIVSVKIPVGKGCGFVQFASRSNAEEALQKLNGTVIGKQTVRLSWGRNPANKQQL 391

Query: 98  RADYGNQWTXXXXXXXXXXXXXYAM-LPHDPSM 3
           R+D+GNQW              YA+  PHDPSM
Sbjct: 392 RSDFGNQWGGAYYGGQIYDGYGYALPPPHDPSM 424


>ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
           isoform 1 [Vitis vinifera]
          Length = 409

 Score =  367 bits (942), Expect(2) = e-132
 Identities = 183/228 (80%), Positives = 195/228 (85%)
 Frame = -1

Query: 955 ENRTIWVGDLHNWMDEDYLRSCFASTGEVASIKVIRNKQTGFSEGYGFVEFFSHAAAEKV 776
           +NRTIWVGDLHNWMDE+YL SCFA+TGE+AS+KVIRNKQTG SEGYGFVEFFSHAAAEKV
Sbjct: 82  DNRTIWVGDLHNWMDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSHAAAEKV 141

Query: 775 LQSYACIAMPNTEQPFRLNWATFSMGDKRSNNGSDLSIFVGDLASDVTDTLLHETFATKY 596
           LQ YA + MPNT+QPFRLNWATFSMGDKRS+NG DLSIFVGDLASDV+D+LLHETFA KY
Sbjct: 142 LQGYAGVLMPNTDQPFRLNWATFSMGDKRSDNGPDLSIFVGDLASDVSDSLLHETFAGKY 201

Query: 595 PSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMNGAYCSSRAMRIGAATPRKXXX 416
           PSVKAAKVV DANTGRSKGYGFVRFGD+NERSQAMTEMNG YCSSR MRIGAATPRK   
Sbjct: 202 PSVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGAATPRKSSG 261

Query: 415 XXXXXXXXXXYVSNGAPASQHDGDSTNTTIFVGGLDPNVSDEDLRQPF 272
                          +   Q DGDS NTTIFVGGLDPNVSDEDLRQPF
Sbjct: 262 YQ----------QQYSSHVQSDGDSMNTTIFVGGLDPNVSDEDLRQPF 299



 Score =  133 bits (335), Expect(2) = e-132
 Identities = 65/92 (70%), Positives = 74/92 (80%), Gaps = 1/92 (1%)
 Frame = -3

Query: 275 FSQFGEVVSVKIPAGKGCGFVQFANRTSAEEALQKLNGTLIGKQTVRLSWGRNPANKQFR 96
           FSQ+GE+VSVKIP GKGCGFVQFANR +AE+ALQKLNGT+IGKQTVRLSWGRNPANKQ R
Sbjct: 299 FSQYGEIVSVKIPVGKGCGFVQFANRNNAEDALQKLNGTVIGKQTVRLSWGRNPANKQMR 358

Query: 95  ADYGNQWTXXXXXXXXXXXXXYAM-LPHDPSM 3
           AD+GNQW+             YA+  PHDP+M
Sbjct: 359 ADFGNQWSGAYYGGQVYDGYGYALPPPHDPTM 390



 Score = 65.1 bits (157), Expect = 4e-08
 Identities = 49/185 (26%), Positives = 87/185 (47%), Gaps = 11/185 (5%)
 Frame = -1

Query: 967 SGGGENRTIWVGDLHNWMDEDYLRSCFAST-GEVASIKVIRNKQTGFSEGYGFVEFFSHA 791
           S  G + +I+VGDL + + +  L   FA     V + KV+ +  TG S+GYGFV F    
Sbjct: 171 SDNGPDLSIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVRFGDEN 230

Query: 790 AAEKVLQSYACIAMPNTEQPFRLNWAT----------FSMGDKRSNNGSDLSIFVGDLAS 641
              + +     +    + +P R+  AT          +S   +   +  + +IFVG L  
Sbjct: 231 ERSQAMTEMNGVYC--SSRPMRIGAATPRKSSGYQQQYSSHVQSDGDSMNTTIFVGGLDP 288

Query: 640 DVTDTLLHETFATKYPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMNGAYCSS 461
           +V+D  L + F+ +Y  + + K+ +       KG GFV+F + N    A+ ++NG     
Sbjct: 289 NVSDEDLRQPFS-QYGEIVSVKIPV------GKGCGFVQFANRNNAEDALQKLNGTVIGK 341

Query: 460 RAMRI 446
           + +R+
Sbjct: 342 QTVRL 346


>emb|CAC69852.1| nucleic acid binding protein [Nicotiana tabacum]
          Length = 456

 Score =  390 bits (1001), Expect(2) = e-131
 Identities = 195/234 (83%), Positives = 204/234 (87%), Gaps = 2/234 (0%)
 Frame = -1

Query: 967 SGGGENRTIWVGDLHNWMDEDYLRSCFASTGEVASIKVIRNKQTGFSEGYGFVEFFSHAA 788
           +   ENRTIWVGDL NWMDEDYLR+CFAST EVASIKVIRNKQTGFSEGYGFVEFF+HAA
Sbjct: 111 NNNNENRTIWVGDLLNWMDEDYLRNCFASTNEVASIKVIRNKQTGFSEGYGFVEFFTHAA 170

Query: 787 AEKVLQSYACIAMPNTEQPFRLNWATFSMGDKRSNNGSDLSIFVGDLASDVTDTLLHETF 608
           AEKVLQ+Y+C+ MPN +QPFRLNWATFSMGDKR+NNGSDLSIFVGDLA+DVTDTLLHETF
Sbjct: 171 AEKVLQTYSCMTMPNVDQPFRLNWATFSMGDKRANNGSDLSIFVGDLAADVTDTLLHETF 230

Query: 607 ATKYPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMNGAYCSSRAMRIGAATPR 428
           ATKYPSVKAAKVV DANTGRSKGYGFVRFGDDNERSQAMTEMNG YCSSR MRIGAATPR
Sbjct: 231 ATKYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPR 290

Query: 427 KXXXXXXXXXXXXXYVSNGAPA--SQHDGDSTNTTIFVGGLDPNVSDEDLRQPF 272
           K               SNG PA  SQ D DSTNTTIFVGGLDPNVSDEDLRQPF
Sbjct: 291 K-SSGYQQQYSSQGGYSNGGPAQGSQPDADSTNTTIFVGGLDPNVSDEDLRQPF 343



 Score =  107 bits (267), Expect(2) = e-131
 Identities = 57/92 (61%), Positives = 61/92 (66%), Gaps = 1/92 (1%)
 Frame = -3

Query: 275 FSQFGEVVSVKIPAGKGCGFVQFANRTSAEEALQKLNGTLIGKQTVRLSWGRNPANKQFR 96
           F Q+GE+VSVKIP  +     QFANR  AEEALQKLNGT IGKQTVRL WGRNPANKQ R
Sbjct: 343 FVQYGEIVSVKIPVEERVWVWQFANRNDAEEALQKLNGTFIGKQTVRLFWGRNPANKQSR 402

Query: 95  ADYGNQWTXXXXXXXXXXXXXYAMLP-HDPSM 3
            D+GNQWT             YA  P HDP M
Sbjct: 403 GDFGNQWTGPYYGGHFYDGYGYAFPPQHDPGM 434


>ref|XP_003544447.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
           [Glycine max]
          Length = 425

 Score =  362 bits (930), Expect(2) = e-131
 Identities = 180/230 (78%), Positives = 197/230 (85%)
 Frame = -1

Query: 961 GGENRTIWVGDLHNWMDEDYLRSCFASTGEVASIKVIRNKQTGFSEGYGFVEFFSHAAAE 782
           GGEN+TIW+GDLH+WMDE+YL  CFASTGE++SIKVIRNKQTG SEGYGFVEF+SHA AE
Sbjct: 93  GGENKTIWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAE 152

Query: 781 KVLQSYACIAMPNTEQPFRLNWATFSMGDKRSNNGSDLSIFVGDLASDVTDTLLHETFAT 602
           KVLQ+YA I MPNTEQPFRLNWATFS GDK S+N  DLSIFVGDLA+DVTD+LLHETFA+
Sbjct: 153 KVLQNYAGILMPNTEQPFRLNWATFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFAS 212

Query: 601 KYPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMNGAYCSSRAMRIGAATPRKX 422
            YPSVKAAKVV DANTGRSKGYGFVRFGDDN+R+QAMT+MNG YCSSR MRIGAATPRK 
Sbjct: 213 VYPSVKAAKVVFDANTGRSKGYGFVRFGDDNQRTQAMTQMNGVYCSSRPMRIGAATPRKS 272

Query: 421 XXXXXXXXXXXXYVSNGAPASQHDGDSTNTTIFVGGLDPNVSDEDLRQPF 272
                         SNG  A+Q + DSTNTTIFVGGLDPNVSDEDLRQPF
Sbjct: 273 SGHQQGGQ------SNGT-ANQSEADSTNTTIFVGGLDPNVSDEDLRQPF 315



 Score =  133 bits (335), Expect(2) = e-131
 Identities = 66/92 (71%), Positives = 72/92 (78%), Gaps = 1/92 (1%)
 Frame = -3

Query: 275 FSQFGEVVSVKIPAGKGCGFVQFANRTSAEEALQKLNGTLIGKQTVRLSWGRNPANKQFR 96
           FSQ+GE+VSVKIP GKGCGFVQFANR +AEEALQKLNGT IGKQTVRLSWGRNPANKQFR
Sbjct: 315 FSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTSIGKQTVRLSWGRNPANKQFR 374

Query: 95  ADYGNQWTXXXXXXXXXXXXXYAMLP-HDPSM 3
            D+GN WT             YA+ P HDPS+
Sbjct: 375 MDFGNPWTGAYYGAPMYDGYGYALTPRHDPSI 406



 Score = 62.0 bits (149), Expect = 4e-07
 Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 14/189 (7%)
 Frame = -1

Query: 970 GSGGGENRTIWVGDLHNWMDEDYLRSCFAST-GEVASIKVIRNKQTGFSEGYGFVEFFSH 794
           GS    + +I+VGDL   + +  L   FAS    V + KV+ +  TG S+GYGFV F   
Sbjct: 183 GSDNVPDLSIFVGDLAADVTDSLLHETFASVYPSVKAAKVVFDANTGRSKGYGFVRFGDD 242

Query: 793 AAAEKVLQSYACIAMPNTEQPFRLNWATFSMGDKRSNNG-------------SDLSIFVG 653
               + +     +    + +P R+  AT          G             ++ +IFVG
Sbjct: 243 NQRTQAMTQMNGVYC--SSRPMRIGAATPRKSSGHQQGGQSNGTANQSEADSTNTTIFVG 300

Query: 652 DLASDVTDTLLHETFATKYPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMNGA 473
            L  +V+D  L + F+ +Y  + + K+ +       KG GFV+F + N   +A+ ++NG 
Sbjct: 301 GLDPNVSDEDLRQPFS-QYGEIVSVKIPV------GKGCGFVQFANRNNAEEALQKLNGT 353

Query: 472 YCSSRAMRI 446
               + +R+
Sbjct: 354 SIGKQTVRL 362


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