BLASTX nr result

ID: Panax21_contig00000745 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000745
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331434.1| predicted protein [Populus trichocarpa] gi|2...    63   1e-15
ref|XP_004163055.1| PREDICTED: uncharacterized WD repeat-contain...    62   1e-15
ref|XP_004152858.1| PREDICTED: uncharacterized WD repeat-contain...    62   1e-15
ref|XP_003532316.1| PREDICTED: WD repeat-containing protein 36-l...    61   1e-14
ref|XP_002534411.1| WD-repeat protein, putative [Ricinus communi...    59   1e-14

>ref|XP_002331434.1| predicted protein [Populus trichocarpa] gi|222873648|gb|EEF10779.1|
           predicted protein [Populus trichocarpa]
          Length = 906

 Score = 63.2 bits (152), Expect(2) = 1e-15
 Identities = 37/49 (75%), Positives = 39/49 (79%), Gaps = 9/49 (18%)
 Frame = -3

Query: 390 LCIR--------LSAGQD*AFR-FSVIQDQQSRELSQHHVSKRAKKLKL 271
           LCIR        LSAGQD AFR FSVIQDQQSRELSQHHVSKRAKKL++
Sbjct: 318 LCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQHHVSKRAKKLRV 366



 Score = 44.7 bits (104), Expect(2) = 1e-15
 Identities = 17/23 (73%), Positives = 21/23 (91%)
 Frame = -1

Query: 461 MWIFNTTDGNPHLLRFQCGHSAP 393
           MW+F+TTDG+P LLRF+ GHSAP
Sbjct: 294 MWVFDTTDGDPRLLRFRSGHSAP 316


>ref|XP_004163055.1| PREDICTED: uncharacterized WD repeat-containing protein
           C1672.07-like [Cucumis sativus]
          Length = 891

 Score = 62.4 bits (150), Expect(2) = 1e-15
 Identities = 38/49 (77%), Positives = 38/49 (77%), Gaps = 9/49 (18%)
 Frame = -3

Query: 390 LCIR--------LSAGQD*AFR-FSVIQDQQSRELSQHHVSKRAKKLKL 271
           LCIR        LSAGQD AFR FSVIQDQQSRELSQ HVSKRAKKLKL
Sbjct: 318 LCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVSKRAKKLKL 366



 Score = 45.1 bits (105), Expect(2) = 1e-15
 Identities = 18/23 (78%), Positives = 21/23 (91%)
 Frame = -1

Query: 461 MWIFNTTDGNPHLLRFQCGHSAP 393
           MWIF+TTDG+P LLRF+ GHSAP
Sbjct: 294 MWIFDTTDGDPRLLRFRSGHSAP 316


>ref|XP_004152858.1| PREDICTED: uncharacterized WD repeat-containing protein
           C1672.07-like [Cucumis sativus]
          Length = 891

 Score = 62.4 bits (150), Expect(2) = 1e-15
 Identities = 38/49 (77%), Positives = 38/49 (77%), Gaps = 9/49 (18%)
 Frame = -3

Query: 390 LCIR--------LSAGQD*AFR-FSVIQDQQSRELSQHHVSKRAKKLKL 271
           LCIR        LSAGQD AFR FSVIQDQQSRELSQ HVSKRAKKLKL
Sbjct: 318 LCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVSKRAKKLKL 366



 Score = 45.1 bits (105), Expect(2) = 1e-15
 Identities = 18/23 (78%), Positives = 21/23 (91%)
 Frame = -1

Query: 461 MWIFNTTDGNPHLLRFQCGHSAP 393
           MWIF+TTDG+P LLRF+ GHSAP
Sbjct: 294 MWIFDTTDGDPRLLRFRSGHSAP 316


>ref|XP_003532316.1| PREDICTED: WD repeat-containing protein 36-like [Glycine max]
          Length = 907

 Score = 60.8 bits (146), Expect(2) = 1e-14
 Identities = 33/37 (89%), Positives = 34/37 (91%), Gaps = 1/37 (2%)
 Frame = -3

Query: 378 LSAGQD*AFR-FSVIQDQQSRELSQHHVSKRAKKLKL 271
           LSAGQD AFR FSV+QDQQSRELSQ HVSKRAKKLKL
Sbjct: 330 LSAGQDRAFRLFSVVQDQQSRELSQRHVSKRAKKLKL 366



 Score = 43.5 bits (101), Expect(2) = 1e-14
 Identities = 17/23 (73%), Positives = 21/23 (91%)
 Frame = -1

Query: 461 MWIFNTTDGNPHLLRFQCGHSAP 393
           MWIF+T+DG+P LLRF+ GHSAP
Sbjct: 294 MWIFDTSDGDPRLLRFRSGHSAP 316


>ref|XP_002534411.1| WD-repeat protein, putative [Ricinus communis]
           gi|223525346|gb|EEF27972.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 906

 Score = 59.3 bits (142), Expect(2) = 1e-14
 Identities = 31/37 (83%), Positives = 34/37 (91%), Gaps = 1/37 (2%)
 Frame = -3

Query: 378 LSAGQD*AFR-FSVIQDQQSRELSQHHVSKRAKKLKL 271
           LSAGQD AFR FS+IQDQQSRELSQ H+SKRAKKL+L
Sbjct: 330 LSAGQDRAFRLFSIIQDQQSRELSQRHISKRAKKLRL 366



 Score = 45.1 bits (105), Expect(2) = 1e-14
 Identities = 18/23 (78%), Positives = 21/23 (91%)
 Frame = -1

Query: 461 MWIFNTTDGNPHLLRFQCGHSAP 393
           MWIF+TTDG+P LLRF+ GHSAP
Sbjct: 294 MWIFDTTDGDPRLLRFRSGHSAP 316


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