BLASTX nr result
ID: Panax21_contig00000790
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00000790
(990 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABB86267.1| DNA binding protein ACBF-like [Solanum tuberosum] 357 2e-96
gb|AAC49850.1| DNA binding protein ACBF [Nicotiana tabacum] 357 3e-96
gb|AAB92518.1| putative RNA binding protein [Nicotiana tabacum] 357 3e-96
sp|Q9LEB3.1|RBP47_NICPL RecName: Full=Polyadenylate-binding prot... 354 2e-95
emb|CBI32444.3| unnamed protein product [Vitis vinifera] 342 8e-92
>gb|ABB86267.1| DNA binding protein ACBF-like [Solanum tuberosum]
Length = 372
Score = 357 bits (917), Expect = 2e-96
Identities = 174/236 (73%), Positives = 199/236 (84%)
Frame = +3
Query: 282 SSEENKSIWIGDLQTWMDENYLQSCFAPSGEAISVKIIRNKQTGQSERFGFIEFVSHSAA 461
SSE+NK+IWIGDLQ WMDENYL SCF+ +GE ISVKIIRNKQTGQSER+GF+EF +H+AA
Sbjct: 28 SSEDNKTIWIGDLQQWMDENYLHSCFSHAGEVISVKIIRNKQTGQSERYGFVEFNTHAAA 87
Query: 462 EKVLQGYNGTVMPNTDQAFRLNWATFSTGERRQDTGSDLSIFVGDLASDVNDTILHETFA 641
EKVLQ YNGT+MPN +Q FRLNWA FS GE+R +TGSD SIFVGDLASDV DT+L +TFA
Sbjct: 88 EKVLQSYNGTMMPNAEQPFRLNWAAFSAGEKRAETGSDFSIFVGDLASDVTDTMLRDTFA 147
Query: 642 TRYQSVRGAKVVVDTNTGRSKGYGFVRFGDENERSRAMSEMNGQYCSSRPMRIGVATPKK 821
+R+ SV+GAKVVVD NTG SKGYGFVRFGDE+ERSRAM+EMNG YCSSRPMR+GVATPKK
Sbjct: 148 SRFPSVKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGIYCSSRPMRVGVATPKK 207
Query: 822 SSAQQQYSTQXXXXXXXXXXXXXXHQGSLSESDTSNTTIFVGGLDSDVTDEELRQT 989
SAQQQ+S+Q GS S+ D+SNTTIFVGGLDSDVTDEELRQ+
Sbjct: 208 PSAQQQFSSQAVILSGGYASNGSATHGSQSDGDSSNTTIFVGGLDSDVTDEELRQS 263
Score = 62.0 bits (149), Expect = 2e-07
Identities = 52/208 (25%), Positives = 88/208 (42%), Gaps = 25/208 (12%)
Frame = +3
Query: 300 SIWIGDLQTWMDENYLQSCFAPSGEAIS-VKIIRNKQTGQSERFGFIEFVSHSAAEKVLQ 476
SI++GDL + + + L+ FA ++ K++ + TG S+ +GF+ F S + +
Sbjct: 127 SIFVGDLASDVTDTMLRDTFASRFPSVKGAKVVVDANTGHSKGYGFVRFGDESERSRAMT 186
Query: 477 GYNGTVM--------------PNTDQAFRLNWATFSTG----------ERRQDTGSDLSI 584
NG P+ Q F S G + S+ +I
Sbjct: 187 EMNGIYCSSRPMRVGVATPKKPSAQQQFSSQAVILSGGYASNGSATHGSQSDGDSSNTTI 246
Query: 585 FVGDLASDVNDTILHETFATRYQSVRGAKVVVDTNTGRSKGYGFVRFGDENERSRAMSEM 764
FVG L SDV D L ++F T++ V K+ KG GFV+F D + A+ ++
Sbjct: 247 FVGGLDSDVTDEELRQSF-TQFGEVVSVKIPA------GKGCGFVQFSDRSSAQEAIQKL 299
Query: 765 NGQYCSSRPMRIGVATPKKSSAQQQYST 848
+G + +R+ +S A +Q T
Sbjct: 300 SGAIIGKQAVRLSWG---RSPANKQMRT 324
>gb|AAC49850.1| DNA binding protein ACBF [Nicotiana tabacum]
Length = 428
Score = 357 bits (915), Expect = 3e-96
Identities = 175/237 (73%), Positives = 199/237 (83%)
Frame = +3
Query: 279 TSSEENKSIWIGDLQTWMDENYLQSCFAPSGEAISVKIIRNKQTGQSERFGFIEFVSHSA 458
+SSE+NK+IWIGDLQ WMDE+YL SCF+ +GE ISVKIIRNKQTGQSER+GF+EF +H+A
Sbjct: 78 SSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAA 137
Query: 459 AEKVLQGYNGTVMPNTDQAFRLNWATFSTGERRQDTGSDLSIFVGDLASDVNDTILHETF 638
AEKVLQ YNGT+MPN +Q FRLNWA FSTGE+R +TGSD SIFVGDLASDV DT+L +TF
Sbjct: 138 AEKVLQSYNGTMMPNAEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDTMLRDTF 197
Query: 639 ATRYQSVRGAKVVVDTNTGRSKGYGFVRFGDENERSRAMSEMNGQYCSSRPMRIGVATPK 818
A+RY S++GAKVVVD NTG SKGYGFVRFGDE+ERSRAM+EMNG YCSSR MRIGVATPK
Sbjct: 198 ASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRIGVATPK 257
Query: 819 KSSAQQQYSTQXXXXXXXXXXXXXXHQGSLSESDTSNTTIFVGGLDSDVTDEELRQT 989
K SAQQQYS+Q GS S+ D SNTTIFVGGLDSDVTDEELRQ+
Sbjct: 258 KPSAQQQYSSQAVILSGGYASNGAATHGSQSDGDASNTTIFVGGLDSDVTDEELRQS 314
Score = 59.3 bits (142), Expect = 1e-06
Identities = 47/194 (24%), Positives = 84/194 (43%), Gaps = 27/194 (13%)
Frame = +3
Query: 300 SIWIGDLQTWMDENYLQSCFAPSGEAIS-VKIIRNKQTGQSERFGFIEFVSHSAAEKVLQ 476
SI++GDL + + + L+ FA ++ K++ + TG S+ +GF+ F S + +
Sbjct: 178 SIFVGDLASDVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMT 237
Query: 477 GYNGTVMPNTDQAFRLNWAT--------------------------FSTGERRQDTGSDL 578
NG + +A R+ AT + G + S+
Sbjct: 238 EMNGVYC--SSRAMRIGVATPKKPSAQQQYSSQAVILSGGYASNGAATHGSQSDGDASNT 295
Query: 579 SIFVGDLASDVNDTILHETFATRYQSVRGAKVVVDTNTGRSKGYGFVRFGDENERSRAMS 758
+IFVG L SDV D L ++F ++ V K+ KG GFV+F D + A+
Sbjct: 296 TIFVGGLDSDVTDEELRQSF-NQFGEVVSVKIPA------GKGCGFVQFSDRSSAQEAIQ 348
Query: 759 EMNGQYCSSRPMRI 800
+++G + +R+
Sbjct: 349 KLSGAIIGKQAVRL 362
>gb|AAB92518.1| putative RNA binding protein [Nicotiana tabacum]
Length = 482
Score = 357 bits (915), Expect = 3e-96
Identities = 175/237 (73%), Positives = 199/237 (83%)
Frame = +3
Query: 279 TSSEENKSIWIGDLQTWMDENYLQSCFAPSGEAISVKIIRNKQTGQSERFGFIEFVSHSA 458
+SSE+NK+IWIGDLQ WMDE+YL SCF+ +GE ISVKIIRNKQTGQSER+GF+EF +H+A
Sbjct: 132 SSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAA 191
Query: 459 AEKVLQGYNGTVMPNTDQAFRLNWATFSTGERRQDTGSDLSIFVGDLASDVNDTILHETF 638
AEKVLQ YNGT+MPN +Q FRLNWA FSTGE+R +TGSD SIFVGDLASDV DT+L +TF
Sbjct: 192 AEKVLQSYNGTMMPNAEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDTMLRDTF 251
Query: 639 ATRYQSVRGAKVVVDTNTGRSKGYGFVRFGDENERSRAMSEMNGQYCSSRPMRIGVATPK 818
A+RY S++GAKVVVD NTG SKGYGFVRFGDE+ERSRAM+EMNG YCSSR MRIGVATPK
Sbjct: 252 ASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRIGVATPK 311
Query: 819 KSSAQQQYSTQXXXXXXXXXXXXXXHQGSLSESDTSNTTIFVGGLDSDVTDEELRQT 989
K SAQQQYS+Q GS S+ D SNTTIFVGGLDSDVTDEELRQ+
Sbjct: 312 KPSAQQQYSSQAVILSGGYASNGAATHGSQSDGDASNTTIFVGGLDSDVTDEELRQS 368
Score = 59.3 bits (142), Expect = 1e-06
Identities = 47/194 (24%), Positives = 84/194 (43%), Gaps = 27/194 (13%)
Frame = +3
Query: 300 SIWIGDLQTWMDENYLQSCFAPSGEAIS-VKIIRNKQTGQSERFGFIEFVSHSAAEKVLQ 476
SI++GDL + + + L+ FA ++ K++ + TG S+ +GF+ F S + +
Sbjct: 232 SIFVGDLASDVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMT 291
Query: 477 GYNGTVMPNTDQAFRLNWAT--------------------------FSTGERRQDTGSDL 578
NG + +A R+ AT + G + S+
Sbjct: 292 EMNGVYC--SSRAMRIGVATPKKPSAQQQYSSQAVILSGGYASNGAATHGSQSDGDASNT 349
Query: 579 SIFVGDLASDVNDTILHETFATRYQSVRGAKVVVDTNTGRSKGYGFVRFGDENERSRAMS 758
+IFVG L SDV D L ++F ++ V K+ KG GFV+F D + A+
Sbjct: 350 TIFVGGLDSDVTDEELRQSF-NQFGEVVSVKIPA------GKGCGFVQFSDRSSAQEAIQ 402
Query: 759 EMNGQYCSSRPMRI 800
+++G + +R+
Sbjct: 403 KLSGAIIGKQAVRL 416
>sp|Q9LEB3.1|RBP47_NICPL RecName: Full=Polyadenylate-binding protein RBP47;
Short=Poly(A)-binding protein RBP47; AltName:
Full=RNA-binding protein 47; Short=NplRBP47
gi|9663769|emb|CAC01238.1| RNA Binding Protein 47
[Nicotiana plumbaginifolia]
Length = 428
Score = 354 bits (909), Expect = 2e-95
Identities = 173/237 (72%), Positives = 200/237 (84%)
Frame = +3
Query: 279 TSSEENKSIWIGDLQTWMDENYLQSCFAPSGEAISVKIIRNKQTGQSERFGFIEFVSHSA 458
+SSE+NK+IWIGDLQ WMDE+YL SCF+ +GE ISVKIIRNKQTGQSER+GF+EF +H+A
Sbjct: 78 SSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAA 137
Query: 459 AEKVLQGYNGTVMPNTDQAFRLNWATFSTGERRQDTGSDLSIFVGDLASDVNDTILHETF 638
AEKVLQ YNGT+MPNT+Q FRLNWA FSTGE+R +TGSD SIFVGDLASDV DT+L +TF
Sbjct: 138 AEKVLQSYNGTMMPNTEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDTMLRDTF 197
Query: 639 ATRYQSVRGAKVVVDTNTGRSKGYGFVRFGDENERSRAMSEMNGQYCSSRPMRIGVATPK 818
A+RY S++GAKVVVD NTG SKGYGFVRFGDE+ERSRAM+EMNG YCSSR MRIGVATPK
Sbjct: 198 ASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRIGVATPK 257
Query: 819 KSSAQQQYSTQXXXXXXXXXXXXXXHQGSLSESDTSNTTIFVGGLDSDVTDEELRQT 989
K SA +QYS+Q GS S+ D+SNTTIFVGGLDS+VTDEELRQ+
Sbjct: 258 KPSAHEQYSSQAVILSGGYASNGAATHGSQSDGDSSNTTIFVGGLDSEVTDEELRQS 314
Score = 58.2 bits (139), Expect = 3e-06
Identities = 50/210 (23%), Positives = 90/210 (42%), Gaps = 27/210 (12%)
Frame = +3
Query: 300 SIWIGDLQTWMDENYLQSCFAPSGEAIS-VKIIRNKQTGQSERFGFIEFVSHSAAEKVLQ 476
SI++GDL + + + L+ FA ++ K++ + TG S+ +GF+ F S + +
Sbjct: 178 SIFVGDLASDVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMT 237
Query: 477 GYNGTVMPNTDQAFRLNWAT--------------------------FSTGERRQDTGSDL 578
NG + +A R+ AT + G + S+
Sbjct: 238 EMNGVYC--SSRAMRIGVATPKKPSAHEQYSSQAVILSGGYASNGAATHGSQSDGDSSNT 295
Query: 579 SIFVGDLASDVNDTILHETFATRYQSVRGAKVVVDTNTGRSKGYGFVRFGDENERSRAMS 758
+IFVG L S+V D L ++F ++ V K+ KG GFV+F D + A+
Sbjct: 296 TIFVGGLDSEVTDEELRQSF-NQFGEVVSVKIPA------GKGCGFVQFSDRSSAQEAIQ 348
Query: 759 EMNGQYCSSRPMRIGVATPKKSSAQQQYST 848
+++G + +R+ +S A +Q T
Sbjct: 349 KLSGAIIGKQAVRLSWG---RSPANKQMRT 375
>emb|CBI32444.3| unnamed protein product [Vitis vinifera]
Length = 342
Score = 342 bits (877), Expect = 8e-92
Identities = 166/237 (70%), Positives = 195/237 (82%), Gaps = 1/237 (0%)
Frame = +3
Query: 282 SSEENKSIWIGDLQTWMDENYLQSCFAPSGEAISVKIIRNKQTGQSERFGFIEFVSHSAA 461
S++E K++W+GDL WMD+NYL++CF +GE S+KIIRNKQTGQSE +GF+EF S + A
Sbjct: 4 STDEIKTLWVGDLHQWMDDNYLRTCFGHTGEVSSIKIIRNKQTGQSEGYGFVEFFSRATA 63
Query: 462 EKVLQGYNGTVMPNTDQAFRLNWATFSTGERRQDTGSDLSIFVGDLASDVNDTILHETFA 641
EK+L YNGT+MPNT+Q FRLNWATFSTG+RR D GSDLSIFVGDLASDV D +L ETFA
Sbjct: 64 EKILHSYNGTLMPNTEQPFRLNWATFSTGDRRTDAGSDLSIFVGDLASDVTDALLQETFA 123
Query: 642 TRYQSVRGAKVVVDTNTGRSKGYGFVRFGDENERSRAMSEMNGQYCSSRPMRIGVATPKK 821
TRY SV+GAKVV D+NTGRSKGYGFVRFGDENERSRAM+EMNG YCSSRPMRIGVATPKK
Sbjct: 124 TRYPSVKGAKVVTDSNTGRSKGYGFVRFGDENERSRAMNEMNGIYCSSRPMRIGVATPKK 183
Query: 822 SSA-QQQYSTQXXXXXXXXXXXXXXHQGSLSESDTSNTTIFVGGLDSDVTDEELRQT 989
+S QQQYS+Q QGS + D++NTTIFVGGLDS+VTDE+LRQ+
Sbjct: 184 ASGYQQQYSSQALVLAGGNASNGAVAQGSQANGDSTNTTIFVGGLDSEVTDEDLRQS 240
Score = 61.6 bits (148), Expect = 3e-07
Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 26/200 (13%)
Frame = +3
Query: 279 TSSEENKSIWIGDLQTWMDENYLQSCFAPSGEAIS-VKIIRNKQTGQSERFGFIEFVSHS 455
T + + SI++GDL + + + LQ FA ++ K++ + TG+S+ +GF+ F +
Sbjct: 96 TDAGSDLSIFVGDLASDVTDALLQETFATRYPSVKGAKVVTDSNTGRSKGYGFVRFGDEN 155
Query: 456 AAEKVLQGYNGTVMPN--------------------TDQAFRLNWATFSTGERRQDT--- 566
+ + NG + + QA L S G Q +
Sbjct: 156 ERSRAMNEMNGIYCSSRPMRIGVATPKKASGYQQQYSSQALVLAGGNASNGAVAQGSQAN 215
Query: 567 --GSDLSIFVGDLASDVNDTILHETFATRYQSVRGAKVVVDTNTGRSKGYGFVRFGDENE 740
++ +IFVG L S+V D L ++F+ ++ V K+ V KG GFV+F + N
Sbjct: 216 GDSTNTTIFVGGLDSEVTDEDLRQSFS-QFGEVVSVKIPV------GKGCGFVQFANRNS 268
Query: 741 RSRAMSEMNGQYCSSRPMRI 800
A+ +NG + +R+
Sbjct: 269 AEDALQRLNGTVIGKQTVRL 288