BLASTX nr result

ID: Panax21_contig00000866 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000866
         (2350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325942.1| tubulin folding cofactor [Populus trichocarp...   449   e-123
ref|XP_002275735.1| PREDICTED: tubulin-specific chaperone E [Vit...   439   e-120
ref|XP_002525519.1| tubulin-specific chaperone E, putative [Rici...   418   e-114
emb|CAN61855.1| hypothetical protein VITISV_016688 [Vitis vinifera]   388   e-105
ref|XP_004154663.1| PREDICTED: tubulin-specific chaperone E-like...   381   e-103

>ref|XP_002325942.1| tubulin folding cofactor [Populus trichocarpa]
            gi|222862817|gb|EEF00324.1| tubulin folding cofactor
            [Populus trichocarpa]
          Length = 537

 Score =  449 bits (1155), Expect = e-123
 Identities = 225/320 (70%), Positives = 263/320 (82%)
 Frame = -1

Query: 1531 SLIKLGVSSSGPPSQISAAVPNLKELDLTGNLLSEWKDVGTICNELPALTALNLSYNIMS 1352
            SL  LGVS+ G P++I   VPNLKELDLTGNLLSEWKDVG IC +LP+L ALNLS N MS
Sbjct: 139  SLSYLGVSNPGSPNEIRNIVPNLKELDLTGNLLSEWKDVGIICEQLPSLAALNLSNNSMS 198

Query: 1351 HDLIGLPQLKNIHILVLNNTGLNWEHVEVLQESLPVIEELHLMGNRLREIKTTSSTTVQG 1172
            H+++GLP LK+IHILVLNNTG+NW  +EVL++ LPVIEELHLMGN +  IKT SS+ V G
Sbjct: 199  HEIVGLPLLKSIHILVLNNTGINWTQIEVLKDLLPVIEELHLMGNGINAIKTASSSIVHG 258

Query: 1171 FNSLRLLNLEDNCLTDWNEIVKXXXXXXXXXXXLNKNNLNYIRYPDTDAIHKLLGGYESV 992
            F+SLRLLNLE+NC+ +WNEIVK           LNKNNLN+I YPD D I KL+GG ES 
Sbjct: 259  FDSLRLLNLEENCIAEWNEIVKLSQLRSLEELHLNKNNLNHIFYPDHDTIDKLVGGDESH 318

Query: 991  EKSYVPFQNLRCLLLGGNNIGDLASIDSLNCFPRLVDIRISENPVTEPGKGGISRFILIA 812
            ++S +PFQNLRCLLLGGNNI DLAS+DSLN FP+L+DIR+SENP+ +PG+GGI RF+L+A
Sbjct: 319  DQSCIPFQNLRCLLLGGNNIDDLASVDSLNSFPKLIDIRLSENPIADPGRGGIPRFVLVA 378

Query: 811  RLAKVQILNGSEVSPRERKDSEIRYVRLVMSKFHGNLEEIKQLHPRFSELKVFHGIEDER 632
            RLAKV+ILNGSEVS RERK+SEIRYVRLVMSK HGN +EIKQ HPRF ELK FHGIEDER
Sbjct: 379  RLAKVEILNGSEVSTRERKESEIRYVRLVMSKLHGNPDEIKQ-HPRFVELKNFHGIEDER 437

Query: 631  PSNGAAGPQKMASGLICMYL 572
             S G  GPQKMASGL+ + L
Sbjct: 438  SSVGTTGPQKMASGLLSVTL 457


>ref|XP_002275735.1| PREDICTED: tubulin-specific chaperone E [Vitis vinifera]
            gi|297741006|emb|CBI31318.3| unnamed protein product
            [Vitis vinifera]
          Length = 541

 Score =  439 bits (1128), Expect = e-120
 Identities = 220/320 (68%), Positives = 258/320 (80%)
 Frame = -1

Query: 1531 SLIKLGVSSSGPPSQISAAVPNLKELDLTGNLLSEWKDVGTICNELPALTALNLSYNIMS 1352
            SL  LGVSS G P +I + VPNLKELDLTGNLLSEWKDVGTIC +LP L ALNLS N+M+
Sbjct: 142  SLSYLGVSSIGAPFEICSVVPNLKELDLTGNLLSEWKDVGTICVQLPGLAALNLSNNLMA 201

Query: 1351 HDLIGLPQLKNIHILVLNNTGLNWEHVEVLQESLPVIEELHLMGNRLREIKTTSSTTVQG 1172
            HD+ GLP L N+ +LVLNNTG+ W+ VE+++ SLP IEELHLMGN LR I   SS+ VQG
Sbjct: 202  HDITGLPLLMNLRVLVLNNTGIKWKEVEIIRHSLPAIEELHLMGNNLRAITPASSSIVQG 261

Query: 1171 FNSLRLLNLEDNCLTDWNEIVKXXXXXXXXXXXLNKNNLNYIRYPDTDAIHKLLGGYESV 992
            F+ LRLLNLEDN + +W+EI+K           LNKN+L +I YPD+DAIH+LL G +S+
Sbjct: 262  FDYLRLLNLEDNHIAEWDEILKLSQLRSLEQLHLNKNHLKHIFYPDSDAIHQLLNGIDSL 321

Query: 991  EKSYVPFQNLRCLLLGGNNIGDLASIDSLNCFPRLVDIRISENPVTEPGKGGISRFILIA 812
            EK   PFQNL CLLLGGNNI DLAS+DSLN FP L DIR+SENPV +PG+GGI RF+LIA
Sbjct: 322  EKGCKPFQNLHCLLLGGNNIEDLASVDSLNSFPMLKDIRLSENPVADPGRGGIPRFVLIA 381

Query: 811  RLAKVQILNGSEVSPRERKDSEIRYVRLVMSKFHGNLEEIKQLHPRFSELKVFHGIEDER 632
            RL+KV+ILNGSEVS RERK+SEIRYVRLV+SK HGN EEI +LHPRF+ELK FHGIEDER
Sbjct: 382  RLSKVEILNGSEVSRRERKESEIRYVRLVISKMHGNPEEITRLHPRFAELKEFHGIEDER 441

Query: 631  PSNGAAGPQKMASGLICMYL 572
            P  GAAGPQKMASGL+ + L
Sbjct: 442  PLTGAAGPQKMASGLLSINL 461


>ref|XP_002525519.1| tubulin-specific chaperone E, putative [Ricinus communis]
            gi|223535198|gb|EEF36877.1| tubulin-specific chaperone E,
            putative [Ricinus communis]
          Length = 533

 Score =  418 bits (1075), Expect = e-114
 Identities = 217/320 (67%), Positives = 247/320 (77%)
 Frame = -1

Query: 1531 SLIKLGVSSSGPPSQISAAVPNLKELDLTGNLLSEWKDVGTICNELPALTALNLSYNIMS 1352
            SL  LG+SS G P+ I   VPNLKELDLTGNLLSEWKD+GTIC +LPAL ALNLS N+MS
Sbjct: 136  SLPFLGISSPGSPTDIRNLVPNLKELDLTGNLLSEWKDIGTICEQLPALAALNLSNNLMS 195

Query: 1351 HDLIGLPQLKNIHILVLNNTGLNWEHVEVLQESLPVIEELHLMGNRLREIKTTSSTTVQG 1172
              +  L QLKNIHILVLNNTG+NW  VEVL   LP IEELHLMGN +  I ++SS+ VQG
Sbjct: 196  RTIAELSQLKNIHILVLNNTGINWTQVEVLNHLLPAIEELHLMGNGIGTIMSSSSSIVQG 255

Query: 1171 FNSLRLLNLEDNCLTDWNEIVKXXXXXXXXXXXLNKNNLNYIRYPDTDAIHKLLGGYESV 992
            F+SLRLLNLEDN + +WNEI+K           LNKN L  I YPD D I KLL G ES 
Sbjct: 256  FDSLRLLNLEDNFIAEWNEILKLSSLRSLEQLYLNKNRLKRIFYPDADTIDKLLTGSES- 314

Query: 991  EKSYVPFQNLRCLLLGGNNIGDLASIDSLNCFPRLVDIRISENPVTEPGKGGISRFILIA 812
                +PFQNLRCLLLGGN I DLAS+DSLN FPRLVD+R+SENP+ + G+GGI RF+LIA
Sbjct: 315  -NVEIPFQNLRCLLLGGNRIEDLASVDSLNSFPRLVDVRLSENPIADTGRGGIPRFVLIA 373

Query: 811  RLAKVQILNGSEVSPRERKDSEIRYVRLVMSKFHGNLEEIKQLHPRFSELKVFHGIEDER 632
            RL+KV+ILNGSEV+PRERKDSEIRYVRLVMSK   N  EIK+LHPRF+ LK  HGIEDER
Sbjct: 374  RLSKVEILNGSEVTPRERKDSEIRYVRLVMSKLQDNTIEIKELHPRFAVLKALHGIEDER 433

Query: 631  PSNGAAGPQKMASGLICMYL 572
            PS G + PQKMASGLI + L
Sbjct: 434  PSIGTSSPQKMASGLISITL 453


>emb|CAN61855.1| hypothetical protein VITISV_016688 [Vitis vinifera]
          Length = 601

 Score =  388 bits (996), Expect = e-105
 Identities = 208/365 (56%), Positives = 251/365 (68%), Gaps = 45/365 (12%)
 Frame = -1

Query: 1531 SLIKLGVSSSGPPSQISAAVPNLKELDLTGNLLSEWKDVGTICNELPALTALNLSYNIMS 1352
            SL  LGVSS G P +I + VPNLKELDLTGNLLSEWKDVGTIC +LP L ALNLS N+M+
Sbjct: 157  SLSYLGVSSIGAPFEICSVVPNLKELDLTGNLLSEWKDVGTICVQLPGLAALNLSNNLMA 216

Query: 1351 HDLIGLPQLKNIHILVLNNTGLNWEHVEVLQESLPVIEELHLMGNRLREIKTTSSTTVQG 1172
            HD+ GLP L N+ +LVLNNTG+ W+ VE+++ SLP IEELHLMGN LR I   SS+ VQG
Sbjct: 217  HDITGLPLLMNLRVLVLNNTGIKWKEVEIIRHSLPAIEELHLMGNNLRAITPASSSIVQG 276

Query: 1171 FNSLRLLNLEDNCLTDWNEIVKXXXXXXXXXXXLNKNNLNYIRYPDTDAIHKLLGGYESV 992
            F+ LRLLNLEDN + +W+EI+K           LNKN+L +I YPD+DAIH+LL G +S+
Sbjct: 277  FDYLRLLNLEDNXIAEWDEILKLSQLRSLEQLHLNKNHLKHIFYPDSDAIHQLLNGIDSL 336

Query: 991  EKSYVPFQNLRCLLLGGNNIGDLASIDSLNCFPRLVDIRISENPVTEPGKGGISRFILIA 812
            EK   PFQNL CLLLGGNNI DLAS+DSLN FP L DIR+SENPV +PG+GGI RF+LIA
Sbjct: 337  EKGCKPFQNLHCLLLGGNNIEDLASVDSLNSFPMLKDIRLSENPVADPGRGGIPRFVLIA 396

Query: 811  RLAKVQILNGSEVSPRERKDSEIRYVRLV------------------------------- 725
            RL+KV+ILNGSEVS RERK+SEIR +++                                
Sbjct: 397  RLSKVEILNGSEVSRRERKESEIRILQVCSLSHIKDAWQPRRNHAASPQAKLGMPYPPMI 456

Query: 724  -----------MSKFHGNLEEI---KQLHPRFSELKVFHGIEDERPSNGAAGPQKMASGL 587
                        S ++ NL       +L+ RF+ELK FHGIEDERP  GAAGPQKMASGL
Sbjct: 457  KIFATVFXCVRFSNYYINLPASXSGPELNSRFAELKEFHGIEDERPLTGAAGPQKMASGL 516

Query: 586  ICMYL 572
            + + L
Sbjct: 517  LSINL 521


>ref|XP_004154663.1| PREDICTED: tubulin-specific chaperone E-like [Cucumis sativus]
          Length = 538

 Score =  381 bits (978), Expect = e-103
 Identities = 189/320 (59%), Positives = 242/320 (75%)
 Frame = -1

Query: 1531 SLIKLGVSSSGPPSQISAAVPNLKELDLTGNLLSEWKDVGTICNELPALTALNLSYNIMS 1352
            SL  +GVSS G P QI + +PNLK+LDLTGNLLS+WKD+  IC++L AL A+ LS N++S
Sbjct: 140  SLSYMGVSSLGNPGQIGSVLPNLKQLDLTGNLLSDWKDISIICDQLQALVAIILSNNLLS 199

Query: 1351 HDLIGLPQLKNIHILVLNNTGLNWEHVEVLQESLPVIEELHLMGNRLREIKTTSSTTVQG 1172
             ++ G  QLK+I ILVLNNTG+ W  VE+L+ SLP +EELHLMGN + E+K  SS+ V+G
Sbjct: 200  CEISGPLQLKHIRILVLNNTGITWMQVEILKHSLPAMEELHLMGNNISEVKPESSSMVEG 259

Query: 1171 FNSLRLLNLEDNCLTDWNEIVKXXXXXXXXXXXLNKNNLNYIRYPDTDAIHKLLGGYESV 992
            FN LRLLNLE+NC+ +WNEI+K           LN N L++I YP+ + +H+L G  ES 
Sbjct: 260  FNLLRLLNLENNCIAEWNEILKLGQLKSLEQIQLNNNKLSHIFYPNLNELHELFGDVES- 318

Query: 991  EKSYVPFQNLRCLLLGGNNIGDLASIDSLNCFPRLVDIRISENPVTEPGKGGISRFILIA 812
            +    PFQNLRCL LGGNNI  LASID LN FP L+DIR+SENP+ +P +GGI R++L+A
Sbjct: 319  QGDCFPFQNLRCLFLGGNNIDHLASIDVLNSFPNLIDIRLSENPIADPMRGGIPRYVLVA 378

Query: 811  RLAKVQILNGSEVSPRERKDSEIRYVRLVMSKFHGNLEEIKQLHPRFSELKVFHGIEDER 632
            RL+K+Q++NGSEV+PRER+DSEIRYVR+VMS   GN EE  +LHPRF ELK F+GIED  
Sbjct: 379  RLSKIQVINGSEVTPRERRDSEIRYVRMVMSNLDGNHEETLRLHPRFEELKSFYGIEDNS 438

Query: 631  PSNGAAGPQKMASGLICMYL 572
             S G AGPQK++SGLI + L
Sbjct: 439  ASVGPAGPQKLSSGLISITL 458


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