BLASTX nr result

ID: Panax21_contig00000725 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000725
         (1398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003627120.1| Coatomer subunit zeta-1, partial [Medicago t...    80   1e-12
ref|NP_001236887.1| nonclathrin coat protein zeta1-COP [Glycine ...    80   1e-12
ref|XP_003627135.1| Coatomer subunit zeta-1 [Medicago truncatula...    79   3e-12
emb|CAI29266.1| coatomer zeta1 subunit [Medicago truncatula] gi|...    78   6e-12
ref|XP_003542071.1| PREDICTED: coatomer subunit zeta-3-like [Gly...    77   1e-11

>ref|XP_003627120.1| Coatomer subunit zeta-1, partial [Medicago truncatula]
           gi|355521142|gb|AET01596.1| Coatomer subunit zeta-1,
           partial [Medicago truncatula]
          Length = 156

 Score = 80.5 bits (197), Expect = 1e-12
 Identities = 43/67 (64%), Positives = 50/67 (74%), Gaps = 3/67 (4%)
 Frame = -3

Query: 430 PSIKNILLLDFERKRVAVKYYSYDWLTNNIKLDFEKFLFTKTQKMNARIEG---ILLDVN 260
           PSIKNILLLD E KRVAVKYYS DW TN+ KL FEKF+FTKT K NAR EG   IL + +
Sbjct: 72  PSIKNILLLDSEGKRVAVKYYSDDWPTNSSKLAFEKFVFTKTVKTNARTEGKQQILRNTH 131

Query: 259 HNTLDVH 239
           H+   ++
Sbjct: 132 HDMKSIN 138


>ref|NP_001236887.1| nonclathrin coat protein zeta1-COP [Glycine max]
           gi|356526001|ref|XP_003531608.1| PREDICTED: coatomer
           subunit zeta-1-like [Glycine max]
           gi|7259348|dbj|BAA92779.1| nonclathrin coat protein
           zeta1-COP [Glycine max] gi|255626379|gb|ACU13534.1|
           unknown [Glycine max]
          Length = 180

 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 43/72 (59%), Positives = 50/72 (69%), Gaps = 6/72 (8%)
 Frame = -3

Query: 430 PSIKNILLLDFERKRVAVKYYSYDWLTNNIKLDFEKFLFTKTQKMNARIEGILLDVNHNT 251
           PSIKNILLLD E KRVAVKYYS DW TNN KL FEKF+FTKT K NAR E  +  + +N 
Sbjct: 8   PSIKNILLLDSEGKRVAVKYYSDDWPTNNAKLAFEKFVFTKTVKTNARTEAEVTLLENNI 67

Query: 250 L------DVHLY 233
           +      D+H +
Sbjct: 68  IIYKFVQDLHFF 79


>ref|XP_003627135.1| Coatomer subunit zeta-1 [Medicago truncatula]
           gi|355521157|gb|AET01611.1| Coatomer subunit zeta-1
           [Medicago truncatula]
          Length = 92

 Score = 79.0 bits (193), Expect = 3e-12
 Identities = 42/67 (62%), Positives = 50/67 (74%), Gaps = 3/67 (4%)
 Frame = -3

Query: 430 PSIKNILLLDFERKRVAVKYYSYDWLTNNIKLDFEKFLFTKTQKMNARIEG---ILLDVN 260
           PSIKNILLLD E KRVAVKYYS DW TN+ KL FEKF+FT+T K NAR EG   IL + +
Sbjct: 9   PSIKNILLLDSEGKRVAVKYYSDDWPTNSSKLAFEKFVFTETVKTNARTEGKQQILRNTH 68

Query: 259 HNTLDVH 239
           H+   ++
Sbjct: 69  HDMKSIN 75


>emb|CAI29266.1| coatomer zeta1 subunit [Medicago truncatula]
           gi|388493944|gb|AFK35038.1| unknown [Medicago
           truncatula] gi|388496304|gb|AFK36218.1| unknown
           [Medicago truncatula]
          Length = 180

 Score = 77.8 bits (190), Expect = 6e-12
 Identities = 42/72 (58%), Positives = 50/72 (69%), Gaps = 6/72 (8%)
 Frame = -3

Query: 430 PSIKNILLLDFERKRVAVKYYSYDWLTNNIKLDFEKFLFTKTQKMNARIEGILLDVNHNT 251
           PSIKNILLLD E KRVAVKYYS DW TN+ KL FEKF+FTKT K NAR E  +  + +N 
Sbjct: 8   PSIKNILLLDSEGKRVAVKYYSDDWPTNSSKLAFEKFVFTKTVKTNARTEAEITLLENNI 67

Query: 250 L------DVHLY 233
           +      D+H +
Sbjct: 68  VVYKFVQDLHFF 79


>ref|XP_003542071.1| PREDICTED: coatomer subunit zeta-3-like [Glycine max]
          Length = 181

 Score = 76.6 bits (187), Expect = 1e-11
 Identities = 40/72 (55%), Positives = 51/72 (70%), Gaps = 6/72 (8%)
 Frame = -3

Query: 430 PSIKNILLLDFERKRVAVKYYSYDWLTNNIKLDFEKFLFTKTQKMNARIEGILLDVNHNT 251
           PSIKNILLLD E KRVAVKY+S DW TNN K+ FEKF+F+KT K NAR E  +  +++N 
Sbjct: 8   PSIKNILLLDSEGKRVAVKYFSDDWPTNNSKIAFEKFVFSKTVKTNARTEAEITLLDNNI 67

Query: 250 L------DVHLY 233
           +      D+H +
Sbjct: 68  IIYKFVQDLHFF 79


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