BLASTX nr result

ID: Panax21_contig00000740 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000740
         (542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32841.3| unnamed protein product [Vitis vinifera]              320   1e-85
ref|XP_002278416.2| PREDICTED: transcription elongation factor S...   306   2e-81
ref|XP_002322597.1| global transcription factor group [Populus t...   296   1e-78
ref|XP_002307949.1| global transcription factor group [Populus t...   291   6e-77
ref|XP_004171804.1| PREDICTED: transcription elongation factor S...   290   7e-77

>emb|CBI32841.3| unnamed protein product [Vitis vinifera]
          Length = 1646

 Score =  320 bits (819), Expect = 1e-85
 Identities = 156/180 (86%), Positives = 167/180 (92%)
 Frame = -3

Query: 540 DEESRSMYDETMLNLNKQLFESITKSLKAAESELEVDDVDSKFNLHFPPGEVGVEEGKYK 361
           +EESR +YDET L+LN+QLFESI KSLKAAESE EVDD DSKFNLHFPPGEVGV+EG+YK
Sbjct: 428 EEESRRIYDETRLSLNQQLFESIIKSLKAAESEREVDDADSKFNLHFPPGEVGVDEGQYK 487

Query: 360 RPKRKSQYSSCSKVGLWEVASKFGYSSEQFGLQISLEKMRMDELENAKETPEEMASNFTC 181
           RPKRKSQYS CSK GLWEVA+KFGYSSEQFGLQISLEKMRMDELE+AKE PEEMASNFTC
Sbjct: 488 RPKRKSQYSICSKAGLWEVANKFGYSSEQFGLQISLEKMRMDELEDAKEPPEEMASNFTC 547

Query: 180 AMFETPQNVLRGARHMAAVEISCEPCVRKHVRSIFMDNVVVSTSPTSDGNVAIDIFHQYA 1
           AMFETPQ VL+GARHMAAVEISCEPCVRKHVRSI+MDN VVSTSPT DGNV ID FHQ+A
Sbjct: 548 AMFETPQAVLKGARHMAAVEISCEPCVRKHVRSIYMDNAVVSTSPTPDGNVVIDAFHQFA 607


>ref|XP_002278416.2| PREDICTED: transcription elongation factor SPT6-like [Vitis
           vinifera]
          Length = 1660

 Score =  306 bits (783), Expect = 2e-81
 Identities = 152/180 (84%), Positives = 163/180 (90%)
 Frame = -3

Query: 540 DEESRSMYDETMLNLNKQLFESITKSLKAAESELEVDDVDSKFNLHFPPGEVGVEEGKYK 361
           +EESR +YDET L+LN+QLFESI KSLKAAESE EVDD DSKFNLHFPPGEVGV+EG+YK
Sbjct: 427 EEESRRIYDETRLSLNQQLFESIIKSLKAAESEREVDDADSKFNLHFPPGEVGVDEGQYK 486

Query: 360 RPKRKSQYSSCSKVGLWEVASKFGYSSEQFGLQISLEKMRMDELENAKETPEEMASNFTC 181
           RPKRKSQYS CSK GLWEVA+KFGYSSEQFGLQISLEKM    LE+AKE PEEMASNFTC
Sbjct: 487 RPKRKSQYSICSKAGLWEVANKFGYSSEQFGLQISLEKM----LEDAKEPPEEMASNFTC 542

Query: 180 AMFETPQNVLRGARHMAAVEISCEPCVRKHVRSIFMDNVVVSTSPTSDGNVAIDIFHQYA 1
           AMFETPQ VL+GARHMAAVEISCEPCVRKHVRSI+MDN VVSTSPT DGNV ID FHQ+A
Sbjct: 543 AMFETPQAVLKGARHMAAVEISCEPCVRKHVRSIYMDNAVVSTSPTPDGNVVIDAFHQFA 602


>ref|XP_002322597.1| global transcription factor group [Populus trichocarpa]
           gi|222867227|gb|EEF04358.1| global transcription factor
           group [Populus trichocarpa]
          Length = 1216

 Score =  296 bits (759), Expect = 1e-78
 Identities = 143/180 (79%), Positives = 163/180 (90%)
 Frame = -3

Query: 540 DEESRSMYDETMLNLNKQLFESITKSLKAAESELEVDDVDSKFNLHFPPGEVGVEEGKYK 361
           +EESR +YDET LNLN+QLFESI KSLK AESE EVDDVD+KFNLHFPPGEVG +EG+YK
Sbjct: 211 EEESRRIYDETRLNLNQQLFESILKSLKTAESEREVDDVDAKFNLHFPPGEVGADEGQYK 270

Query: 360 RPKRKSQYSSCSKVGLWEVASKFGYSSEQFGLQISLEKMRMDELENAKETPEEMASNFTC 181
           RP R+SQYS CSK GLWEVASKFGYS+EQ G+Q+SL  ++MDEL++AKETPEEMASNFTC
Sbjct: 271 RPMRRSQYSICSKAGLWEVASKFGYSAEQLGMQLSL--LKMDELQDAKETPEEMASNFTC 328

Query: 180 AMFETPQNVLRGARHMAAVEISCEPCVRKHVRSIFMDNVVVSTSPTSDGNVAIDIFHQYA 1
           AMFE+PQ VL+GARHMAAVEISCEPCVR++VR IFMDN VVSTSPT+DGN AID FHQ+A
Sbjct: 329 AMFESPQTVLKGARHMAAVEISCEPCVRRYVRFIFMDNAVVSTSPTADGNAAIDSFHQFA 388


>ref|XP_002307949.1| global transcription factor group [Populus trichocarpa]
           gi|222853925|gb|EEE91472.1| global transcription factor
           group [Populus trichocarpa]
          Length = 1648

 Score =  291 bits (744), Expect = 6e-77
 Identities = 143/180 (79%), Positives = 160/180 (88%)
 Frame = -3

Query: 540 DEESRSMYDETMLNLNKQLFESITKSLKAAESELEVDDVDSKFNLHFPPGEVGVEEGKYK 361
           +EESR +YDET LNLN+QLFESI KSLK AESE EVDDVD+KFNLHFPPGEV V+EG+YK
Sbjct: 414 EEESRRIYDETRLNLNQQLFESILKSLKTAESEREVDDVDAKFNLHFPPGEVVVDEGQYK 473

Query: 360 RPKRKSQYSSCSKVGLWEVASKFGYSSEQFGLQISLEKMRMDELENAKETPEEMASNFTC 181
           RP R+SQYS CSK GLWEVASKFGYS+EQ G+Q+SL KM  DEL++AKETPEEMASNFTC
Sbjct: 474 RPMRRSQYSVCSKAGLWEVASKFGYSAEQLGMQLSLLKME-DELQDAKETPEEMASNFTC 532

Query: 180 AMFETPQNVLRGARHMAAVEISCEPCVRKHVRSIFMDNVVVSTSPTSDGNVAIDIFHQYA 1
           AMFE+PQ VL+GARHMAAVEISCEPCVR++VR IFMD  VVSTSPTSDG  AID FHQ+A
Sbjct: 533 AMFESPQTVLKGARHMAAVEISCEPCVRRYVRLIFMDKAVVSTSPTSDGKAAIDSFHQFA 592


>ref|XP_004171804.1| PREDICTED: transcription elongation factor SPT6-like, partial
           [Cucumis sativus]
          Length = 1322

 Score =  290 bits (743), Expect = 7e-77
 Identities = 140/179 (78%), Positives = 158/179 (88%)
 Frame = -3

Query: 537 EESRSMYDETMLNLNKQLFESITKSLKAAESELEVDDVDSKFNLHFPPGEVGVEEGKYKR 358
           EE R+    T   LN+QLF+S+ +SL+AAESE EVDDVDSKFNLHFPPGEVGV+EG++KR
Sbjct: 411 EEIRTAEHVTRTTLNRQLFDSVNRSLEAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKR 470

Query: 357 PKRKSQYSSCSKVGLWEVASKFGYSSEQFGLQISLEKMRMDELENAKETPEEMASNFTCA 178
           PKRKS YS CSK GLWEVA KFGYSSEQFGLQ+SLEKMR DELE+ KETPEEMASNFTCA
Sbjct: 471 PKRKSLYSICSKAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCA 530

Query: 177 MFETPQNVLRGARHMAAVEISCEPCVRKHVRSIFMDNVVVSTSPTSDGNVAIDIFHQYA 1
           MFE+PQ VL+GARHMAA+EISCEPCVRKHVRS FMD  V+STSPT+DGNVAID FHQ++
Sbjct: 531 MFESPQAVLKGARHMAAIEISCEPCVRKHVRSYFMDYAVISTSPTADGNVAIDSFHQFS 589


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