BLASTX nr result

ID: Panax21_contig00000722 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000722
         (1528 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE74631.1| unknown [Vitis vinifera]                               416   e-113
ref|XP_002279202.2| PREDICTED: zinc finger CCCH domain-containin...   412   e-112
ref|XP_003533897.1| PREDICTED: zinc finger CCCH domain-containin...   394   e-107
ref|XP_003546887.1| PREDICTED: zinc finger CCCH domain-containin...   377   e-102
ref|XP_003542851.1| PREDICTED: zinc finger CCCH domain-containin...   377   e-102

>gb|ADE74631.1| unknown [Vitis vinifera]
          Length = 740

 Score =  416 bits (1068), Expect = e-113
 Identities = 232/339 (68%), Positives = 261/339 (76%), Gaps = 12/339 (3%)
 Frame = -2

Query: 1527 SPSAFNQTMSPSANGVNGVSHSSMAWAQPNVPTLHLPGXXXXXXXXXXXXXXRDIPQEXX 1348
            SPS F Q MSPSANG+   SHSS AW QPNVPTL+LPG              RDIP E  
Sbjct: 410  SPSPFAQPMSPSANGI---SHSSGAWPQPNVPTLNLPGSNFQSSRLRSSLNARDIPPEDF 466

Query: 1347 XXXXXXXXXXXXXXXLACFSQYRPNSVSLNRSGRSKTLTPSNLEELFSAELASSPRYSDQ 1168
                           L+CFSQ R N+ SL+RS RSKTLTPSNLEELFSAE++SSPRYSD 
Sbjct: 467  NMLLDFDAQQQLLNDLSCFSQPRTNAASLSRSARSKTLTPSNLEELFSAEISSSPRYSDS 526

Query: 1167 AAASGAFSPSHRSAVLNQFQQQQNT-LSPINTNLFSPKNVDH-LLQASFAVSSPGIMSPR 994
            +A    FSPSH+SA+LNQFQQQQ + LSPINTN+FSPKNV+H LLQASF +SSPG MSPR
Sbjct: 527  SAV---FSPSHKSAILNQFQQQQQSMLSPINTNVFSPKNVEHPLLQASFGISSPGRMSPR 583

Query: 993  SVEPISPMGSRLSAFAQRDLQHQQLHSLSSRDLGANN-SSIVGSPVNSSWSKWGSPNGKV 817
            S+EPISPMG RLSA AQR+ QHQQL SLSSRDLG+NN +S+VGSPVNS WSKWGSP GK+
Sbjct: 584  SMEPISPMGPRLSAIAQREKQHQQLRSLSSRDLGSNNPASVVGSPVNS-WSKWGSPTGKL 642

Query: 816  DWSVNGDELGWLRRSSSFELNKNGEEPDLSWVQSLVKESPPE-MKDKLPAPVTTSAAPSG 640
            DWSVNGDE+G L+RSSSFEL  NGEEPDLSWVQSLVKESPPE MK+KL APV+ SA+ SG
Sbjct: 643  DWSVNGDEMGRLKRSSSFELGNNGEEPDLSWVQSLVKESPPEMMKEKLAAPVSASAS-SG 701

Query: 639  EGLKTNSQVK--------PVDHSVLGAWLEQMQLDQLVV 547
            EGL +NSQ++         VDHSV+GAWLEQMQLDQLVV
Sbjct: 702  EGLNSNSQIESNSNSQIDSVDHSVIGAWLEQMQLDQLVV 740


>ref|XP_002279202.2| PREDICTED: zinc finger CCCH domain-containing protein 30 [Vitis
            vinifera]
          Length = 740

 Score =  412 bits (1059), Expect = e-112
 Identities = 230/339 (67%), Positives = 259/339 (76%), Gaps = 12/339 (3%)
 Frame = -2

Query: 1527 SPSAFNQTMSPSANGVNGVSHSSMAWAQPNVPTLHLPGXXXXXXXXXXXXXXRDIPQEXX 1348
            SPS F Q MSPSANG+   SHSS AW QPNVPTL+LPG              RDIP E  
Sbjct: 410  SPSPFAQPMSPSANGI---SHSSGAWPQPNVPTLNLPGSNFQSSRLRSSLNARDIPPEDF 466

Query: 1347 XXXXXXXXXXXXXXXLACFSQYRPNSVSLNRSGRSKTLTPSNLEELFSAELASSPRYSDQ 1168
                           L+CFSQ R N+ SL+RS RSKTLTPSNLEELFSAE++SSPRYSD 
Sbjct: 467  NMLLDFDAQQQLLNDLSCFSQPRTNAASLSRSARSKTLTPSNLEELFSAEISSSPRYSDS 526

Query: 1167 AAASGAFSPSHRSAVLNQFQQQQNT-LSPINTNLFSPKNVDH-LLQASFAVSSPGIMSPR 994
            +A    FSPSH+SA+LNQFQQQQ + LSPINTN+FSPKNV+H LLQASF +SSPG MSPR
Sbjct: 527  SAV---FSPSHKSAILNQFQQQQQSMLSPINTNVFSPKNVEHPLLQASFGISSPGRMSPR 583

Query: 993  SVEPISPMGSRLSAFAQRDLQHQQLHSLSSRDLGANN-SSIVGSPVNSSWSKWGSPNGKV 817
            S+EPISPMG RLSA AQR+ QHQQL SLSSRDLG+NN +S+VGSPVNS WSKWGSP GK+
Sbjct: 584  SMEPISPMGPRLSAIAQREKQHQQLRSLSSRDLGSNNPASVVGSPVNS-WSKWGSPTGKL 642

Query: 816  DWSVNGDELGWLRRSSSFELNKNGEEPDLSWVQSLVKESPPE-MKDKLPAPVTTSAAPSG 640
            DWSVNGDE+G L+RSSSFEL  NGEEPDLSWV SLVKESPPE MK+K  APV+ SA+ SG
Sbjct: 643  DWSVNGDEMGRLKRSSSFELGNNGEEPDLSWVHSLVKESPPEMMKEKFAAPVSASAS-SG 701

Query: 639  EGLKTNSQVK--------PVDHSVLGAWLEQMQLDQLVV 547
            EGL +NSQ++         VDHSV+GAWLEQMQLDQLVV
Sbjct: 702  EGLNSNSQIESNSNSQIDSVDHSVIGAWLEQMQLDQLVV 740


>ref|XP_003533897.1| PREDICTED: zinc finger CCCH domain-containing protein 30-like
            [Glycine max]
          Length = 701

 Score =  394 bits (1012), Expect = e-107
 Identities = 220/333 (66%), Positives = 250/333 (75%), Gaps = 6/333 (1%)
 Frame = -2

Query: 1527 SPSAFNQTMSPSANGVNGVSHSSMAWAQPNVPTLHLPGXXXXXXXXXXXXXXRDIPQEXX 1348
            SPS F Q MSPS +G+   SHSS AW QPNVP LHLPG              RD+P E  
Sbjct: 375  SPSPFAQPMSPSTSGI---SHSSNAWPQPNVPALHLPGSNIQTSRLRSSLSARDMPPEDF 431

Query: 1347 XXXXXXXXXXXXXXXLACFSQYRPNSVSLNRSGRSKTLTPSNLEELFSAELASSPRYSDQ 1168
                           L CFSQ RP ++S++RSGRSKTLTPSNL+ELFSAE++SSPRYSD 
Sbjct: 432  DVLQDFDGQQHLLSDLGCFSQPRPGAISVSRSGRSKTLTPSNLDELFSAEISSSPRYSDP 491

Query: 1167 AAASGAFSPSHRSAVLNQFQQQQNTLSPINTNLFSPKNVDH-LLQASFAVSSPGIMSPRS 991
            A AS  FSP H+S ++NQFQQ Q++LSPINT++ SP+NV+H LLQASF VSSPG MSPRS
Sbjct: 492  AVAS-VFSPRHKSTIMNQFQQLQSSLSPINTSVSSPRNVEHPLLQASFGVSSPGRMSPRS 550

Query: 990  VEPISPMGSRLSAFAQRDLQHQQLHSLSSRDLGAN-NSSIVGSPVNSSWSKWGSP--NGK 820
            +EPISPM SRLSAFAQR+ QHQQL SLSSRDLGAN  +S+VGSPVNS WS WGSP  NGK
Sbjct: 551  MEPISPMSSRLSAFAQREKQHQQLRSLSSRDLGANVPASMVGSPVNS-WSNWGSPHGNGK 609

Query: 819  VDWSVNGDELGWLRRSSSFELNKNGEEPDLSWVQSLVKESPPEMKDKL--PAPVTTSAAP 646
            VDWSVNG+ELG L+RSSSFEL  NGEEPDLSWVQSLVKESP E+K+KL    PV +   P
Sbjct: 610  VDWSVNGNELGRLQRSSSFELGNNGEEPDLSWVQSLVKESPSEIKEKLTGSGPVASVDGP 669

Query: 645  SGEGLKTNSQVKPVDHSVLGAWLEQMQLDQLVV 547
            S    K+N QV+ VDHSVLGAWLEQMQLDQLVV
Sbjct: 670  SSNP-KSNPQVESVDHSVLGAWLEQMQLDQLVV 701


>ref|XP_003546887.1| PREDICTED: zinc finger CCCH domain-containing protein 30-like
            [Glycine max]
          Length = 683

 Score =  377 bits (969), Expect = e-102
 Identities = 215/332 (64%), Positives = 243/332 (73%), Gaps = 5/332 (1%)
 Frame = -2

Query: 1527 SPSAFNQTMSPSANGVNGVSHSSMAWAQPNVPTLHLPGXXXXXXXXXXXXXXRDIPQEXX 1348
            SPS F Q MSPS +G+   SHSS AW QPNVP LHLPG              RD+P E  
Sbjct: 363  SPSPFAQPMSPSTSGI---SHSSNAWPQPNVPALHLPGSNIQTSRLRSSLSARDMPPEDL 419

Query: 1347 XXXXXXXXXXXXXXXLACFSQYRPNSVSLNRSGRSKTLTPSNLEELFSAELASSPRYSDQ 1168
                           L CFSQ  P  +S++RSGRSKTLTPSNL+ELFSAE++SSPRYSD 
Sbjct: 420  DVLQDFDGQQHLLNDLGCFSQPHPGGISVSRSGRSKTLTPSNLDELFSAEISSSPRYSDP 479

Query: 1167 AAASGAFSPSHRSAVLNQFQQQQNTLSPINTNLFSPKNVDH-LLQASFAVSSPGIMSPRS 991
            A AS  FSP+H+SA++NQFQQ Q++LSPINT++ SP+NV+H L QASF VSSPG MSPRS
Sbjct: 480  AVAS-VFSPTHKSAIMNQFQQLQSSLSPINTSVLSPRNVEHPLFQASFGVSSPGRMSPRS 538

Query: 990  VEPISPMGSRLSAFAQRDLQHQQLHSLSSRDLGANNS-SIVGSPVNSSWSKWGSP--NGK 820
            +EPISPM SRLS FAQR+ QHQQL SLSSRDLGAN   S+VGSPVNS WS WGSP  NGK
Sbjct: 539  MEPISPMSSRLS-FAQREKQHQQLRSLSSRDLGANIPVSMVGSPVNS-WSNWGSPHGNGK 596

Query: 819  VDWSVNGDELGWLRRSSSFELNKNGEEPDLSWVQSLVKESPPEMKD-KLPAPVTTSAAPS 643
            VDWSVNG+ELG L RSSSFEL  NGEEPDLSWVQSLVKESP E+K+     PV  +  PS
Sbjct: 597  VDWSVNGNELGRLHRSSSFELGNNGEEPDLSWVQSLVKESPSEIKELGGSGPVAFADGPS 656

Query: 642  GEGLKTNSQVKPVDHSVLGAWLEQMQLDQLVV 547
                 +N QV+ VDHSVLGAWLEQMQLDQLVV
Sbjct: 657  -----SNPQVESVDHSVLGAWLEQMQLDQLVV 683


>ref|XP_003542851.1| PREDICTED: zinc finger CCCH domain-containing protein 30-like isoform
            1 [Glycine max] gi|356548931|ref|XP_003542852.1|
            PREDICTED: zinc finger CCCH domain-containing protein
            30-like isoform 2 [Glycine max]
          Length = 701

 Score =  377 bits (969), Expect = e-102
 Identities = 214/332 (64%), Positives = 243/332 (73%), Gaps = 5/332 (1%)
 Frame = -2

Query: 1527 SPSAFNQTMSPSANGVNGVSHSSMAWAQPNVPTLHLPGXXXXXXXXXXXXXXRDIPQEXX 1348
            SPS F Q MSPSANG+      S AWAQPNVP LHLPG              RDIP E  
Sbjct: 379  SPSHFGQPMSPSANGMP----LSSAWAQPNVPALHLPGSNLQSSRLRSSLSARDIPPEDL 434

Query: 1347 XXXXXXXXXXXXXXXL-ACFSQYRPNSVSLNRSGRSKTLTPSNLEELFSAELASSPRYSD 1171
                             +C+ Q RP + S++RSGRSKTLTPSNLEELFSAE++ SPRYSD
Sbjct: 435  NMMSDLDGQQQHHLNDLSCYIQPRPGASSVSRSGRSKTLTPSNLEELFSAEISLSPRYSD 494

Query: 1170 QAAASGAFSPSHRSAVLNQFQQQQNTLSPINTNLFSPKNVDH-LLQASFAVSSPGIMSPR 994
             AA S  FSP+H+SAVLNQFQQ Q+ LSPINTNL SPKNV+H L QASF VS  G MSPR
Sbjct: 495  PAAGS-VFSPTHKSAVLNQFQQLQSMLSPINTNLLSPKNVEHPLFQASFGVSPSGRMSPR 553

Query: 993  SVEPISPMGSRLSAFAQRDLQHQQLHSLSSRDLGANN-SSIVGSPVNSSWSKWGSPNGKV 817
            SVEPISPM +RLSAFAQR+ Q QQL S+SSRDLGAN+ +S+VGSP N  WSKWGSP GK 
Sbjct: 554  SVEPISPMSARLSAFAQREKQQQQLRSVSSRDLGANSPASLVGSPANP-WSKWGSPIGKA 612

Query: 816  DWSVNGDELG-WLRRSSSFELNKNGEEPDLSWVQSLVKESPPEM-KDKLPAPVTTSAAPS 643
            DWSVNGD LG  +RRSSSFE   NGEEPDLSWVQSLVKESPPEM K+K  +P+ T++A  
Sbjct: 613  DWSVNGDSLGRQMRRSSSFERKNNGEEPDLSWVQSLVKESPPEMIKEKFASPMPTASA-- 670

Query: 642  GEGLKTNSQVKPVDHSVLGAWLEQMQLDQLVV 547
             +G  +NSQ++ +DHSVLGAWLEQMQLDQLVV
Sbjct: 671  -DGPNSNSQIESIDHSVLGAWLEQMQLDQLVV 701


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