BLASTX nr result
ID: Panax21_contig00000767
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00000767 (1067 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABB86267.1| DNA binding protein ACBF-like [Solanum tuberosum] 351 2e-94 gb|AAC49850.1| DNA binding protein ACBF [Nicotiana tabacum] 350 3e-94 gb|AAB92518.1| putative RNA binding protein [Nicotiana tabacum] 350 3e-94 sp|Q9LEB3.1|RBP47_NICPL RecName: Full=Polyadenylate-binding prot... 348 2e-93 emb|CBI32444.3| unnamed protein product [Vitis vinifera] 332 1e-88 >gb|ABB86267.1| DNA binding protein ACBF-like [Solanum tuberosum] Length = 372 Score = 351 bits (900), Expect = 2e-94 Identities = 177/262 (67%), Positives = 202/262 (77%) Frame = -2 Query: 787 IQTSSEENKSIWIGDLQTWMDENYLQSCFAPSGEAISVKIIRNKQTGQSERFGFIEFVSH 608 IQ SSE+NK+IWIGDLQ WMDENYL SCF+ +GE ISVKIIRNKQTGQSER+GF+EF +H Sbjct: 25 IQNSSEDNKTIWIGDLQQWMDENYLHSCFSHAGEVISVKIIRNKQTGQSERYGFVEFNTH 84 Query: 607 AAAEKVLQGYNGTVMPSTDQAFRLNWATFSTGERRQDAGSDLSIFVGDLASDVNDTILHE 428 AAAEKVLQ YNGT+MP+ +Q FRLNWA FS GE+R + GSD SIFVGDLASDV DT+L + Sbjct: 85 AAAEKVLQSYNGTMMPNAEQPFRLNWAAFSAGEKRAETGSDFSIFVGDLASDVTDTMLRD 144 Query: 427 TFATRYQSVRGAKVVVDTNTGRSKGYGFVXXXXXXXXXXXXXXXXSKGYGFVRFGDENER 248 TFA+R+ SV+GAKVVVD NTG SK GYGFVRFGDE+ER Sbjct: 145 TFASRFPSVKGAKVVVDANTGHSK-----------------------GYGFVRFGDESER 181 Query: 247 SRAMSEMNGQYCSSRPMRIGVATPKKPSAQQQYSTQXXXXXXXXXXXXXLHQGSQSESDT 68 SRAM+EMNG YCSSRPMR+GVATPKKPSAQQQ+S+Q GSQS+ D+ Sbjct: 182 SRAMTEMNGIYCSSRPMRVGVATPKKPSAQQQFSSQAVILSGGYASNGSATHGSQSDGDS 241 Query: 67 SNTTIFVGGLDSDVTDEELRQT 2 SNTTIFVGGLDSDVTDEELRQ+ Sbjct: 242 SNTTIFVGGLDSDVTDEELRQS 263 >gb|AAC49850.1| DNA binding protein ACBF [Nicotiana tabacum] Length = 428 Score = 350 bits (898), Expect = 3e-94 Identities = 178/262 (67%), Positives = 202/262 (77%) Frame = -2 Query: 787 IQTSSEENKSIWIGDLQTWMDENYLQSCFAPSGEAISVKIIRNKQTGQSERFGFIEFVSH 608 IQ+SSE+NK+IWIGDLQ WMDE+YL SCF+ +GE ISVKIIRNKQTGQSER+GF+EF +H Sbjct: 76 IQSSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTH 135 Query: 607 AAAEKVLQGYNGTVMPSTDQAFRLNWATFSTGERRQDAGSDLSIFVGDLASDVNDTILHE 428 AAAEKVLQ YNGT+MP+ +Q FRLNWA FSTGE+R + GSD SIFVGDLASDV DT+L + Sbjct: 136 AAAEKVLQSYNGTMMPNAEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDTMLRD 195 Query: 427 TFATRYQSVRGAKVVVDTNTGRSKGYGFVXXXXXXXXXXXXXXXXSKGYGFVRFGDENER 248 TFA+RY S++GAKVVVD NTG SK GYGFVRFGDE+ER Sbjct: 196 TFASRYPSLKGAKVVVDANTGHSK-----------------------GYGFVRFGDESER 232 Query: 247 SRAMSEMNGQYCSSRPMRIGVATPKKPSAQQQYSTQXXXXXXXXXXXXXLHQGSQSESDT 68 SRAM+EMNG YCSSR MRIGVATPKKPSAQQQYS+Q GSQS+ D Sbjct: 233 SRAMTEMNGVYCSSRAMRIGVATPKKPSAQQQYSSQAVILSGGYASNGAATHGSQSDGDA 292 Query: 67 SNTTIFVGGLDSDVTDEELRQT 2 SNTTIFVGGLDSDVTDEELRQ+ Sbjct: 293 SNTTIFVGGLDSDVTDEELRQS 314 >gb|AAB92518.1| putative RNA binding protein [Nicotiana tabacum] Length = 482 Score = 350 bits (898), Expect = 3e-94 Identities = 178/262 (67%), Positives = 202/262 (77%) Frame = -2 Query: 787 IQTSSEENKSIWIGDLQTWMDENYLQSCFAPSGEAISVKIIRNKQTGQSERFGFIEFVSH 608 IQ+SSE+NK+IWIGDLQ WMDE+YL SCF+ +GE ISVKIIRNKQTGQSER+GF+EF +H Sbjct: 130 IQSSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTH 189 Query: 607 AAAEKVLQGYNGTVMPSTDQAFRLNWATFSTGERRQDAGSDLSIFVGDLASDVNDTILHE 428 AAAEKVLQ YNGT+MP+ +Q FRLNWA FSTGE+R + GSD SIFVGDLASDV DT+L + Sbjct: 190 AAAEKVLQSYNGTMMPNAEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDTMLRD 249 Query: 427 TFATRYQSVRGAKVVVDTNTGRSKGYGFVXXXXXXXXXXXXXXXXSKGYGFVRFGDENER 248 TFA+RY S++GAKVVVD NTG SK GYGFVRFGDE+ER Sbjct: 250 TFASRYPSLKGAKVVVDANTGHSK-----------------------GYGFVRFGDESER 286 Query: 247 SRAMSEMNGQYCSSRPMRIGVATPKKPSAQQQYSTQXXXXXXXXXXXXXLHQGSQSESDT 68 SRAM+EMNG YCSSR MRIGVATPKKPSAQQQYS+Q GSQS+ D Sbjct: 287 SRAMTEMNGVYCSSRAMRIGVATPKKPSAQQQYSSQAVILSGGYASNGAATHGSQSDGDA 346 Query: 67 SNTTIFVGGLDSDVTDEELRQT 2 SNTTIFVGGLDSDVTDEELRQ+ Sbjct: 347 SNTTIFVGGLDSDVTDEELRQS 368 >sp|Q9LEB3.1|RBP47_NICPL RecName: Full=Polyadenylate-binding protein RBP47; Short=Poly(A)-binding protein RBP47; AltName: Full=RNA-binding protein 47; Short=NplRBP47 gi|9663769|emb|CAC01238.1| RNA Binding Protein 47 [Nicotiana plumbaginifolia] Length = 428 Score = 348 bits (892), Expect = 2e-93 Identities = 176/262 (67%), Positives = 203/262 (77%) Frame = -2 Query: 787 IQTSSEENKSIWIGDLQTWMDENYLQSCFAPSGEAISVKIIRNKQTGQSERFGFIEFVSH 608 IQ+SSE+NK+IWIGDLQ WMDE+YL SCF+ +GE ISVKIIRNKQTGQSER+GF+EF +H Sbjct: 76 IQSSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTH 135 Query: 607 AAAEKVLQGYNGTVMPSTDQAFRLNWATFSTGERRQDAGSDLSIFVGDLASDVNDTILHE 428 AAAEKVLQ YNGT+MP+T+Q FRLNWA FSTGE+R + GSD SIFVGDLASDV DT+L + Sbjct: 136 AAAEKVLQSYNGTMMPNTEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDTMLRD 195 Query: 427 TFATRYQSVRGAKVVVDTNTGRSKGYGFVXXXXXXXXXXXXXXXXSKGYGFVRFGDENER 248 TFA+RY S++GAKVVVD NTG SK GYGFVRFGDE+ER Sbjct: 196 TFASRYPSLKGAKVVVDANTGHSK-----------------------GYGFVRFGDESER 232 Query: 247 SRAMSEMNGQYCSSRPMRIGVATPKKPSAQQQYSTQXXXXXXXXXXXXXLHQGSQSESDT 68 SRAM+EMNG YCSSR MRIGVATPKKPSA +QYS+Q GSQS+ D+ Sbjct: 233 SRAMTEMNGVYCSSRAMRIGVATPKKPSAHEQYSSQAVILSGGYASNGAATHGSQSDGDS 292 Query: 67 SNTTIFVGGLDSDVTDEELRQT 2 SNTTIFVGGLDS+VTDEELRQ+ Sbjct: 293 SNTTIFVGGLDSEVTDEELRQS 314 >emb|CBI32444.3| unnamed protein product [Vitis vinifera] Length = 342 Score = 332 bits (850), Expect = 1e-88 Identities = 168/260 (64%), Positives = 197/260 (75%), Gaps = 1/260 (0%) Frame = -2 Query: 778 SSEENKSIWIGDLQTWMDENYLQSCFAPSGEAISVKIIRNKQTGQSERFGFIEFVSHAAA 599 S++E K++W+GDL WMD+NYL++CF +GE S+KIIRNKQTGQSE +GF+EF S A A Sbjct: 4 STDEIKTLWVGDLHQWMDDNYLRTCFGHTGEVSSIKIIRNKQTGQSEGYGFVEFFSRATA 63 Query: 598 EKVLQGYNGTVMPSTDQAFRLNWATFSTGERRQDAGSDLSIFVGDLASDVNDTILHETFA 419 EK+L YNGT+MP+T+Q FRLNWATFSTG+RR DAGSDLSIFVGDLASDV D +L ETFA Sbjct: 64 EKILHSYNGTLMPNTEQPFRLNWATFSTGDRRTDAGSDLSIFVGDLASDVTDALLQETFA 123 Query: 418 TRYQSVRGAKVVVDTNTGRSKGYGFVXXXXXXXXXXXXXXXXSKGYGFVRFGDENERSRA 239 TRY SV+GAKVV D+NTGRSK GYGFVRFGDENERSRA Sbjct: 124 TRYPSVKGAKVVTDSNTGRSK-----------------------GYGFVRFGDENERSRA 160 Query: 238 MSEMNGQYCSSRPMRIGVATPKKPSA-QQQYSTQXXXXXXXXXXXXXLHQGSQSESDTSN 62 M+EMNG YCSSRPMRIGVATPKK S QQQYS+Q + QGSQ+ D++N Sbjct: 161 MNEMNGIYCSSRPMRIGVATPKKASGYQQQYSSQALVLAGGNASNGAVAQGSQANGDSTN 220 Query: 61 TTIFVGGLDSDVTDEELRQT 2 TTIFVGGLDS+VTDE+LRQ+ Sbjct: 221 TTIFVGGLDSEVTDEDLRQS 240