BLASTX nr result

ID: Panax21_contig00000728 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000728
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516869.1| conserved hypothetical protein [Ricinus comm...   124   6e-27
ref|XP_002516870.1| conserved hypothetical protein [Ricinus comm...   123   1e-26
emb|CBI26110.3| unnamed protein product [Vitis vinifera]              116   2e-24
ref|XP_002276323.1| PREDICTED: uncharacterized protein LOC100261...   116   2e-24
ref|XP_002312753.1| f-box family protein [Populus trichocarpa] g...   116   2e-24

>ref|XP_002516869.1| conserved hypothetical protein [Ricinus communis]
           gi|223543957|gb|EEF45483.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 249

 Score =  124 bits (312), Expect = 6e-27
 Identities = 64/126 (50%), Positives = 79/126 (62%), Gaps = 3/126 (2%)
 Frame = -1

Query: 370 LGSCSKFWRELCGSDCVWTSLCRDRWP---LLILDKELSALTHQFYQHESSLKGWRGFYI 200
           LGSCS+ WRELC SDC+W SL + RWP   L  L    S+ T      +  +KGWR  Y+
Sbjct: 33  LGSCSRLWRELCRSDCLWESLTKQRWPSVSLPFLCNSSSSTT------DPLVKGWREIYV 86

Query: 199 TKHNEMACKAAMVVEFLKKGLSSGSIEVGHYLTAIKDLYSMQFGFKDIQMFFLKAEVNVL 20
             H EMA KA  +VEF++      S+EVG Y  A++DLYSMQ  F D+QMF  K  +NVL
Sbjct: 87  RLHEEMAGKATALVEFVEHSSPYDSLEVGEYYKALQDLYSMQLAFTDVQMFLFKPRLNVL 146

Query: 19  LNLVGL 2
           LNLVGL
Sbjct: 147 LNLVGL 152


>ref|XP_002516870.1| conserved hypothetical protein [Ricinus communis]
           gi|223543958|gb|EEF45484.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 259

 Score =  123 bits (309), Expect = 1e-26
 Identities = 65/124 (52%), Positives = 79/124 (63%), Gaps = 1/124 (0%)
 Frame = -1

Query: 370 LGSCSKFWRELCGSDCVWTSLCRDRWPLL-ILDKELSALTHQFYQHESSLKGWRGFYITK 194
           LGSCS+FWRELCGSDC+W SL R+RWP L  L+  +S             K WR  YI  
Sbjct: 32  LGSCSRFWRELCGSDCIWESLTRERWPSLSFLNNPIS-------------KDWREIYIRT 78

Query: 193 HNEMACKAAMVVEFLKKGLSSGSIEVGHYLTAIKDLYSMQFGFKDIQMFFLKAEVNVLLN 14
           H EM  KA  V+ F++    S S+EVG Y  AI+DL SMQ  F+DIQMF  K +++VLLN
Sbjct: 79  HKEMEGKATSVIVFVEHCSLSESLEVGEYYKAIEDLDSMQISFRDIQMFLFKPKLSVLLN 138

Query: 13  LVGL 2
           LVGL
Sbjct: 139 LVGL 142


>emb|CBI26110.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score =  116 bits (290), Expect = 2e-24
 Identities = 61/123 (49%), Positives = 79/123 (64%)
 Frame = -1

Query: 370 LGSCSKFWRELCGSDCVWTSLCRDRWPLLILDKELSALTHQFYQHESSLKGWRGFYITKH 191
           LGSCS+ WREL GSD +W  LCRDRW +  +  E SA      +     +GW+ FYI  H
Sbjct: 611 LGSCSRSWRELWGSDPIWERLCRDRWSVQCMLGESSAS-----ELHPPKEGWKSFYIKWH 665

Query: 190 NEMACKAAMVVEFLKKGLSSGSIEVGHYLTAIKDLYSMQFGFKDIQMFFLKAEVNVLLNL 11
           +EMA +A  VV F++   SS S+EVG +L AI  L   Q GFKD+Q+F  K ++NVL+NL
Sbjct: 666 HEMAGRATDVVRFVESRSSSESLEVGDHLKAIVGLRDRQLGFKDVQIFLFKPKLNVLINL 725

Query: 10  VGL 2
           VGL
Sbjct: 726 VGL 728


>ref|XP_002276323.1| PREDICTED: uncharacterized protein LOC100261360 [Vitis vinifera]
          Length = 246

 Score =  116 bits (290), Expect = 2e-24
 Identities = 61/123 (49%), Positives = 79/123 (64%)
 Frame = -1

Query: 370 LGSCSKFWRELCGSDCVWTSLCRDRWPLLILDKELSALTHQFYQHESSLKGWRGFYITKH 191
           LGSCS+ WREL GSD +W  LCRDRW +  +  E SA      +     +GW+ FYI  H
Sbjct: 31  LGSCSRSWRELWGSDPIWERLCRDRWSVQCMLGESSAS-----ELHPPKEGWKSFYIKWH 85

Query: 190 NEMACKAAMVVEFLKKGLSSGSIEVGHYLTAIKDLYSMQFGFKDIQMFFLKAEVNVLLNL 11
           +EMA +A  VV F++   SS S+EVG +L AI  L   Q GFKD+Q+F  K ++NVL+NL
Sbjct: 86  HEMAGRATDVVRFVESRSSSESLEVGDHLKAIVGLRDRQLGFKDVQIFLFKPKLNVLINL 145

Query: 10  VGL 2
           VGL
Sbjct: 146 VGL 148


>ref|XP_002312753.1| f-box family protein [Populus trichocarpa]
           gi|222852573|gb|EEE90120.1| f-box family protein
           [Populus trichocarpa]
          Length = 244

 Score =  116 bits (290), Expect = 2e-24
 Identities = 63/127 (49%), Positives = 77/127 (60%), Gaps = 4/127 (3%)
 Frame = -1

Query: 370 LGSCSKFWRELCGSDCVWTSLCRDRWPLLILDKELSALTHQFYQHESSL----KGWRGFY 203
           LGSCS+FWR+ CGSD +W SL + RWP L               H SS     KGW+  Y
Sbjct: 32  LGSCSQFWRDSCGSDSIWESLTKQRWPSL---------------HSSSFDPNTKGWKEIY 76

Query: 202 ITKHNEMACKAAMVVEFLKKGLSSGSIEVGHYLTAIKDLYSMQFGFKDIQMFFLKAEVNV 23
           I  H E A  AA VV F+++   S SI+VG Y  AI+DL SMQ  F+D+QMF  K ++NV
Sbjct: 77  IRMHREKAGSAAEVVGFVEQCSLSESIDVGDYQKAIEDLSSMQLSFEDVQMFLFKPKLNV 136

Query: 22  LLNLVGL 2
           LLNLVGL
Sbjct: 137 LLNLVGL 143


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