BLASTX nr result

ID: Panax21_contig00000749 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000749
         (723 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22123.3| unnamed protein product [Vitis vinifera]               87   3e-15
emb|CAN73670.1| hypothetical protein VITISV_031857 [Vitis vinifera]    87   3e-15
ref|XP_002327642.1| predicted protein [Populus trichocarpa] gi|2...    70   4e-10
emb|CAA18483.1| putative protein [Arabidopsis thaliana] gi|38058...    69   7e-10
ref|XP_002869052.1| La domain-containing protein [Arabidopsis ly...    69   7e-10

>emb|CBI22123.3| unnamed protein product [Vitis vinifera]
          Length = 568

 Score = 87.4 bits (215), Expect = 3e-15
 Identities = 73/219 (33%), Positives = 94/219 (42%), Gaps = 24/219 (10%)
 Frame = -3

Query: 586 WTQIVGGVASVLEHIPSS----------SSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 437
           WTQ+V G +  +   PSS          SSD                             
Sbjct: 41  WTQVVRGESESITAAPSSPVSSQEQIVVSSDCSPTKATSDSPASPEDSSQVEAQLESSDN 100

Query: 436 XDNNAAKKQAWKKPSNGNGNGGTAVEVSPVMDTALWPALSACTXXXXXXXXXXXXXXXSE 257
            + NA K+ AW KPSNG        EV PVM  + WPALS  +               ++
Sbjct: 101 GNGNAGKRPAWNKPSNG------VAEVGPVMGASSWPALSE-SARASAKSASDSLKSPTD 153

Query: 256 GSL------LPSQGSGVASLSSNKPVIPNNANPNSTPNHVIPTRQRSIKRG-------ST 116
           GS+      +  QGSG AS  S+K V  NN  P+STP+H +PTRQ+S+KRG       S 
Sbjct: 154 GSISTPPAQVHVQGSGNASSPSHKQV-NNNPIPSSTPSHALPTRQKSMKRGDRSGGSSSA 212

Query: 115 NGGFIQPSPPLQSQGPAVEMPPGKLGNTTGESSS-HKEG 2
           N G  QP+ P   QGP +E+PP         + S H EG
Sbjct: 213 NAGLPQPAAP---QGPVMEVPPNNSSPRDHTNRSIHPEG 248


>emb|CAN73670.1| hypothetical protein VITISV_031857 [Vitis vinifera]
          Length = 404

 Score = 87.4 bits (215), Expect = 3e-15
 Identities = 73/219 (33%), Positives = 94/219 (42%), Gaps = 24/219 (10%)
 Frame = -3

Query: 586 WTQIVGGVASVLEHIPSS----------SSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 437
           WTQ+V G +  +   PSS          SSD                             
Sbjct: 41  WTQVVRGESESITAAPSSPVSSQEQIVVSSDCSPTKATSDSPASPEDSSQVEAQLESSDN 100

Query: 436 XDNNAAKKQAWKKPSNGNGNGGTAVEVSPVMDTALWPALSACTXXXXXXXXXXXXXXXSE 257
            + NA K+ AW KPSNG        EV PVM  + WPALS  +               ++
Sbjct: 101 GNGNAGKRPAWNKPSNG------VAEVGPVMGASSWPALSE-SARASAKSASDSLKGPTD 153

Query: 256 GSL------LPSQGSGVASLSSNKPVIPNNANPNSTPNHVIPTRQRSIKRG-------ST 116
           GS+      +  QGSG AS  S+K V  NN  P+STP+H +PTRQ+S+KRG       S 
Sbjct: 154 GSISTPPAQVHVQGSGNASSPSHKQV-NNNPIPSSTPSHALPTRQKSMKRGDRSGGSSSA 212

Query: 115 NGGFIQPSPPLQSQGPAVEMPPGKLGNTTGESSS-HKEG 2
           N G  QP+ P   QGP +E+PP         + S H EG
Sbjct: 213 NAGLPQPAAP---QGPVMEVPPNNSSPRDHTNRSIHPEG 248


>ref|XP_002327642.1| predicted protein [Populus trichocarpa] gi|222836727|gb|EEE75120.1|
           predicted protein [Populus trichocarpa]
          Length = 550

 Score = 70.1 bits (170), Expect = 4e-10
 Identities = 53/149 (35%), Positives = 68/149 (45%), Gaps = 6/149 (4%)
 Frame = -3

Query: 430 NNAAKKQAWKKPSNGNGNGGTAVEVSPVMDTALWPALS------ACTXXXXXXXXXXXXX 269
           NNA+K+  W KP   + NG   VE+  VM    WPALS      + +             
Sbjct: 89  NNASKRPVWNKPLTAS-NG--PVEIGNVMGADSWPALSESAARASSSTKSSSDSLKGSLS 145

Query: 268 XXSEGSLLPSQGSGVASLSSNKPVIPNNANPNSTPNHVIPTRQRSIKRGSTNGGFIQPSP 89
             S  S+  SQG G AS SS K V  N+AN NST NH++P RQRS+KR   N        
Sbjct: 146 DGSSSSVSVSQGIGTASSSSQKQVA-NSANTNSTSNHIVPVRQRSMKRSGAN-------- 196

Query: 88  PLQSQGPAVEMPPGKLGNTTGESSSHKEG 2
              S G A + P  +     G S++   G
Sbjct: 197 -TTSNGGAPQSPGSQGATGEGHSNNSSSG 224


>emb|CAA18483.1| putative protein [Arabidopsis thaliana] gi|3805855|emb|CAA21475.1|
           putative protein [Arabidopsis thaliana]
           gi|7270541|emb|CAB81498.1| putative protein [Arabidopsis
           thaliana]
          Length = 472

 Score = 69.3 bits (168), Expect = 7e-10
 Identities = 53/140 (37%), Positives = 64/140 (45%), Gaps = 14/140 (10%)
 Frame = -3

Query: 430 NNAAKKQAWKKPSNGNGNGGTAVEVSPVMDTALWPALSACTXXXXXXXXXXXXXXXSEGS 251
           +NA KK  WK+PSNG      A EV PVM  + WPALS  T                +  
Sbjct: 108 DNAGKKPVWKRPSNG------ASEVGPVMGASSWPALSETTKAPSNKSSSDSLKSLGD-- 159

Query: 250 LLPSQGS---------GVASLSSNKPVIPNNANPNSTPNHVIPTRQRSIKR-----GSTN 113
            +PS  S         G+A+ S   P     ANPN TPNH   +RQRS K+     GS N
Sbjct: 160 -VPSSSSASSSVPVTQGIANASVPAPKQAGRANPNPTPNH---SRQRSFKQRNGASGSAN 215

Query: 112 GGFIQPSPPLQSQGPAVEMP 53
           G   QPS    +QG   E+P
Sbjct: 216 GTVSQPS----AQGSFTELP 231


>ref|XP_002869052.1| La domain-containing protein [Arabidopsis lyrata subsp. lyrata]
           gi|297314888|gb|EFH45311.1| La domain-containing protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 526

 Score = 69.3 bits (168), Expect = 7e-10
 Identities = 58/158 (36%), Positives = 70/158 (44%), Gaps = 16/158 (10%)
 Frame = -3

Query: 427 NAAKKQAWKKPSNGNGNGGTAVEVSPVMDTALWPALSACTXXXXXXXXXXXXXXXSEGSL 248
           NA KK  WK+PSNG      A EV PVM  + WPALS  T                +   
Sbjct: 109 NAGKKPVWKRPSNG------ASEVGPVMGASSWPALSETTKAPSNKSSSDSLKSLGD--- 159

Query: 247 LPSQGS--------GVASLSSNKPVIPNNANPNSTPNHVIPTRQRSIKR----GSTNGGF 104
           +PS  +        G+A+ S   P   + ANPN T NH   +RQRS KR    GS NG  
Sbjct: 160 VPSSSASSSVPVSQGIANASVTAPKQASRANPNPTQNH---SRQRSFKRNGASGSANGTV 216

Query: 103 IQPSPPLQSQGPAVEMP---PGKLG-NTTGESSSHKEG 2
            QPS    +QG   E+P   P   G N     +SH  G
Sbjct: 217 SQPS----AQGSFAELPSHNPSPRGQNQKNGFASHNHG 250