BLASTX nr result

ID: Panax21_contig00000857 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000857
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309943.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002512273.1| leucine-rich repeat-containing protein, puta...    65   8e-09
ref|XP_002517696.1| TMV resistance protein N, putative [Ricinus ...    59   3e-07

>ref|XP_002309943.1| predicted protein [Populus trichocarpa] gi|222852846|gb|EEE90393.1|
           predicted protein [Populus trichocarpa]
          Length = 451

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 54/147 (36%), Positives = 79/147 (53%), Gaps = 6/147 (4%)
 Frame = -1

Query: 425 KMKVRYEFGIFSTFIPGKELVESWFDYIDRSGSRSVCFIVPDNSSSKKRRIRGLNVCYAY 246
           ++++  E GIFS F+PG E V SW+ +  +  + SV F VP   S   R+IRGLN+C  Y
Sbjct: 273 RLQILQEQGIFSIFLPGSE-VPSWYSH--QKQNNSVSFAVPPLPS---RKIRGLNLCIVY 326

Query: 245 HLNDK----FTYWHDECKISNTTKDLRWFYTWSVSKSWSTQGEHGKYEDGIIMLSHWRLG 78
            L +      T +  + +ISN TK L+W Y   V       G     ED ++ LSHWR G
Sbjct: 327 GLRNTDKKCATLYPPDAEISNKTKVLKWSYNPIV------YGVPQIGED-MLWLSHWRFG 379

Query: 77  -NLLEVGDHLTIELP-TANSVIKEIGL 3
            + LEVGD + +    T +  +K+ G+
Sbjct: 380 TDQLEVGDQVNVSASVTPDFQVKKCGV 406


>ref|XP_002512273.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
            gi|223548234|gb|EEF49725.1| leucine-rich
            repeat-containing protein, putative [Ricinus communis]
          Length = 1166

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 46/130 (35%), Positives = 65/130 (50%), Gaps = 5/130 (3%)
 Frame = -1

Query: 419  KVRYEFGIFSTFIPGKELVESWFDYIDRSGSRSVCFIVPDNSSSKKRRIRGLNVCYAYHL 240
            KV +E GI S F+PG E V  W  Y  ++    + F +P    S  R++ GLN+C  Y  
Sbjct: 964  KVLHECGICSIFLPGSE-VPGW--YSPQNEGPLISFTMPP---SHVRKVCGLNICIVYTC 1017

Query: 239  NDKFTYW--HDECKISNTTKDLRWFYT---WSVSKSWSTQGEHGKYEDGIIMLSHWRLGN 75
            ND       H   KI N TKDL+W Y+   + + +           E  ++ LSHW+L +
Sbjct: 1018 NDVRNGLTDHHYIKIWNKTKDLKWTYSPIFYGIPEP----------EKSMLWLSHWKLED 1067

Query: 74   LLEVGDHLTI 45
            LLE GD L +
Sbjct: 1068 LLEGGDQLNV 1077


>ref|XP_002517696.1| TMV resistance protein N, putative [Ricinus communis]
            gi|223543328|gb|EEF44860.1| TMV resistance protein N,
            putative [Ricinus communis]
          Length = 1186

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 49/141 (34%), Positives = 72/141 (51%), Gaps = 5/141 (3%)
 Frame = -1

Query: 422  MKVRYEFGIFSTFIPGKELVESWFDYIDRSGSRSVCFIVPDNSSSKKRRIRGLNVC--YA 249
            ++V  E GIFS F+PG  + E WF+   RS S S+ F V      K   I+GL++C  Y 
Sbjct: 974  IQVLQECGIFSIFLPGNTIPE-WFN--QRSESSSISFEVEAKPGHK---IKGLSLCTLYT 1027

Query: 248  YHLNDKFTYWHDEC-KISNTTKDLRWFYTWSVSKSWSTQGEHGKYEDGIIMLSHWRLGNL 72
            Y   +   Y  + C KI+N T   +W Y+        T     K  + ++ LSHW  G+ 
Sbjct: 1028 YDKLEGGGYIDENCAKINNKTICEKWTYS-------PTFYGMPKPLEEMLWLSHWTFGDQ 1080

Query: 71   LEVGD--HLTIELPTANSVIK 15
            LEVGD  H+ +E+ +  +V K
Sbjct: 1081 LEVGDEVHILVEMASGLTVKK 1101


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