BLASTX nr result
ID: Panax21_contig00000842
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00000842 (442 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002279095.1| PREDICTED: cleavage and polyadenylation spec... 79 5e-13 emb|CBI27869.3| unnamed protein product [Vitis vinifera] 79 5e-13 ref|NP_001242595.1| uncharacterized protein LOC100791216 [Glycin... 75 6e-12 ref|XP_002514092.1| pre-mRNA cleavage factor im, 25kD subunit, p... 71 1e-10 ref|XP_003547488.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and... 70 2e-10 >ref|XP_002279095.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 5-like [Vitis vinifera] Length = 284 Score = 78.6 bits (192), Expect = 5e-13 Identities = 34/46 (73%), Positives = 38/46 (82%) Frame = +1 Query: 304 DIDGLRRKLSNKLSEHCDGTGSDWEVGECLSKWWRSDFETLFYPYL 441 +I+GL+RKLS KLS + DG GSDWEVGECL WWR DFETL YPYL Sbjct: 171 EINGLKRKLSRKLSVNEDGDGSDWEVGECLGMWWRPDFETLLYPYL 216 >emb|CBI27869.3| unnamed protein product [Vitis vinifera] Length = 291 Score = 78.6 bits (192), Expect = 5e-13 Identities = 34/46 (73%), Positives = 38/46 (82%) Frame = +1 Query: 304 DIDGLRRKLSNKLSEHCDGTGSDWEVGECLSKWWRSDFETLFYPYL 441 +I+GL+RKLS KLS + DG GSDWEVGECL WWR DFETL YPYL Sbjct: 178 EINGLKRKLSRKLSVNEDGDGSDWEVGECLGMWWRPDFETLLYPYL 223 >ref|NP_001242595.1| uncharacterized protein LOC100791216 [Glycine max] gi|255640824|gb|ACU20695.1| unknown [Glycine max] Length = 216 Score = 75.1 bits (183), Expect = 6e-12 Identities = 31/46 (67%), Positives = 37/46 (80%) Frame = +1 Query: 304 DIDGLRRKLSNKLSEHCDGTGSDWEVGECLSKWWRSDFETLFYPYL 441 D DGL+RKL+ KLS + DG GS+WEVGECL WWR DFETL YP++ Sbjct: 108 DTDGLKRKLARKLSVNEDGDGSEWEVGECLGMWWRPDFETLMYPFI 153 >ref|XP_002514092.1| pre-mRNA cleavage factor im, 25kD subunit, putative [Ricinus communis] gi|223546548|gb|EEF48046.1| pre-mRNA cleavage factor im, 25kD subunit, putative [Ricinus communis] Length = 214 Score = 70.9 bits (172), Expect = 1e-10 Identities = 33/46 (71%), Positives = 35/46 (76%) Frame = +1 Query: 304 DIDGLRRKLSNKLSEHCDGTGSDWEVGECLSKWWRSDFETLFYPYL 441 DI GL+RKLS KLS + D T DWEVGECL WWR DFETL YPYL Sbjct: 103 DIGGLKRKLSRKLSNNQDQT--DWEVGECLGMWWRPDFETLLYPYL 146 >ref|XP_003547488.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation specificity factor subunit 5-like [Glycine max] Length = 233 Score = 70.1 bits (170), Expect = 2e-10 Identities = 31/46 (67%), Positives = 35/46 (76%) Frame = +1 Query: 304 DIDGLRRKLSNKLSEHCDGTGSDWEVGECLSKWWRSDFETLFYPYL 441 D DGL+RKL+ KLS DG GS+WEVGECL WWR DFETL +P L Sbjct: 124 DTDGLKRKLARKLSIIEDGDGSEWEVGECLEMWWRPDFETLVFPCL 169