BLASTX nr result

ID: Panax21_contig00000678 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000678
         (725 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17513.3| unnamed protein product [Vitis vinifera]              306   2e-81
ref|XP_002266705.1| PREDICTED: nucleolar protein 6-like [Vitis v...   306   2e-81
ref|XP_004142478.1| PREDICTED: nucleolar protein 6-like [Cucumis...   287   1e-75
ref|XP_003612000.1| Nucleolar protein [Medicago truncatula] gi|3...   281   1e-73
ref|XP_003516574.1| PREDICTED: nucleolar protein 6-like [Glycine...   280   2e-73

>emb|CBI17513.3| unnamed protein product [Vitis vinifera]
          Length = 1066

 Score =  306 bits (785), Expect = 2e-81
 Identities = 150/242 (61%), Positives = 191/242 (78%), Gaps = 3/242 (1%)
 Frame = -1

Query: 725  TSVDFPAKFDHCIRLNLKGNAKVYASGFCSDDECWRYYELKLHSLMQEALGKKVKFVRVI 546
            T +D+PAK+D+C+RLNLKGN+ VYA GFC D+ECWR +E K+H L+ + L  + KF+RV 
Sbjct: 384  TKIDYPAKYDYCMRLNLKGNSDVYALGFCLDEECWRSFEQKVHFLLCQGLSDRAKFIRVS 443

Query: 545  WRNTVSECNVEDGLSMFDREALIIGISLNS-EEVFKKVIKGPSSENKDEATKFKTFWGEK 369
            W+N  SECNVE+GLS+FDRE L+IGIS++S E+ F+ V  GP++E+KDEA KF+ FWGEK
Sbjct: 444  WKNATSECNVENGLSIFDREPLLIGISVSSLEKAFRVVDVGPNAEHKDEALKFRKFWGEK 503

Query: 368  AELRNI-DGII-ECAVWDCDPWESHLIIKWITEHILVRHLSLSKEKIMHVVDQLDFSLAL 195
            AELR   DG+I E  VW+   WE H IIK ITE++L+RHLSLS+  I+H+VDQLDFSL  
Sbjct: 504  AELRRFKDGMIAESTVWESKQWERHTIIKRITEYLLLRHLSLSERNIVHIVDQLDFSLVN 563

Query: 194  GRGDPTSFAGHLLKAFNDLSKCLRFLSDIPLRISSVQPLDSAFRCTSVCPPQPHPLASEE 15
            G GD  SF+G LL+AF  LSK L  L DIPL++SSVQPLDSAFR TSV PP+PHPLA+E+
Sbjct: 564  GVGDSISFSGSLLEAFEVLSKRLHLLKDIPLKVSSVQPLDSAFRFTSVFPPEPHPLANEK 623

Query: 14   SS 9
            S+
Sbjct: 624  SA 625


>ref|XP_002266705.1| PREDICTED: nucleolar protein 6-like [Vitis vinifera]
          Length = 1057

 Score =  306 bits (785), Expect = 2e-81
 Identities = 150/242 (61%), Positives = 191/242 (78%), Gaps = 3/242 (1%)
 Frame = -1

Query: 725  TSVDFPAKFDHCIRLNLKGNAKVYASGFCSDDECWRYYELKLHSLMQEALGKKVKFVRVI 546
            T +D+PAK+D+C+RLNLKGN+ VYA GFC D+ECWR +E K+H L+ + L  + KF+RV 
Sbjct: 381  TKIDYPAKYDYCMRLNLKGNSDVYALGFCLDEECWRSFEQKVHFLLCQGLSDRAKFIRVS 440

Query: 545  WRNTVSECNVEDGLSMFDREALIIGISLNS-EEVFKKVIKGPSSENKDEATKFKTFWGEK 369
            W+N  SECNVE+GLS+FDRE L+IGIS++S E+ F+ V  GP++E+KDEA KF+ FWGEK
Sbjct: 441  WKNATSECNVENGLSIFDREPLLIGISVSSLEKAFRVVDVGPNAEHKDEALKFRKFWGEK 500

Query: 368  AELRNI-DGII-ECAVWDCDPWESHLIIKWITEHILVRHLSLSKEKIMHVVDQLDFSLAL 195
            AELR   DG+I E  VW+   WE H IIK ITE++L+RHLSLS+  I+H+VDQLDFSL  
Sbjct: 501  AELRRFKDGMIAESTVWESKQWERHTIIKRITEYLLLRHLSLSERNIVHIVDQLDFSLVN 560

Query: 194  GRGDPTSFAGHLLKAFNDLSKCLRFLSDIPLRISSVQPLDSAFRCTSVCPPQPHPLASEE 15
            G GD  SF+G LL+AF  LSK L  L DIPL++SSVQPLDSAFR TSV PP+PHPLA+E+
Sbjct: 561  GVGDSISFSGSLLEAFEVLSKRLHLLKDIPLKVSSVQPLDSAFRFTSVFPPEPHPLANEK 620

Query: 14   SS 9
            S+
Sbjct: 621  SA 622


>ref|XP_004142478.1| PREDICTED: nucleolar protein 6-like [Cucumis sativus]
          Length = 1070

 Score =  287 bits (735), Expect = 1e-75
 Identities = 139/245 (56%), Positives = 184/245 (75%), Gaps = 4/245 (1%)
 Frame = -1

Query: 725  TSVDFPAKFDHCIRLNLKGNAKVYASGFCSDDECWRYYELKLHSLMQEALGKKVKFVRVI 546
            T +DF  K+DHCIRLNL+G  K+YASGFC DDECWR YE K+H ++ + L  + KF+RV 
Sbjct: 391  TKIDFAVKYDHCIRLNLRGQDKLYASGFCMDDECWRLYEQKIHGVLSQGLTDRAKFIRVS 450

Query: 545  WRNTVSECNVEDGLSMFDREALIIGISLNS-EEVFKKVIKGPSSENKDEATKFKTFWGEK 369
            WRNT   CN+E+GLS FD + L++GIS++S E+ F+ V  GP++++K++A KF+ FWGEK
Sbjct: 451  WRNTEPGCNIENGLSAFDMQPLLVGISISSVEKAFRVVDIGPNADDKEDALKFRRFWGEK 510

Query: 368  AELRNI-DG-IIECAVWDCDPWESHLIIKWITEHILVRHLS-LSKEKIMHVVDQLDFSLA 198
            AELR   DG I E  VW+ D W  HLI+K I E++ VRHLS +S  +IMH VDQ+DFSL 
Sbjct: 511  AELRRFKDGRIAESTVWETDQWTRHLILKRIVEYLFVRHLSPMSTNRIMHAVDQIDFSLL 570

Query: 197  LGRGDPTSFAGHLLKAFNDLSKCLRFLSDIPLRISSVQPLDSAFRCTSVCPPQPHPLASE 18
             G  DP +F+G LL+++  LSK LR + DIPL++S+VQPLDSAFR TSV PP+PHPLA E
Sbjct: 571  HGSRDPITFSGTLLESYEVLSKRLRSIEDIPLKVSAVQPLDSAFRYTSVYPPEPHPLAEE 630

Query: 17   ESSYR 3
            ++S R
Sbjct: 631  KASDR 635


>ref|XP_003612000.1| Nucleolar protein [Medicago truncatula] gi|355513335|gb|AES94958.1|
            Nucleolar protein [Medicago truncatula]
          Length = 1048

 Score =  281 bits (718), Expect = 1e-73
 Identities = 134/240 (55%), Positives = 181/240 (75%), Gaps = 3/240 (1%)
 Frame = -1

Query: 725  TSVDFPAKFDHCIRLNLKGNAKVYASGFCSDDECWRYYELKLHSLMQEALGKKVKFVRVI 546
            T +D+  K+D+C+R+N KGN ++YASGFC DDECWR YE K+H+++ + L  + KF+RVI
Sbjct: 371  TKIDYAVKYDYCMRINFKGNKELYASGFCMDDECWRLYEEKIHAILAKGLNDRAKFIRVI 430

Query: 545  WRNTVSECNVEDGLSMFDREALIIGISLNS-EEVFKKVIKGPSSENKDEATKFKTFWGEK 369
            WRN   + +V DGLS+ D+E L IGIS++  E+ F+ V  GP++E+K++A +F+ FWGEK
Sbjct: 431  WRNAQCQWSVNDGLSILDKEPLFIGISVSDLEKAFRMVDIGPNAESKEQALEFRKFWGEK 490

Query: 368  AELRNIDG--IIECAVWDCDPWESHLIIKWITEHILVRHLSLSKEKIMHVVDQLDFSLAL 195
            +ELR      I E  VW+C  WE HLI+K I EH+L RHLSLSKE I+ VVDQLDFSLA 
Sbjct: 491  SELRRFKDSRIAESTVWECQKWERHLILKNIAEHVLSRHLSLSKENIVVVVDQLDFSLAH 550

Query: 194  GRGDPTSFAGHLLKAFNDLSKCLRFLSDIPLRISSVQPLDSAFRCTSVCPPQPHPLASEE 15
            G  DP + +G+LL+AF+ LSK LR +  +PL++SSVQPLDSAFR TSV PP+PH LA+E+
Sbjct: 551  GAVDPIAHSGNLLEAFDLLSKRLRLIEGLPLKVSSVQPLDSAFRFTSVFPPEPHLLANEK 610


>ref|XP_003516574.1| PREDICTED: nucleolar protein 6-like [Glycine max]
          Length = 1055

 Score =  280 bits (717), Expect = 2e-73
 Identities = 136/240 (56%), Positives = 183/240 (76%), Gaps = 3/240 (1%)
 Frame = -1

Query: 725  TSVDFPAKFDHCIRLNLKGNAKVYASGFCSDDECWRYYELKLHSLMQEALGKKVKFVRVI 546
            T +D+  K+D+C+R+NLKG  +V+ASGFC DDECWR YE K+H ++ + L  + KF++V 
Sbjct: 377  TKIDYAGKYDYCMRINLKGKKEVFASGFCLDDECWRSYEDKIHGILSKGLNDRAKFIQVT 436

Query: 545  WRNTVSECNVEDGLSMFDREALIIGISLNS-EEVFKKVIKGPSSENKDEATKFKTFWGEK 369
            WRNT  + +V+DGLS+ D+  L IGIS+++ E+ F+ V  GP++E+K+EA +F+ FWGEK
Sbjct: 437  WRNTHCQWSVDDGLSVLDKVPLFIGISVSTLEKAFRMVDIGPNAESKEEALEFRKFWGEK 496

Query: 368  AELRNI-DG-IIECAVWDCDPWESHLIIKWITEHILVRHLSLSKEKIMHVVDQLDFSLAL 195
            AELR   DG I E  VW+ + W  HLI+K I EH+L RHLSLSKE I+ VVDQLDFSL  
Sbjct: 497  AELRRFKDGRIAESTVWEIEQWAKHLILKRIVEHVLSRHLSLSKENIVVVVDQLDFSLLH 556

Query: 194  GRGDPTSFAGHLLKAFNDLSKCLRFLSDIPLRISSVQPLDSAFRCTSVCPPQPHPLASEE 15
            G GDP S++G+LL AF+ LSK LR + D+PL++SSVQPLDSAFR TSV PP+PH LA+E+
Sbjct: 557  GSGDPISYSGNLLGAFDVLSKRLRLIEDLPLKVSSVQPLDSAFRFTSVFPPEPHHLANEK 616


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