BLASTX nr result

ID: Panax21_contig00000856 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000856
         (1510 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281161.1| PREDICTED: WUSCHEL-related homeobox 2 [Vitis...    98   5e-18
ref|XP_004150189.1| PREDICTED: WUSCHEL-related homeobox 2-like [...    96   2e-17
ref|XP_003540730.1| PREDICTED: WUSCHEL-related homeobox 2-like [...    93   2e-16
ref|XP_003539089.1| PREDICTED: WUSCHEL-related homeobox 2-like [...    92   3e-16
ref|XP_002531361.1| transcription factor, putative [Ricinus comm...    92   4e-16

>ref|XP_002281161.1| PREDICTED: WUSCHEL-related homeobox 2 [Vitis vinifera]
          Length = 236

 Score = 98.2 bits (243), Expect = 5e-18
 Identities = 48/72 (66%), Positives = 54/72 (75%)
 Frame = -2

Query: 1425 GDHVDISFTGGGTPATHRWNPTKEQRSMLVNMCKQGITTPSAEQIKHITSELKEYGDIEG 1246
            GD+V     GGG PA+ RWNPTKEQ SML ++  QGI TPSAEQI+ IT  LK YG IEG
Sbjct: 3    GDNV-----GGGAPASSRWNPTKEQISMLESLYMQGIRTPSAEQIQQITGRLKAYGHIEG 57

Query: 1245 RNVFYWFLNHKA 1210
            +NVFYWF NHKA
Sbjct: 58   KNVFYWFQNHKA 69


>ref|XP_004150189.1| PREDICTED: WUSCHEL-related homeobox 2-like [Cucumis sativus]
          Length = 238

 Score = 96.3 bits (238), Expect = 2e-17
 Identities = 42/63 (66%), Positives = 51/63 (80%)
 Frame = -2

Query: 1398 GGGTPATHRWNPTKEQRSMLVNMCKQGITTPSAEQIKHITSELKEYGDIEGRNVFYWFLN 1219
            GGG P + RWNPTKEQ S+L N+ +QG+ TPSA+QI+ IT  LK+YG IEG+NVFYWF N
Sbjct: 16   GGGPPVSSRWNPTKEQISILENLYRQGVRTPSADQIQQITVRLKDYGHIEGKNVFYWFQN 75

Query: 1218 HKA 1210
            HKA
Sbjct: 76   HKA 78


>ref|XP_003540730.1| PREDICTED: WUSCHEL-related homeobox 2-like [Glycine max]
          Length = 256

 Score = 92.8 bits (229), Expect = 2e-16
 Identities = 42/68 (61%), Positives = 53/68 (77%)
 Frame = -2

Query: 1413 DISFTGGGTPATHRWNPTKEQRSMLVNMCKQGITTPSAEQIKHITSELKEYGDIEGRNVF 1234
            +++  GG   ++ RWNPTKEQ SML N+ KQGI TPSAE+I+ IT+ L+ YG IEG+NVF
Sbjct: 21   NVNGNGGVAGSSSRWNPTKEQISMLENLYKQGIKTPSAEEIQQITARLRAYGHIEGKNVF 80

Query: 1233 YWFLNHKA 1210
            YWF NHKA
Sbjct: 81   YWFQNHKA 88


>ref|XP_003539089.1| PREDICTED: WUSCHEL-related homeobox 2-like [Glycine max]
          Length = 261

 Score = 92.4 bits (228), Expect = 3e-16
 Identities = 42/61 (68%), Positives = 49/61 (80%)
 Frame = -2

Query: 1392 GTPATHRWNPTKEQRSMLVNMCKQGITTPSAEQIKHITSELKEYGDIEGRNVFYWFLNHK 1213
            G  A+ RWNPTKEQ SML N+ KQGI TPSAE+I+ IT+ L+ YG IEG+NVFYWF NHK
Sbjct: 25   GVAASSRWNPTKEQISMLENLYKQGIKTPSAEEIQQITARLRAYGHIEGKNVFYWFQNHK 84

Query: 1212 A 1210
            A
Sbjct: 85   A 85


>ref|XP_002531361.1| transcription factor, putative [Ricinus communis]
            gi|223529021|gb|EEF31009.1| transcription factor,
            putative [Ricinus communis]
          Length = 268

 Score = 92.0 bits (227), Expect = 4e-16
 Identities = 43/74 (58%), Positives = 55/74 (74%), Gaps = 3/74 (4%)
 Frame = -2

Query: 1422 DHVDISFTGGGTPA---THRWNPTKEQRSMLVNMCKQGITTPSAEQIKHITSELKEYGDI 1252
            +++D   +G GT A     RWNPTKEQ  +L NM +QGI TP+AEQI+ IT+ L++YG I
Sbjct: 4    ENIDTGNSGDGTGAHQVNSRWNPTKEQIGLLENMYRQGIRTPTAEQIQQITTRLRDYGHI 63

Query: 1251 EGRNVFYWFLNHKA 1210
            EG+NVFYWF NHKA
Sbjct: 64   EGKNVFYWFQNHKA 77


Top