BLASTX nr result

ID: Panax21_contig00000709 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000709
         (1009 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003617143.1| Oligoribonuclease [Medicago truncatula] gi|3...    79   2e-12
ref|XP_003592705.1| HAT family dimerization domain containing pr...    53   2e-10
ref|NP_001068267.2| Os11g0613900 [Oryza sativa Japonica Group] g...    71   4e-10
gb|EEE52457.1| hypothetical protein OsJ_34617 [Oryza sativa Japo...    71   4e-10
ref|XP_003622239.1| HAT family dimerization domain containing pr...    71   5e-10

>ref|XP_003617143.1| Oligoribonuclease [Medicago truncatula] gi|355518478|gb|AET00102.1|
            Oligoribonuclease [Medicago truncatula]
          Length = 1551

 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 51/122 (41%), Positives = 75/122 (61%), Gaps = 7/122 (5%)
 Frame = +1

Query: 508  RAKIWVH*TRFKQNGQIKAKCKYC-GTILSADPKNNGTSGLNAH-NSRCKIYPPNVE*R- 678
            R K WV     K+ G  +A CK+C     +AD  N+GTS L+ H   +CK +P +++   
Sbjct: 955  RPKSWVWDHFIKEKG--RAMCKWCKNASYAADSHNSGTSNLSTHLRKQCKKFPKHLDPNY 1012

Query: 679  --NKAILNFKFETMEGESTNNCLWK--FDVELTRAALA*MILVDELPFKFVENEGFR*IV 846
              N+ IL+   +  +G S+N+ +    FDV+++R ALA MI+VDELPF FVENEGFR  +
Sbjct: 1013 DPNQTILSL--QDSKGTSSNSTIVAVHFDVDVSRQALARMIIVDELPFSFVENEGFRYFM 1070

Query: 847  SI 852
            S+
Sbjct: 1071 SV 1072



 Score = 60.8 bits (146), Expect = 5e-07
 Identities = 24/40 (60%), Positives = 32/40 (80%)
 Frame = +2

Query: 887  SMHRLNYMVVTAHYIDDKWRLRKKIINFVPILSHKGEAIG 1006
            S+  +NYMV+TAH+ID  W++ K+I+NF PI SHKGE IG
Sbjct: 1120 SVQNINYMVLTAHFIDQDWKMHKRILNFCPITSHKGEVIG 1159


>ref|XP_003592705.1| HAT family dimerization domain containing protein [Medicago
            truncatula] gi|358345320|ref|XP_003636729.1| HAT family
            dimerization domain containing protein [Medicago
            truncatula] gi|355481753|gb|AES62956.1| HAT family
            dimerization domain containing protein [Medicago
            truncatula] gi|355502664|gb|AES83867.1| HAT family
            dimerization domain containing protein [Medicago
            truncatula]
          Length = 576

 Score = 53.1 bits (126), Expect(2) = 2e-10
 Identities = 23/41 (56%), Positives = 31/41 (75%)
 Frame = +2

Query: 887  SMHRLNYMVVTAHYIDDKWRLRKKIINFVPILSHKGEAIGM 1009
            S+  +NYM VTAHYI D+W L+KKI++F  I  HKG+ IG+
Sbjct: 162  SIQNMNYMCVTAHYIRDEWVLKKKILSFNLIADHKGKTIGI 202



 Score = 38.9 bits (89), Expect(2) = 2e-10
 Identities = 17/25 (68%), Positives = 21/25 (84%)
 Frame = +1

Query: 763 TRAALA*MILVDELPFKFVENEGFR 837
           TR ALA MI+++ELPFK  ENEGF+
Sbjct: 102 TRLALAKMIIIEELPFKHAENEGFK 126


>ref|NP_001068267.2| Os11g0613900 [Oryza sativa Japonica Group]
           gi|77552015|gb|ABA94812.1| hAT family dimerisation
           domain containing protein [Oryza sativa Japonica Group]
           gi|255680263|dbj|BAF28630.2| Os11g0613900 [Oryza sativa
           Japonica Group]
          Length = 709

 Score = 71.2 bits (173), Expect = 4e-10
 Identities = 43/112 (38%), Positives = 55/112 (49%), Gaps = 2/112 (1%)
 Frame = +1

Query: 508 RAKIWVH*TRFK-QNGQIKAKCKYCGTILSADPKNNGTSGLNAHNSRCKIYPPNVE*RNK 684
           R+ +W   ++ K  NG+ +AKCKYC  +   DP+ NGTS L  H   CK  P      N+
Sbjct: 50  RSDVWGSFSKVKISNGEERAKCKYCQKLFRCDPRTNGTSSLKNHLKICKKNPNKPVIDNQ 109

Query: 685 AILNFKFETMEGESTNNC-LWKFDVELTRAALA*MILVDELPFKFVENEGFR 837
             L        G S   C  WKFD+E  R + A MI+ DE PF   E  G R
Sbjct: 110 RTLQIT-PGSGGSSVGTCSTWKFDIEDLRNSFAEMIIEDEQPFVLSERPGLR 160


>gb|EEE52457.1| hypothetical protein OsJ_34617 [Oryza sativa Japonica Group]
          Length = 697

 Score = 71.2 bits (173), Expect = 4e-10
 Identities = 43/112 (38%), Positives = 55/112 (49%), Gaps = 2/112 (1%)
 Frame = +1

Query: 508 RAKIWVH*TRFK-QNGQIKAKCKYCGTILSADPKNNGTSGLNAHNSRCKIYPPNVE*RNK 684
           R+ +W   ++ K  NG+ +AKCKYC  +   DP+ NGTS L  H   CK  P      N+
Sbjct: 50  RSDVWGSFSKVKISNGEERAKCKYCQKLFRCDPRTNGTSSLKNHLKICKKNPNKPVIDNQ 109

Query: 685 AILNFKFETMEGESTNNC-LWKFDVELTRAALA*MILVDELPFKFVENEGFR 837
             L        G S   C  WKFD+E  R + A MI+ DE PF   E  G R
Sbjct: 110 RTLQIT-PGSGGSSVGTCSTWKFDIEDLRNSFAEMIIEDEQPFVLSERPGLR 160


>ref|XP_003622239.1| HAT family dimerization domain containing protein [Medicago
           truncatula] gi|355497254|gb|AES78457.1| HAT family
           dimerization domain containing protein [Medicago
           truncatula]
          Length = 255

 Score = 70.9 bits (172), Expect = 5e-10
 Identities = 45/116 (38%), Positives = 69/116 (59%), Gaps = 3/116 (2%)
 Frame = +1

Query: 517 IWVH*TRFKQNGQIKAKCKYCGTI-LSADPKNNGTSGLNAH-NSRCKIYPPNVE*RNKAI 690
           +W H T  K+NG  +A+CK+C  +  +AD   +GT+ L  H   +CK +P ++   N+  
Sbjct: 9   VWEHFT--KENG--RAECKWCENVSYAADSHKDGTTNLATHLQKQCKKFPKHLN-PNQTT 63

Query: 691 LNFKFETMEGESTNNCLW-KFDVELTRAALA*MILVDELPFKFVENEGFR*IVSIA 855
           LN +       S+N  +   FDV++   ALA  I++DELPF FVENEGFR  +S++
Sbjct: 64  LNHQDSKGTSSSSNTIVAVHFDVDVCSQALARTIILDELPFSFVENEGFRYFMSVS 119


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