BLASTX nr result

ID: Panax21_contig00000792 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000792
         (496 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307161.1| predicted protein [Populus trichocarpa] gi|2...   118   4e-25
ref|XP_002306344.1| predicted protein [Populus trichocarpa] gi|2...   117   7e-25
ref|XP_003636724.1| Lysine-specific demethylase 3B [Medicago tru...   114   8e-24
ref|XP_003592698.1| Lysine-specific demethylase 3A [Medicago tru...   114   8e-24
ref|XP_003576388.1| PREDICTED: uncharacterized protein LOC100822...   112   3e-23

>ref|XP_002307161.1| predicted protein [Populus trichocarpa] gi|222856610|gb|EEE94157.1|
           predicted protein [Populus trichocarpa]
          Length = 651

 Score =  118 bits (296), Expect = 4e-25
 Identities = 47/61 (77%), Positives = 53/61 (86%)
 Frame = -1

Query: 187 MCHQCQRNDKGRVVQCTKCIWKRYCVPCMTRWYPKMTEDDFAKACPVCQVNCNCKRCLRL 8
           MCHQCQRNDKGRVV+C KC  KRYC+PC+T+WYPKMTED+ A ACPVC  NCNCK CLRL
Sbjct: 1   MCHQCQRNDKGRVVRCLKCKRKRYCIPCLTKWYPKMTEDEIANACPVCLGNCNCKSCLRL 60

Query: 7   E 5
           +
Sbjct: 61  D 61


>ref|XP_002306344.1| predicted protein [Populus trichocarpa] gi|222855793|gb|EEE93340.1|
           predicted protein [Populus trichocarpa]
          Length = 690

 Score =  117 bits (294), Expect = 7e-25
 Identities = 46/61 (75%), Positives = 53/61 (86%)
 Frame = -1

Query: 187 MCHQCQRNDKGRVVQCTKCIWKRYCVPCMTRWYPKMTEDDFAKACPVCQVNCNCKRCLRL 8
           MCHQCQR+DKGRV++C KC  KRYC+PC+T+WYPKMTEDD A ACPVC  NCNCK CLRL
Sbjct: 1   MCHQCQRSDKGRVIRCLKCKRKRYCIPCLTKWYPKMTEDDIASACPVCLGNCNCKSCLRL 60

Query: 7   E 5
           +
Sbjct: 61  D 61


>ref|XP_003636724.1| Lysine-specific demethylase 3B [Medicago truncatula]
           gi|355502659|gb|AES83862.1| Lysine-specific demethylase
           3B [Medicago truncatula]
          Length = 989

 Score =  114 bits (285), Expect = 8e-24
 Identities = 45/61 (73%), Positives = 51/61 (83%)
 Frame = -1

Query: 193 SIMCHQCQRNDKGRVVQCTKCIWKRYCVPCMTRWYPKMTEDDFAKACPVCQVNCNCKRCL 14
           S+MCHQCQRNDKGRVV+CTKC  +RYC+PC+  WYPK+ E D AKACPVC  NCNCK CL
Sbjct: 222 SLMCHQCQRNDKGRVVRCTKCKRRRYCIPCLNNWYPKLKESDIAKACPVCCDNCNCKACL 281

Query: 13  R 11
           R
Sbjct: 282 R 282


>ref|XP_003592698.1| Lysine-specific demethylase 3A [Medicago truncatula]
           gi|355481746|gb|AES62949.1| Lysine-specific demethylase
           3A [Medicago truncatula]
          Length = 895

 Score =  114 bits (285), Expect = 8e-24
 Identities = 45/61 (73%), Positives = 51/61 (83%)
 Frame = -1

Query: 193 SIMCHQCQRNDKGRVVQCTKCIWKRYCVPCMTRWYPKMTEDDFAKACPVCQVNCNCKRCL 14
           S+MCHQCQRNDKGRVV+CTKC  +RYC+PC+  WYPK+ E D AKACPVC  NCNCK CL
Sbjct: 222 SLMCHQCQRNDKGRVVRCTKCKRRRYCIPCLNNWYPKLKESDIAKACPVCCDNCNCKACL 281

Query: 13  R 11
           R
Sbjct: 282 R 282


>ref|XP_003576388.1| PREDICTED: uncharacterized protein LOC100822574 [Brachypodium
           distachyon]
          Length = 1108

 Score =  112 bits (280), Expect = 3e-23
 Identities = 51/102 (50%), Positives = 66/102 (64%), Gaps = 5/102 (4%)
 Frame = -1

Query: 298 DTGEEPGALETVGKTIAAVPKQMGGTMKDDNGQP-----KSIMCHQCQRNDKGRVVQCTK 134
           D+G+ P   E V K + +   +  G  +  NG+       + MCHQCQRNDKGRVV C  
Sbjct: 250 DSGKAPNTEEEVDKQVRSSKNKKSGE-RYKNGKKMLTGENARMCHQCQRNDKGRVVWCKA 308

Query: 133 CIWKRYCVPCMTRWYPKMTEDDFAKACPVCQVNCNCKRCLRL 8
           C  KR+CVPC+T+WYP +TED+FA  CP C+ NCNCK CLR+
Sbjct: 309 CNNKRFCVPCITQWYPDLTEDEFAAKCPYCRKNCNCKSCLRM 350


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