BLASTX nr result
ID: Panax21_contig00000812
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00000812 (408 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI20399.3| unnamed protein product [Vitis vinifera] 110 3e-43 ref|XP_002284309.2| PREDICTED: ubiquitin carboxyl-terminal hydro... 110 3e-43 gb|AFK40689.1| unknown [Lotus japonicus] 101 2e-40 gb|AEL99146.1| ubiquitin carboxyl-terminal hydrolase, partial [S... 104 1e-39 ref|XP_002317532.1| predicted protein [Populus trichocarpa] gi|2... 100 2e-39 >emb|CBI20399.3| unnamed protein product [Vitis vinifera] Length = 808 Score = 110 bits (275), Expect(2) = 3e-43 Identities = 49/54 (90%), Positives = 51/54 (94%) Frame = +2 Query: 245 LPDGGGRYRLIGLVSHIGTSTHCGHYVAHIYKDGRWAIFNDEKVGASKDPPKDM 406 LPDGGGRYRLIGLVSHIGTST CGHYVAHIYKDGRW IFND+KVGAS +PPKDM Sbjct: 744 LPDGGGRYRLIGLVSHIGTSTQCGHYVAHIYKDGRWVIFNDDKVGASINPPKDM 797 Score = 90.1 bits (222), Expect(2) = 3e-43 Identities = 44/53 (83%), Positives = 51/53 (96%), Gaps = 1/53 (1%) Frame = +3 Query: 3 DQSKVDTLVSFGFQEEIARKALKASGGDIEKATDWIFSN-DSAGSSDMDATSS 158 DQSKVDTL+SFGFQE+I+R+AL+ASGGDIEKATDWIFSN D+A SSDMDAT+S Sbjct: 683 DQSKVDTLISFGFQEDISRRALRASGGDIEKATDWIFSNPDAASSSDMDATTS 735 >ref|XP_002284309.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 14-like [Vitis vinifera] Length = 794 Score = 110 bits (275), Expect(2) = 3e-43 Identities = 49/54 (90%), Positives = 51/54 (94%) Frame = +2 Query: 245 LPDGGGRYRLIGLVSHIGTSTHCGHYVAHIYKDGRWAIFNDEKVGASKDPPKDM 406 LPDGGGRYRLIGLVSHIGTST CGHYVAHIYKDGRW IFND+KVGAS +PPKDM Sbjct: 730 LPDGGGRYRLIGLVSHIGTSTQCGHYVAHIYKDGRWVIFNDDKVGASINPPKDM 783 Score = 90.1 bits (222), Expect(2) = 3e-43 Identities = 44/53 (83%), Positives = 51/53 (96%), Gaps = 1/53 (1%) Frame = +3 Query: 3 DQSKVDTLVSFGFQEEIARKALKASGGDIEKATDWIFSN-DSAGSSDMDATSS 158 DQSKVDTL+SFGFQE+I+R+AL+ASGGDIEKATDWIFSN D+A SSDMDAT+S Sbjct: 669 DQSKVDTLISFGFQEDISRRALRASGGDIEKATDWIFSNPDAASSSDMDATTS 721 >gb|AFK40689.1| unknown [Lotus japonicus] Length = 244 Score = 101 bits (251), Expect(2) = 2e-40 Identities = 43/55 (78%), Positives = 49/55 (89%) Frame = +2 Query: 242 ALPDGGGRYRLIGLVSHIGTSTHCGHYVAHIYKDGRWAIFNDEKVGASKDPPKDM 406 +LPDGGG+YRL+G+VSH GTS HCGHYVAHI KDGRW IFND+KVGAS PPK+M Sbjct: 179 SLPDGGGKYRLMGVVSHSGTSVHCGHYVAHILKDGRWVIFNDDKVGASISPPKEM 233 Score = 89.7 bits (221), Expect(2) = 2e-40 Identities = 44/52 (84%), Positives = 47/52 (90%) Frame = +3 Query: 3 DQSKVDTLVSFGFQEEIARKALKASGGDIEKATDWIFSNDSAGSSDMDATSS 158 DQSKVDTL+SFGFQEEIARKALKASGGDIEKATDWIF++ A S MDATSS Sbjct: 118 DQSKVDTLISFGFQEEIARKALKASGGDIEKATDWIFTSPDASVSSMDATSS 169 >gb|AEL99146.1| ubiquitin carboxyl-terminal hydrolase, partial [Silene latifolia] Length = 442 Score = 104 bits (259), Expect(2) = 1e-39 Identities = 43/54 (79%), Positives = 50/54 (92%) Frame = +2 Query: 245 LPDGGGRYRLIGLVSHIGTSTHCGHYVAHIYKDGRWAIFNDEKVGASKDPPKDM 406 LPDG GRY+L+G VSH+GTSTHCGHYVAHIYKDG+W ++NDEKVGAS +PPKDM Sbjct: 380 LPDGTGRYKLLGFVSHMGTSTHCGHYVAHIYKDGKWVLYNDEKVGASLNPPKDM 433 Score = 84.0 bits (206), Expect(2) = 1e-39 Identities = 42/53 (79%), Positives = 48/53 (90%), Gaps = 1/53 (1%) Frame = +3 Query: 3 DQSKVDTLVSFGFQEEIARKALKASGGDIEKATDWIFSNDSA-GSSDMDATSS 158 DQSKVDTLV+FGFQEE+ARKAL A+GGDIEKATDWIFSN +A +SDMD +SS Sbjct: 317 DQSKVDTLVTFGFQEELARKALMATGGDIEKATDWIFSNPNASATSDMDTSSS 369 >ref|XP_002317532.1| predicted protein [Populus trichocarpa] gi|222860597|gb|EEE98144.1| predicted protein [Populus trichocarpa] Length = 809 Score = 100 bits (249), Expect(2) = 2e-39 Identities = 43/54 (79%), Positives = 47/54 (87%) Frame = +2 Query: 245 LPDGGGRYRLIGLVSHIGTSTHCGHYVAHIYKDGRWAIFNDEKVGASKDPPKDM 406 LPDG GRYRL G+VSH+GTSTHCGHYVAH+ KDGRW IFND KV AS +PPKDM Sbjct: 745 LPDGRGRYRLFGIVSHMGTSTHCGHYVAHVLKDGRWVIFNDNKVAASINPPKDM 798 Score = 87.4 bits (215), Expect(2) = 2e-39 Identities = 44/53 (83%), Positives = 50/53 (94%), Gaps = 1/53 (1%) Frame = +3 Query: 3 DQSKVDTLVSFGFQEEIARKALKASGGDIEKATDWIFSN-DSAGSSDMDATSS 158 DQSKVDTL+SFGFQEEIARKALKASGGDIEKATDWIF+N D++ SSDMD ++S Sbjct: 682 DQSKVDTLLSFGFQEEIARKALKASGGDIEKATDWIFNNPDASVSSDMDTSTS 734