BLASTX nr result

ID: Panax21_contig00000871 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000871
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309114.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
gb|AFK38244.1| unknown [Lotus japonicus]                               80   2e-13
ref|XP_003516934.1| PREDICTED: ataxin-3 homolog [Glycine max]          80   2e-13
ref|XP_003604579.1| Ataxin-3-like protein [Medicago truncatula] ...    80   2e-13
ref|XP_002277594.1| PREDICTED: ataxin-3 homolog [Vitis vinifera]...    79   3e-13

>ref|XP_002309114.1| predicted protein [Populus trichocarpa] gi|222855090|gb|EEE92637.1|
           predicted protein [Populus trichocarpa]
          Length = 231

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 36/38 (94%), Positives = 37/38 (97%)
 Frame = -3

Query: 399 EMEGPSNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEF 286
           EMEG SNGGMLYHEVQE+KLCAVHCVNTVLQGPFFSEF
Sbjct: 2   EMEGVSNGGMLYHEVQEAKLCAVHCVNTVLQGPFFSEF 39



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 35/53 (66%), Positives = 42/53 (79%), Gaps = 2/53 (3%)
 Frame = -1

Query: 155 QMMLEGG--AAAGGDTFLSEESHNVSMDGDFSIQVLEKALEVWDLQVIPLNNP 3
           QMM EG    ++ GD +LS ESHNVS+ GDFSIQVL+KALEVWDLQVI  ++P
Sbjct: 54  QMMQEGNFFTSSVGD-YLSAESHNVSLGGDFSIQVLQKALEVWDLQVIAFDSP 105


>gb|AFK38244.1| unknown [Lotus japonicus]
          Length = 345

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 36/37 (97%), Positives = 36/37 (97%)
 Frame = -3

Query: 396 MEGPSNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEF 286
           MEG SNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEF
Sbjct: 3   MEGASNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEF 39



 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 36/51 (70%), Positives = 43/51 (84%)
 Frame = -1

Query: 155 QMMLEGGAAAGGDTFLSEESHNVSMDGDFSIQVLEKALEVWDLQVIPLNNP 3
           QMM+    A+G   FLS +SHNVS+DGDFSIQVL+KALEVWDLQVIPL++P
Sbjct: 54  QMMMLPSLASGD--FLSHDSHNVSLDGDFSIQVLQKALEVWDLQVIPLDSP 102


>ref|XP_003516934.1| PREDICTED: ataxin-3 homolog [Glycine max]
          Length = 338

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 36/37 (97%), Positives = 36/37 (97%)
 Frame = -3

Query: 396 MEGPSNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEF 286
           MEG SNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEF
Sbjct: 2   MEGASNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEF 38



 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 29/33 (87%), Positives = 33/33 (100%)
 Frame = -1

Query: 101 ESHNVSMDGDFSIQVLEKALEVWDLQVIPLNNP 3
           ESHNVS+DGDFSIQVL+KALEVWDLQVIPL++P
Sbjct: 65  ESHNVSLDGDFSIQVLQKALEVWDLQVIPLDSP 97


>ref|XP_003604579.1| Ataxin-3-like protein [Medicago truncatula]
           gi|355505634|gb|AES86776.1| Ataxin-3-like protein
           [Medicago truncatula]
          Length = 330

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 36/37 (97%), Positives = 36/37 (97%)
 Frame = -3

Query: 396 MEGPSNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEF 286
           MEG SNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEF
Sbjct: 2   MEGASNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEF 38



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 34/50 (68%), Positives = 41/50 (82%)
 Frame = -1

Query: 152 MMLEGGAAAGGDTFLSEESHNVSMDGDFSIQVLEKALEVWDLQVIPLNNP 3
           MM+   ++A GD F    SHNVS+DGDFSIQVL+KALEVWDLQVIPL++P
Sbjct: 55  MMMPAHSSAAGDLF----SHNVSLDGDFSIQVLQKALEVWDLQVIPLDSP 100


>ref|XP_002277594.1| PREDICTED: ataxin-3 homolog [Vitis vinifera]
           gi|297740255|emb|CBI30437.3| unnamed protein product
           [Vitis vinifera]
          Length = 272

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 35/36 (97%), Positives = 36/36 (100%)
 Frame = -3

Query: 396 MEGPSNGGMLYHEVQESKLCAVHCVNTVLQGPFFSE 289
           MEGPSNGGMLYHEVQESKLCAVHCVNTVLQGPFF+E
Sbjct: 1   MEGPSNGGMLYHEVQESKLCAVHCVNTVLQGPFFTE 36



 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 37/51 (72%), Positives = 43/51 (84%)
 Frame = -1

Query: 155 QMMLEGGAAAGGDTFLSEESHNVSMDGDFSIQVLEKALEVWDLQVIPLNNP 3
           +MML+  A +    FLSE+SHNVSMDGDFSIQVL+KALEVWDLQVIPL+ P
Sbjct: 52  RMMLQPSAPSA--EFLSEDSHNVSMDGDFSIQVLQKALEVWDLQVIPLDCP 100


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