BLASTX nr result

ID: Panax21_contig00000799 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000799
         (1439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282447.2| PREDICTED: E3 ubiquitin-protein ligase MARCH...   540   e-151
emb|CBI32382.3| unnamed protein product [Vitis vinifera]              540   e-151
ref|XP_002313128.1| predicted protein [Populus trichocarpa] gi|2...   517   e-144
ref|XP_002298731.1| predicted protein [Populus trichocarpa] gi|2...   510   e-142
ref|XP_003528520.1| PREDICTED: E3 ubiquitin-protein ligase MARCH...   508   e-141

>ref|XP_002282447.2| PREDICTED: E3 ubiquitin-protein ligase MARCH6 [Vitis vinifera]
          Length = 1195

 Score =  540 bits (1391), Expect = e-151
 Identities = 265/314 (84%), Positives = 285/314 (90%), Gaps = 1/314 (0%)
 Frame = +3

Query: 3    VVAWMTLLVFNSALVVTPISLGRALFNAVPLLPITHGIKCNDLYTFVIGSYVIWTAVAGA 182
            VVAWMTLL+FNSAL+V PISLGRALFN +PLLPITHGIKCNDLY+F+IGSYVIWTA+AG 
Sbjct: 882  VVAWMTLLIFNSALIVVPISLGRALFNGIPLLPITHGIKCNDLYSFIIGSYVIWTALAGV 941

Query: 183  RYSIEYMKTRRAVVLLNHLWKWFGIVLKSSVLLSIWIFVIPVLIGLLFELLVIVPMRVPV 362
            RYSIE++KTRRAVVLL+ +WKW  IV+KSSVLLSIWIFVIPVLIGLLFELLVIVPMRVPV
Sbjct: 942  RYSIEHIKTRRAVVLLSQMWKWCVIVIKSSVLLSIWIFVIPVLIGLLFELLVIVPMRVPV 1001

Query: 363  DESPVFLLYQDWALGLIFLKIWTRLVMLDHMMPLVDESWRIKFERVREDGFSRLQGFWVL 542
            DESPVFLLYQDWALGLIFLKIWTRLVMLDHMMPLVDESWRIKFERVREDGFSRLQG WVL
Sbjct: 1002 DESPVFLLYQDWALGLIFLKIWTRLVMLDHMMPLVDESWRIKFERVREDGFSRLQGLWVL 1061

Query: 543  REIVFPIIMKLLTALCVPYVLARGVFPVFGYPLVVNSAIYRFAWLGCLSFSLVCFCVKRF 722
            REIVFPIIMKLLTALCVPYVLARGVFPV GYPLVVNSA+YRFAWLGCL FSL+CFC KRF
Sbjct: 1062 REIVFPIIMKLLTALCVPYVLARGVFPVLGYPLVVNSAVYRFAWLGCLCFSLLCFCAKRF 1121

Query: 723  HGWFSNLHNSIRDDRYLIGRRLHDFGEDKEIRQNKSE-IASDMQDANAQDNGLILHDGEE 899
            H WF+NLHNSIRDDRYLIGRRLH++GED E +QN+ E I S+ Q AN     LI HD  E
Sbjct: 1122 HVWFTNLHNSIRDDRYLIGRRLHNYGEDTEGKQNEVEDIPSETQSANLHGTALIRHD-RE 1180

Query: 900  ADVGMRHRRAIRQD 941
            AD+GMR RRA R D
Sbjct: 1181 ADIGMRLRRANRHD 1194


>emb|CBI32382.3| unnamed protein product [Vitis vinifera]
          Length = 1110

 Score =  540 bits (1391), Expect = e-151
 Identities = 265/314 (84%), Positives = 285/314 (90%), Gaps = 1/314 (0%)
 Frame = +3

Query: 3    VVAWMTLLVFNSALVVTPISLGRALFNAVPLLPITHGIKCNDLYTFVIGSYVIWTAVAGA 182
            VVAWMTLL+FNSAL+V PISLGRALFN +PLLPITHGIKCNDLY+F+IGSYVIWTA+AG 
Sbjct: 797  VVAWMTLLIFNSALIVVPISLGRALFNGIPLLPITHGIKCNDLYSFIIGSYVIWTALAGV 856

Query: 183  RYSIEYMKTRRAVVLLNHLWKWFGIVLKSSVLLSIWIFVIPVLIGLLFELLVIVPMRVPV 362
            RYSIE++KTRRAVVLL+ +WKW  IV+KSSVLLSIWIFVIPVLIGLLFELLVIVPMRVPV
Sbjct: 857  RYSIEHIKTRRAVVLLSQMWKWCVIVIKSSVLLSIWIFVIPVLIGLLFELLVIVPMRVPV 916

Query: 363  DESPVFLLYQDWALGLIFLKIWTRLVMLDHMMPLVDESWRIKFERVREDGFSRLQGFWVL 542
            DESPVFLLYQDWALGLIFLKIWTRLVMLDHMMPLVDESWRIKFERVREDGFSRLQG WVL
Sbjct: 917  DESPVFLLYQDWALGLIFLKIWTRLVMLDHMMPLVDESWRIKFERVREDGFSRLQGLWVL 976

Query: 543  REIVFPIIMKLLTALCVPYVLARGVFPVFGYPLVVNSAIYRFAWLGCLSFSLVCFCVKRF 722
            REIVFPIIMKLLTALCVPYVLARGVFPV GYPLVVNSA+YRFAWLGCL FSL+CFC KRF
Sbjct: 977  REIVFPIIMKLLTALCVPYVLARGVFPVLGYPLVVNSAVYRFAWLGCLCFSLLCFCAKRF 1036

Query: 723  HGWFSNLHNSIRDDRYLIGRRLHDFGEDKEIRQNKSE-IASDMQDANAQDNGLILHDGEE 899
            H WF+NLHNSIRDDRYLIGRRLH++GED E +QN+ E I S+ Q AN     LI HD  E
Sbjct: 1037 HVWFTNLHNSIRDDRYLIGRRLHNYGEDTEGKQNEVEDIPSETQSANLHGTALIRHD-RE 1095

Query: 900  ADVGMRHRRAIRQD 941
            AD+GMR RRA R D
Sbjct: 1096 ADIGMRLRRANRHD 1109


>ref|XP_002313128.1| predicted protein [Populus trichocarpa] gi|222849536|gb|EEE87083.1|
            predicted protein [Populus trichocarpa]
          Length = 1110

 Score =  517 bits (1331), Expect = e-144
 Identities = 254/313 (81%), Positives = 278/313 (88%)
 Frame = +3

Query: 3    VVAWMTLLVFNSALVVTPISLGRALFNAVPLLPITHGIKCNDLYTFVIGSYVIWTAVAGA 182
            VVAWMTLL+FNS L+V PISLGRALFNA+PLLPITHGIKCNDLY FVIGSYVIWTA+AGA
Sbjct: 800  VVAWMTLLMFNSTLIVVPISLGRALFNAIPLLPITHGIKCNDLYAFVIGSYVIWTALAGA 859

Query: 183  RYSIEYMKTRRAVVLLNHLWKWFGIVLKSSVLLSIWIFVIPVLIGLLFELLVIVPMRVPV 362
            RYSIE ++T+RA VL   +WKW  IVLKSS LLSIWIFVIPVLIGLLFELLVIVPMRVPV
Sbjct: 860  RYSIEQIRTKRATVLFRQIWKWCSIVLKSSALLSIWIFVIPVLIGLLFELLVIVPMRVPV 919

Query: 363  DESPVFLLYQDWALGLIFLKIWTRLVMLDHMMPLVDESWRIKFERVREDGFSRLQGFWVL 542
            DESPVFLLYQDWALGLIFLKIWTRLVMLD MMPLVDESWRIKFERVREDGFSRLQG WVL
Sbjct: 920  DESPVFLLYQDWALGLIFLKIWTRLVMLDQMMPLVDESWRIKFERVREDGFSRLQGLWVL 979

Query: 543  REIVFPIIMKLLTALCVPYVLARGVFPVFGYPLVVNSAIYRFAWLGCLSFSLVCFCVKRF 722
            +EIVFPIIMKLLTALCVPYVL+RGVFPV GYPL VNSA+YRFAWLGCL FSL+CFC KRF
Sbjct: 980  QEIVFPIIMKLLTALCVPYVLSRGVFPVLGYPLAVNSAVYRFAWLGCLCFSLLCFCGKRF 1039

Query: 723  HGWFSNLHNSIRDDRYLIGRRLHDFGEDKEIRQNKSEIASDMQDANAQDNGLILHDGEEA 902
            H WF+NLHNSIRDDRYLIGRRLH++GE KE +QN++  +S+ Q +N+Q  GLI   GE  
Sbjct: 1040 HVWFTNLHNSIRDDRYLIGRRLHNYGEYKEKQQNEAGTSSEAQISNSQGTGLI---GEVD 1096

Query: 903  DVGMRHRRAIRQD 941
              G+R RRAIR +
Sbjct: 1097 VGGIRLRRAIRDE 1109


>ref|XP_002298731.1| predicted protein [Populus trichocarpa] gi|222845989|gb|EEE83536.1|
            predicted protein [Populus trichocarpa]
          Length = 1054

 Score =  510 bits (1313), Expect = e-142
 Identities = 248/313 (79%), Positives = 277/313 (88%)
 Frame = +3

Query: 3    VVAWMTLLVFNSALVVTPISLGRALFNAVPLLPITHGIKCNDLYTFVIGSYVIWTAVAGA 182
            VVAWM+LL+FNS L+V PISLGRALFNA+PLLPITHGIKCNDLY FVIGSYVIWTA+AGA
Sbjct: 745  VVAWMSLLIFNSVLIVVPISLGRALFNAIPLLPITHGIKCNDLYAFVIGSYVIWTALAGA 804

Query: 183  RYSIEYMKTRRAVVLLNHLWKWFGIVLKSSVLLSIWIFVIPVLIGLLFELLVIVPMRVPV 362
            RYSIE ++T+RA VL + +WKW  IVLKS  LLSIWIFVIPVLIGLLFELLVIVP+RVPV
Sbjct: 805  RYSIEQIRTKRATVLFSQVWKWCSIVLKSLALLSIWIFVIPVLIGLLFELLVIVPLRVPV 864

Query: 363  DESPVFLLYQDWALGLIFLKIWTRLVMLDHMMPLVDESWRIKFERVREDGFSRLQGFWVL 542
            DESPVFLLYQDWALGLIFLKI TRLVMLD +MPLVDESWR KFERVREDGFSRLQ  WVL
Sbjct: 865  DESPVFLLYQDWALGLIFLKICTRLVMLDQVMPLVDESWRTKFERVREDGFSRLQCLWVL 924

Query: 543  REIVFPIIMKLLTALCVPYVLARGVFPVFGYPLVVNSAIYRFAWLGCLSFSLVCFCVKRF 722
            +EIVFPIIMKLLTALCVPYVLARGVFPV GYP+ VNSA+YRFAWLGCL FSL+CFC KRF
Sbjct: 925  QEIVFPIIMKLLTALCVPYVLARGVFPVLGYPMAVNSAVYRFAWLGCLCFSLLCFCAKRF 984

Query: 723  HGWFSNLHNSIRDDRYLIGRRLHDFGEDKEIRQNKSEIASDMQDANAQDNGLILHDGEEA 902
            H WF+NLHNSIRDDRYLIGR+LH++GED    QN++  +S+ Q++N+QD GLI     EA
Sbjct: 985  HVWFTNLHNSIRDDRYLIGRKLHNYGEDLGEEQNEAGTSSEAQNSNSQDTGLI----REA 1040

Query: 903  DVGMRHRRAIRQD 941
            DVG+R RRA RQ+
Sbjct: 1041 DVGIRQRRANRQE 1053


>ref|XP_003528520.1| PREDICTED: E3 ubiquitin-protein ligase MARCH6-like [Glycine max]
          Length = 1124

 Score =  508 bits (1308), Expect = e-141
 Identities = 249/312 (79%), Positives = 272/312 (87%)
 Frame = +3

Query: 3    VVAWMTLLVFNSALVVTPISLGRALFNAVPLLPITHGIKCNDLYTFVIGSYVIWTAVAGA 182
            V+AWMTLLVFNSAL+V PISLGRALFN++P LPITHGIKCNDLY F+IGSYVIWTAVAG 
Sbjct: 813  VIAWMTLLVFNSALIVVPISLGRALFNSIPRLPITHGIKCNDLYAFIIGSYVIWTAVAGV 872

Query: 183  RYSIEYMKTRRAVVLLNHLWKWFGIVLKSSVLLSIWIFVIPVLIGLLFELLVIVPMRVPV 362
            RYSIE ++ RR+ VL   LWKW GI++KSS LLSIWIFVIPVLIGLLFELLVIVPMRVPV
Sbjct: 873  RYSIEQIRKRRSSVLFGQLWKWCGILVKSSALLSIWIFVIPVLIGLLFELLVIVPMRVPV 932

Query: 363  DESPVFLLYQDWALGLIFLKIWTRLVMLDHMMPLVDESWRIKFERVREDGFSRLQGFWVL 542
            DESPVFLLYQDWALGLIFLKIWTRLVMLDHMMPLVDESWR+KFERVREDGFSRLQG WVL
Sbjct: 933  DESPVFLLYQDWALGLIFLKIWTRLVMLDHMMPLVDESWRVKFERVREDGFSRLQGLWVL 992

Query: 543  REIVFPIIMKLLTALCVPYVLARGVFPVFGYPLVVNSAIYRFAWLGCLSFSLVCFCVKRF 722
            REIV PIIMKLLTALCVPYVLA+GVFPV GYPLV+NSA+YRFAWLGCLSFS VCFC KRF
Sbjct: 993  REIVLPIIMKLLTALCVPYVLAKGVFPVLGYPLVINSAVYRFAWLGCLSFSFVCFCAKRF 1052

Query: 723  HGWFSNLHNSIRDDRYLIGRRLHDFGEDKEIRQNKSEIASDMQDANAQDNGLILHDGEEA 902
            H WF+NLHNSIRDDRYLIGRRLH+FGE  E + N +E ++  Q+A     GL   D  EA
Sbjct: 1053 HVWFTNLHNSIRDDRYLIGRRLHNFGEHAE-KANVAETSTGEQEAILLGTGLNQQD-HEA 1110

Query: 903  DVGMRHRRAIRQ 938
            DVG+R R   +Q
Sbjct: 1111 DVGLRLRHVNQQ 1122


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