BLASTX nr result

ID: Panax21_contig00000796 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000796
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA96068.1| 60S ribosomal protein L27a [Panax ginseng]            252   2e-65
ref|XP_002281019.1| PREDICTED: 60S ribosomal protein L27a-3 isof...   226   2e-57
ref|XP_002274098.1| PREDICTED: 60S ribosomal protein L27a-3 [Vit...   226   2e-57
gb|ADR71245.1| 60S ribosomal protein L27B [Hevea brasiliensis]        224   4e-57
ref|XP_002272813.1| PREDICTED: 60S ribosomal protein L27a-3 [Vit...   224   4e-57

>dbj|BAA96068.1| 60S ribosomal protein L27a [Panax ginseng]
          Length = 146

 Score =  252 bits (644), Expect = 2e-65
 Identities = 118/118 (100%), Positives = 118/118 (100%)
 Frame = -3

Query: 354 GRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHRLRNKFYCPVVNIDKLW 175
           GRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHRLRNKFYCPVVNIDKLW
Sbjct: 20  GRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHRLRNKFYCPVVNIDKLW 79

Query: 174 SLLPQEAKEKADAQNAPVIDVTQHGYFKVLGKGFLPSSHPIVVKAKLVSKTAEKKIKE 1
           SLLPQEAKEKADAQNAPVIDVTQHGYFKVLGKGFLPSSHPIVVKAKLVSKTAEKKIKE
Sbjct: 80  SLLPQEAKEKADAQNAPVIDVTQHGYFKVLGKGFLPSSHPIVVKAKLVSKTAEKKIKE 137


>ref|XP_002281019.1| PREDICTED: 60S ribosomal protein L27a-3 isoform 1 [Vitis vinifera]
           gi|359491222|ref|XP_003634245.1| PREDICTED: 60S
           ribosomal protein L27a-3 isoform 2 [Vitis vinifera]
           gi|147859771|emb|CAN78902.1| hypothetical protein
           VITISV_026450 [Vitis vinifera]
          Length = 146

 Score =  226 bits (575), Expect = 2e-57
 Identities = 103/118 (87%), Positives = 110/118 (93%)
 Frame = -3

Query: 354 GRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHRLRNKFYCPVVNIDKLW 175
           GRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFH+LRNKFYCP+VNIDKLW
Sbjct: 20  GRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNKFYCPIVNIDKLW 79

Query: 174 SLLPQEAKEKADAQNAPVIDVTQHGYFKVLGKGFLPSSHPIVVKAKLVSKTAEKKIKE 1
           SL+PQ+ K+KA  +NAP+IDVTQ GYFKVLGKG LP S PIVVKAKLVSK AEKKIKE
Sbjct: 80  SLIPQDVKDKASPENAPLIDVTQFGYFKVLGKGALPESKPIVVKAKLVSKIAEKKIKE 137


>ref|XP_002274098.1| PREDICTED: 60S ribosomal protein L27a-3 [Vitis vinifera]
           gi|147783378|emb|CAN59887.1| hypothetical protein
           VITISV_026169 [Vitis vinifera]
          Length = 146

 Score =  226 bits (575), Expect = 2e-57
 Identities = 103/118 (87%), Positives = 110/118 (93%)
 Frame = -3

Query: 354 GRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHRLRNKFYCPVVNIDKLW 175
           GRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFH+LRNKFYCP+VNIDKLW
Sbjct: 20  GRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNKFYCPIVNIDKLW 79

Query: 174 SLLPQEAKEKADAQNAPVIDVTQHGYFKVLGKGFLPSSHPIVVKAKLVSKTAEKKIKE 1
           S++PQ+ K+KA   NAP+IDVTQ GYFKVLGKG LPSS PIVVKAKLVSK AEKKIKE
Sbjct: 80  SMVPQDVKDKASPDNAPLIDVTQFGYFKVLGKGALPSSQPIVVKAKLVSKIAEKKIKE 137


>gb|ADR71245.1| 60S ribosomal protein L27B [Hevea brasiliensis]
          Length = 146

 Score =  224 bits (572), Expect = 4e-57
 Identities = 102/118 (86%), Positives = 109/118 (92%)
 Frame = -3

Query: 354 GRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHRLRNKFYCPVVNIDKLW 175
           GRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFH+LRNKFYCP+VNIDKLW
Sbjct: 20  GRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNKFYCPIVNIDKLW 79

Query: 174 SLLPQEAKEKADAQNAPVIDVTQHGYFKVLGKGFLPSSHPIVVKAKLVSKTAEKKIKE 1
           SL+PQE K+KA   N P+IDVTQ+GYFKVLGKG LP + PIVVKAKLVSK AEKKIKE
Sbjct: 80  SLIPQEVKDKASKDNVPMIDVTQYGYFKVLGKGALPENKPIVVKAKLVSKIAEKKIKE 137


>ref|XP_002272813.1| PREDICTED: 60S ribosomal protein L27a-3 [Vitis vinifera]
           gi|147792161|emb|CAN68574.1| hypothetical protein
           VITISV_033684 [Vitis vinifera]
           gi|147799274|emb|CAN61498.1| hypothetical protein
           VITISV_034088 [Vitis vinifera]
          Length = 146

 Score =  224 bits (572), Expect = 4e-57
 Identities = 101/118 (85%), Positives = 109/118 (92%)
 Frame = -3

Query: 354 GRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHRLRNKFYCPVVNIDKLW 175
           GRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFH+LRNKF+CP+VN+DKLW
Sbjct: 20  GRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNKFFCPIVNVDKLW 79

Query: 174 SLLPQEAKEKADAQNAPVIDVTQHGYFKVLGKGFLPSSHPIVVKAKLVSKTAEKKIKE 1
           SL+PQE K KA  +NAP+IDVTQ GY KVLGKGFLP S PIVVKAKL+SK AEKKIKE
Sbjct: 80  SLIPQEVKAKASPENAPMIDVTQFGYVKVLGKGFLPESQPIVVKAKLISKVAEKKIKE 137


Top