BLASTX nr result

ID: Panax21_contig00000840 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000840
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514291.1| signal peptidase I, putative [Ricinus commun...    75   6e-12
ref|XP_002324423.1| predicted protein [Populus trichocarpa] gi|2...    75   6e-12
ref|XP_002883537.1| signal peptidase I family protein [Arabidops...    74   1e-11
gb|AAN72018.1| chloroplast thylakoidal processing peptidase, put...    74   2e-11
dbj|BAB02011.1| unnamed protein product [Arabidopsis thaliana]         74   2e-11

>ref|XP_002514291.1| signal peptidase I, putative [Ricinus communis]
           gi|223546747|gb|EEF48245.1| signal peptidase I, putative
           [Ricinus communis]
          Length = 313

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 35/58 (60%), Positives = 41/58 (70%)
 Frame = +1

Query: 277 KEEDFILGAPKYEMTPVRVPENSVFVMGDNRNNGYDSHVWKTASTTCLTILGIKFLCY 450
           + E+FIL +P Y+MTP+RVPENSVFVMGDNRNN YDSHVW         I+G  F  Y
Sbjct: 228 RNENFILESPSYDMTPIRVPENSVFVMGDNRNNSYDSHVW--GPLPAKNIIGRSFFRY 283


>ref|XP_002324423.1| predicted protein [Populus trichocarpa] gi|222865857|gb|EEF02988.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 33/41 (80%), Positives = 36/41 (87%)
 Frame = +1

Query: 274 MKEEDFILGAPKYEMTPVRVPENSVFVMGDNRNNGYDSHVW 396
           ++ E FIL +P YEMTPVRVPENSVFVMGDNRNN YDSHVW
Sbjct: 119 VRSEKFILESPLYEMTPVRVPENSVFVMGDNRNNSYDSHVW 159


>ref|XP_002883537.1| signal peptidase I family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297329377|gb|EFH59796.1| signal peptidase I
           family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 290

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 33/40 (82%), Positives = 34/40 (85%)
 Frame = +1

Query: 277 KEEDFILGAPKYEMTPVRVPENSVFVMGDNRNNGYDSHVW 396
           + E FIL  P YEMTPVRVPENSVFVMGDNRNN YDSHVW
Sbjct: 217 RNEKFILEPPGYEMTPVRVPENSVFVMGDNRNNSYDSHVW 256


>gb|AAN72018.1| chloroplast thylakoidal processing peptidase, putative [Arabidopsis
           thaliana]
          Length = 291

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 32/40 (80%), Positives = 34/40 (85%)
 Frame = +1

Query: 277 KEEDFILGAPKYEMTPVRVPENSVFVMGDNRNNGYDSHVW 396
           + E FIL  P YEMTP+RVPENSVFVMGDNRNN YDSHVW
Sbjct: 216 RNEKFILEPPGYEMTPIRVPENSVFVMGDNRNNSYDSHVW 255


>dbj|BAB02011.1| unnamed protein product [Arabidopsis thaliana]
          Length = 310

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 32/40 (80%), Positives = 34/40 (85%)
 Frame = +1

Query: 277 KEEDFILGAPKYEMTPVRVPENSVFVMGDNRNNGYDSHVW 396
           + E FIL  P YEMTP+RVPENSVFVMGDNRNN YDSHVW
Sbjct: 235 RNEKFILEPPGYEMTPIRVPENSVFVMGDNRNNSYDSHVW 274


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