BLASTX nr result

ID: Panax21_contig00000779 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000779
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA96068.1| 60S ribosomal protein L27a [Panax ginseng]            246   2e-63
ref|XP_002274098.1| PREDICTED: 60S ribosomal protein L27a-3 [Vit...   228   3e-58
ref|XP_002281019.1| PREDICTED: 60S ribosomal protein L27a-3 isof...   227   7e-58
ref|NP_001237682.1| uncharacterized protein LOC100527293 [Glycin...   227   9e-58
ref|XP_002272813.1| PREDICTED: 60S ribosomal protein L27a-3 [Vit...   227   9e-58

>dbj|BAA96068.1| 60S ribosomal protein L27a [Panax ginseng]
          Length = 146

 Score =  246 bits (627), Expect = 2e-63
 Identities = 114/118 (96%), Positives = 116/118 (98%)
 Frame = -3

Query: 354 GRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNKFYCPIVNIDKLW 175
           GRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFH+LRNKFYCP+VNIDKLW
Sbjct: 20  GRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHRLRNKFYCPVVNIDKLW 79

Query: 174 SLLPQEAKEKADAQNAPVIDVTQHGYFKVLGKGFLPSSQPIVVKAKLVSKNAEKKIKE 1
           SLLPQEAKEKADAQNAPVIDVTQHGYFKVLGKGFLPSS PIVVKAKLVSK AEKKIKE
Sbjct: 80  SLLPQEAKEKADAQNAPVIDVTQHGYFKVLGKGFLPSSHPIVVKAKLVSKTAEKKIKE 137


>ref|XP_002274098.1| PREDICTED: 60S ribosomal protein L27a-3 [Vitis vinifera]
           gi|147783378|emb|CAN59887.1| hypothetical protein
           VITISV_026169 [Vitis vinifera]
          Length = 146

 Score =  228 bits (582), Expect = 3e-58
 Identities = 106/118 (89%), Positives = 111/118 (94%)
 Frame = -3

Query: 354 GRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNKFYCPIVNIDKLW 175
           GRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNKFYCPIVNIDKLW
Sbjct: 20  GRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNKFYCPIVNIDKLW 79

Query: 174 SLLPQEAKEKADAQNAPVIDVTQHGYFKVLGKGFLPSSQPIVVKAKLVSKNAEKKIKE 1
           S++PQ+ K+KA   NAP+IDVTQ GYFKVLGKG LPSSQPIVVKAKLVSK AEKKIKE
Sbjct: 80  SMVPQDVKDKASPDNAPLIDVTQFGYFKVLGKGALPSSQPIVVKAKLVSKIAEKKIKE 137


>ref|XP_002281019.1| PREDICTED: 60S ribosomal protein L27a-3 isoform 1 [Vitis vinifera]
           gi|359491222|ref|XP_003634245.1| PREDICTED: 60S
           ribosomal protein L27a-3 isoform 2 [Vitis vinifera]
           gi|147859771|emb|CAN78902.1| hypothetical protein
           VITISV_026450 [Vitis vinifera]
          Length = 146

 Score =  227 bits (579), Expect = 7e-58
 Identities = 105/118 (88%), Positives = 111/118 (94%)
 Frame = -3

Query: 354 GRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNKFYCPIVNIDKLW 175
           GRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNKFYCPIVNIDKLW
Sbjct: 20  GRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNKFYCPIVNIDKLW 79

Query: 174 SLLPQEAKEKADAQNAPVIDVTQHGYFKVLGKGFLPSSQPIVVKAKLVSKNAEKKIKE 1
           SL+PQ+ K+KA  +NAP+IDVTQ GYFKVLGKG LP S+PIVVKAKLVSK AEKKIKE
Sbjct: 80  SLIPQDVKDKASPENAPLIDVTQFGYFKVLGKGALPESKPIVVKAKLVSKIAEKKIKE 137


>ref|NP_001237682.1| uncharacterized protein LOC100527293 [Glycine max]
           gi|255632023|gb|ACU16364.1| unknown [Glycine max]
          Length = 146

 Score =  227 bits (578), Expect = 9e-58
 Identities = 105/118 (88%), Positives = 111/118 (94%)
 Frame = -3

Query: 354 GRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNKFYCPIVNIDKLW 175
           GRIGKHRKHPGGRGNAGGMHHHRILFDKYHPG+FGKVGMRYFHKLRNKFYCPIVNIDKLW
Sbjct: 20  GRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGFFGKVGMRYFHKLRNKFYCPIVNIDKLW 79

Query: 174 SLLPQEAKEKADAQNAPVIDVTQHGYFKVLGKGFLPSSQPIVVKAKLVSKNAEKKIKE 1
           SLLPQEAK+KA A  AP++DVTQ GYFKVLGKG LP +QP+VVKAKLVSK AEKKIKE
Sbjct: 80  SLLPQEAKDKATADKAPLLDVTQFGYFKVLGKGVLPQNQPLVVKAKLVSKIAEKKIKE 137


>ref|XP_002272813.1| PREDICTED: 60S ribosomal protein L27a-3 [Vitis vinifera]
           gi|147792161|emb|CAN68574.1| hypothetical protein
           VITISV_033684 [Vitis vinifera]
           gi|147799274|emb|CAN61498.1| hypothetical protein
           VITISV_034088 [Vitis vinifera]
          Length = 146

 Score =  227 bits (578), Expect = 9e-58
 Identities = 104/118 (88%), Positives = 110/118 (93%)
 Frame = -3

Query: 354 GRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNKFYCPIVNIDKLW 175
           GRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNKF+CPIVN+DKLW
Sbjct: 20  GRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNKFFCPIVNVDKLW 79

Query: 174 SLLPQEAKEKADAQNAPVIDVTQHGYFKVLGKGFLPSSQPIVVKAKLVSKNAEKKIKE 1
           SL+PQE K KA  +NAP+IDVTQ GY KVLGKGFLP SQPIVVKAKL+SK AEKKIKE
Sbjct: 80  SLIPQEVKAKASPENAPMIDVTQFGYVKVLGKGFLPESQPIVVKAKLISKVAEKKIKE 137


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