BLASTX nr result

ID: Panax21_contig00000669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000669
         (910 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278318.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   527   e-147
ref|XP_002330044.1| predicted protein [Populus trichocarpa] gi|2...   520   e-145
ref|XP_003521635.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   518   e-145
ref|XP_003554590.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   516   e-144
ref|XP_002512602.1| dead box ATP-dependent RNA helicase, putativ...   516   e-144

>ref|XP_002278318.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic
            [Vitis vinifera] gi|296089875|emb|CBI39694.3| unnamed
            protein product [Vitis vinifera]
          Length = 764

 Score =  527 bits (1357), Expect = e-147
 Identities = 266/302 (88%), Positives = 290/302 (96%)
 Frame = -1

Query: 907  NSLKLGEVQFLVLDEADQMLAVGFEEDVEMILEKIPAERQSMLFSATMPGWVKKLSRKYL 728
            NSLKLGEVQ LVLDEADQMLAVGFEEDVE+ILEK+P+ERQSMLFSATMP WVKKL+RKYL
Sbjct: 260  NSLKLGEVQNLVLDEADQMLAVGFEEDVEVILEKLPSERQSMLFSATMPAWVKKLARKYL 319

Query: 727  NNPLTIDLVGDQDEKLAEGIKLYALSTTSSSKRSILGDLVTVYAKGGKTIVFTQTKRDAD 548
            +NPLTIDLVGD DEKLAEGIKLYA+ TT++SKR+IL DL+TVYAKGGKTIVFTQTKRDAD
Sbjct: 320  DNPLTIDLVGDHDEKLAEGIKLYAIPTTATSKRTILSDLITVYAKGGKTIVFTQTKRDAD 379

Query: 547  EVSMALTNSIASEALHGDISQHQRERTLNRFRQGKFTVLVATDVASRGLDIPNVDLIIHY 368
            EVSMALTNSIASEALHGDISQHQRERTLN FRQGKFTVLVATDVA+RGLDIPNVDLIIHY
Sbjct: 380  EVSMALTNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHY 439

Query: 367  ELPNDAETFVHRSGRTGRAGKEGSAILMFTNNQRRTISSLERDVGCKFDFISPPAVEEVL 188
            ELPND ETFVHRSGRTGRAGKEG+AILMFT++QRRT+ SLERDVGCKF+FISPPA+EEVL
Sbjct: 440  ELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVKSLERDVGCKFEFISPPAIEEVL 499

Query: 187  ESSAVQVVATLSGVHPESVEFFTPTAQKMIDERGTSALAAAIAQLSGFSRPPSSRSLISY 8
            ESSA QVVATL+GVHPESVEFFTPTAQK+I+E+GT ALAAA+A LSGFS+PPS RSLIS+
Sbjct: 500  ESSAEQVVATLNGVHPESVEFFTPTAQKLIEEKGTGALAAALAHLSGFSQPPSFRSLISH 559

Query: 7    EQ 2
            EQ
Sbjct: 560  EQ 561


>ref|XP_002330044.1| predicted protein [Populus trichocarpa] gi|222871469|gb|EEF08600.1|
            predicted protein [Populus trichocarpa]
          Length = 775

 Score =  520 bits (1340), Expect = e-145
 Identities = 261/302 (86%), Positives = 290/302 (96%)
 Frame = -1

Query: 907  NSLKLGEVQFLVLDEADQMLAVGFEEDVEMILEKIPAERQSMLFSATMPGWVKKLSRKYL 728
            NSLKLGEV++LVLDEADQML+ GFEEDVE+ILE +P++RQSMLFSATMP WVKKL+RKYL
Sbjct: 277  NSLKLGEVEYLVLDEADQMLSFGFEEDVEVILENLPSKRQSMLFSATMPTWVKKLARKYL 336

Query: 727  NNPLTIDLVGDQDEKLAEGIKLYALSTTSSSKRSILGDLVTVYAKGGKTIVFTQTKRDAD 548
            +NPL IDLVGDQ+EKLAEGIKLYALS T++SKR+IL DLVTVYAKGGKTI+FTQTKRDAD
Sbjct: 337  DNPLQIDLVGDQEEKLAEGIKLYALSATAASKRTILSDLVTVYAKGGKTIIFTQTKRDAD 396

Query: 547  EVSMALTNSIASEALHGDISQHQRERTLNRFRQGKFTVLVATDVASRGLDIPNVDLIIHY 368
            EVSMALTN+IASEALHGDISQHQRERTLN FRQGKFTVLVATDVASRGLDIPNVDLIIHY
Sbjct: 397  EVSMALTNTIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLIIHY 456

Query: 367  ELPNDAETFVHRSGRTGRAGKEGSAILMFTNNQRRTISSLERDVGCKFDFISPPAVEEVL 188
            ELPNDAETFVHRSGRTGRAGKEG+AILMFT++QRRT+ SLERD GCKF+F+SPPA+EEVL
Sbjct: 457  ELPNDAETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDAGCKFEFVSPPAIEEVL 516

Query: 187  ESSAVQVVATLSGVHPESVEFFTPTAQKMIDERGTSALAAAIAQLSGFSRPPSSRSLISY 8
            ESSA QVVATLSGVHPESVEFFTPTAQK+I+E+GT+ALAAA+A LSGFS+PPSSRSLIS+
Sbjct: 517  ESSAEQVVATLSGVHPESVEFFTPTAQKLIEEQGTNALAAALAHLSGFSQPPSSRSLISH 576

Query: 7    EQ 2
             Q
Sbjct: 577  AQ 578


>ref|XP_003521635.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            [Glycine max]
          Length = 771

 Score =  518 bits (1333), Expect = e-145
 Identities = 258/302 (85%), Positives = 290/302 (96%)
 Frame = -1

Query: 907  NSLKLGEVQFLVLDEADQMLAVGFEEDVEMILEKIPAERQSMLFSATMPGWVKKLSRKYL 728
            NSLKL EVQ+LVLDEADQMLAVGFEEDVEMILE +PA+RQSMLFSATMP WVKKL+RKYL
Sbjct: 254  NSLKLSEVQYLVLDEADQMLAVGFEEDVEMILENLPAQRQSMLFSATMPSWVKKLARKYL 313

Query: 727  NNPLTIDLVGDQDEKLAEGIKLYALSTTSSSKRSILGDLVTVYAKGGKTIVFTQTKRDAD 548
            NNPLTIDLVGD++EKLAEGIKLYA++ T++SKR+IL DLVTVYAKGGKTIVFTQTKRDAD
Sbjct: 314  NNPLTIDLVGDEEEKLAEGIKLYAIAATATSKRTILSDLVTVYAKGGKTIVFTQTKRDAD 373

Query: 547  EVSMALTNSIASEALHGDISQHQRERTLNRFRQGKFTVLVATDVASRGLDIPNVDLIIHY 368
            EVS++LTNSI SEALHGDISQHQRERTLN FRQGKFTVLVATDVA+RGLDIPNVDLIIHY
Sbjct: 374  EVSLSLTNSIMSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHY 433

Query: 367  ELPNDAETFVHRSGRTGRAGKEGSAILMFTNNQRRTISSLERDVGCKFDFISPPAVEEVL 188
            ELPND ETFVHRSGRTGRAGK+G+AIL++T++QRRT+ SLERDVGCKF+F+S PA+EEVL
Sbjct: 434  ELPNDPETFVHRSGRTGRAGKQGNAILLYTSSQRRTVRSLERDVGCKFEFVSAPAMEEVL 493

Query: 187  ESSAVQVVATLSGVHPESVEFFTPTAQKMIDERGTSALAAAIAQLSGFSRPPSSRSLISY 8
            ESSA QVVATL GVHPESV+FFTPTAQ++I+E+GTSALAAA+AQLSGFSRPPSSRSLI++
Sbjct: 494  ESSAEQVVATLGGVHPESVQFFTPTAQRLIEEQGTSALAAALAQLSGFSRPPSSRSLITH 553

Query: 7    EQ 2
            EQ
Sbjct: 554  EQ 555


>ref|XP_003554590.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            [Glycine max]
          Length = 771

 Score =  516 bits (1329), Expect = e-144
 Identities = 257/302 (85%), Positives = 290/302 (96%)
 Frame = -1

Query: 907  NSLKLGEVQFLVLDEADQMLAVGFEEDVEMILEKIPAERQSMLFSATMPGWVKKLSRKYL 728
            NSLKL EVQ+LVLDEADQMLAVGFEEDVEMILE +P++RQSMLFSATMP WVKKL+RKYL
Sbjct: 253  NSLKLSEVQYLVLDEADQMLAVGFEEDVEMILENLPSQRQSMLFSATMPSWVKKLARKYL 312

Query: 727  NNPLTIDLVGDQDEKLAEGIKLYALSTTSSSKRSILGDLVTVYAKGGKTIVFTQTKRDAD 548
            NNPLTIDLVGD++EKLAEGIKLYA++ T++SKR+IL DLVTVYAKGGKTIVFTQTKRDAD
Sbjct: 313  NNPLTIDLVGDEEEKLAEGIKLYAIAATATSKRTILSDLVTVYAKGGKTIVFTQTKRDAD 372

Query: 547  EVSMALTNSIASEALHGDISQHQRERTLNRFRQGKFTVLVATDVASRGLDIPNVDLIIHY 368
            EVS++LTNSI SEALHGDISQHQRERTLN FRQGKFTVLVATDVA+RGLDIPNVDLIIHY
Sbjct: 373  EVSLSLTNSIMSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHY 432

Query: 367  ELPNDAETFVHRSGRTGRAGKEGSAILMFTNNQRRTISSLERDVGCKFDFISPPAVEEVL 188
            ELPND ETFVHRSGRTGRAGK+G+AIL++T++QRRT+ SLERDVGCKF+F+S PA+EEVL
Sbjct: 433  ELPNDPETFVHRSGRTGRAGKQGNAILLYTSSQRRTVRSLERDVGCKFEFVSSPAMEEVL 492

Query: 187  ESSAVQVVATLSGVHPESVEFFTPTAQKMIDERGTSALAAAIAQLSGFSRPPSSRSLISY 8
            E+SA QVVATL GVHPESV+FFTPTAQK+I+E+GTSALAAA+AQLSGFSRPPSSRSLI++
Sbjct: 493  EASAEQVVATLCGVHPESVQFFTPTAQKLIEEQGTSALAAALAQLSGFSRPPSSRSLITH 552

Query: 7    EQ 2
            EQ
Sbjct: 553  EQ 554


>ref|XP_002512602.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223548563|gb|EEF50054.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 772

 Score =  516 bits (1329), Expect = e-144
 Identities = 257/303 (84%), Positives = 288/303 (95%)
 Frame = -1

Query: 910  SNSLKLGEVQFLVLDEADQMLAVGFEEDVEMILEKIPAERQSMLFSATMPGWVKKLSRKY 731
            S SLKLGEV++LVLDEADQML+ GFEEDVE+ILE +P++RQSMLFSATMP WVKKL+RKY
Sbjct: 261  SGSLKLGEVEYLVLDEADQMLSFGFEEDVEVILENLPSKRQSMLFSATMPTWVKKLARKY 320

Query: 730  LNNPLTIDLVGDQDEKLAEGIKLYALSTTSSSKRSILGDLVTVYAKGGKTIVFTQTKRDA 551
            L+NPL IDLVGDQ+EKLAEGIKLYA+ST ++SKRSIL DLVTVYAKGGKTI+FTQTKRDA
Sbjct: 321  LDNPLQIDLVGDQEEKLAEGIKLYAISTNATSKRSILSDLVTVYAKGGKTIIFTQTKRDA 380

Query: 550  DEVSMALTNSIASEALHGDISQHQRERTLNRFRQGKFTVLVATDVASRGLDIPNVDLIIH 371
            DEVSM LTNSIASEALHGDISQHQRERTLN FRQGKFTVLVATDVASRGLDIPNVDL+IH
Sbjct: 381  DEVSMVLTNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIH 440

Query: 370  YELPNDAETFVHRSGRTGRAGKEGSAILMFTNNQRRTISSLERDVGCKFDFISPPAVEEV 191
            YELPND ETFVHRSGRTGRAGKEG+A+LMFT++QRRT+ SLERDVGC+F+F+SPP  EEV
Sbjct: 441  YELPNDPETFVHRSGRTGRAGKEGTAVLMFTSSQRRTVKSLERDVGCRFEFVSPPGTEEV 500

Query: 190  LESSAVQVVATLSGVHPESVEFFTPTAQKMIDERGTSALAAAIAQLSGFSRPPSSRSLIS 11
            LESSA QV+ATLSGVHPESV FFTPTAQ++I+E+GTSALAAA+AQLSGFS+PPSSRSLIS
Sbjct: 501  LESSAEQVIATLSGVHPESVGFFTPTAQRLIEEQGTSALAAALAQLSGFSQPPSSRSLIS 560

Query: 10   YEQ 2
            +EQ
Sbjct: 561  HEQ 563


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