BLASTX nr result

ID: Panax21_contig00000668 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000668
         (623 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140393.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   169   5e-40
ref|XP_004140392.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   169   5e-40
ref|XP_002315832.1| predicted protein [Populus trichocarpa] gi|2...   165   7e-39
ref|XP_002311558.1| predicted protein [Populus trichocarpa] gi|1...   162   5e-38
ref|XP_002285291.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   159   5e-37

>ref|XP_004140393.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
           subunit 7-like isoform 2 [Cucumis sativus]
           gi|449445266|ref|XP_004140394.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] 1 beta subcomplex subunit
           7-like isoform 3 [Cucumis sativus]
           gi|449445268|ref|XP_004140395.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] 1 beta subcomplex subunit
           7-like isoform 4 [Cucumis sativus]
           gi|449528433|ref|XP_004171209.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] 1 beta subcomplex subunit
           7-like [Cucumis sativus]
          Length = 96

 Score =  169 bits (427), Expect = 5e-40
 Identities = 83/94 (88%), Positives = 87/94 (92%)
 Frame = -2

Query: 550 GSSKKMIATQEEMVEARVPIPYRDQCAHLLIPLNKCRQAELYLPWKCENERHSYEKCEYE 371
           GSSKKMIATQ EMVEARVPIPYRDQCAHLLIPLNKCRQ+E YLPWKCE+ERHSYEKCEYE
Sbjct: 5   GSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEKCEYE 64

Query: 370 LVMERMLQMQKIREKQDSQAKSKQGIPLIPKTAN 269
           LVMERMLQMQKIRE+   QAK K+GI LIPKTAN
Sbjct: 65  LVMERMLQMQKIREE---QAKLKKGIHLIPKTAN 95


>ref|XP_004140392.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
           subunit 7-like isoform 1 [Cucumis sativus]
          Length = 100

 Score =  169 bits (427), Expect = 5e-40
 Identities = 83/94 (88%), Positives = 87/94 (92%)
 Frame = -2

Query: 550 GSSKKMIATQEEMVEARVPIPYRDQCAHLLIPLNKCRQAELYLPWKCENERHSYEKCEYE 371
           GSSKKMIATQ EMVEARVPIPYRDQCAHLLIPLNKCRQ+E YLPWKCE+ERHSYEKCEYE
Sbjct: 5   GSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEKCEYE 64

Query: 370 LVMERMLQMQKIREKQDSQAKSKQGIPLIPKTAN 269
           LVMERMLQMQKIRE+   QAK K+GI LIPKTAN
Sbjct: 65  LVMERMLQMQKIREE---QAKLKKGIHLIPKTAN 95


>ref|XP_002315832.1| predicted protein [Populus trichocarpa] gi|222864872|gb|EEF02003.1|
           predicted protein [Populus trichocarpa]
          Length = 101

 Score =  165 bits (417), Expect = 7e-39
 Identities = 83/97 (85%), Positives = 87/97 (89%), Gaps = 2/97 (2%)
 Frame = -2

Query: 550 GSSKKMIATQEEMVEARVPIPYRDQCAHLLIPLNKCRQAELYLPWKCENERHSYEKCEYE 371
           GSSK MIATQEEMVEARVPIPYRDQCAHLLIPLNKCRQ+E +LPWKCENERH YEKCEYE
Sbjct: 5   GSSKPMIATQEEMVEARVPIPYRDQCAHLLIPLNKCRQSEFFLPWKCENERHVYEKCEYE 64

Query: 370 LVMERMLQMQKIREKQDSQAKS-KQG-IPLIPKTANA 266
           LVMERMLQMQKIRE +    +S KQG IPLIPKTANA
Sbjct: 65  LVMERMLQMQKIREAEAKLKQSHKQGTIPLIPKTANA 101


>ref|XP_002311558.1| predicted protein [Populus trichocarpa] gi|118482879|gb|ABK93354.1|
           unknown [Populus trichocarpa]
           gi|222851378|gb|EEE88925.1| predicted protein [Populus
           trichocarpa]
          Length = 101

 Score =  162 bits (410), Expect = 5e-38
 Identities = 82/97 (84%), Positives = 86/97 (88%), Gaps = 2/97 (2%)
 Frame = -2

Query: 550 GSSKKMIATQEEMVEARVPIPYRDQCAHLLIPLNKCRQAELYLPWKCENERHSYEKCEYE 371
           GSSK MIATQEEMVEARVPIPYRDQCAHLLIPLNKCR AE +LPWKCE+ERH YEKCEYE
Sbjct: 5   GSSKPMIATQEEMVEARVPIPYRDQCAHLLIPLNKCRHAEFFLPWKCESERHIYEKCEYE 64

Query: 370 LVMERMLQMQKIREKQDSQAKS-KQG-IPLIPKTANA 266
           LVMERMLQMQKIRE +    +S KQG IPLIPKTANA
Sbjct: 65  LVMERMLQMQKIREAEAKLKQSHKQGTIPLIPKTANA 101


>ref|XP_002285291.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
           subunit 7 [Vitis vinifera] gi|147777223|emb|CAN63291.1|
           hypothetical protein VITISV_025199 [Vitis vinifera]
          Length = 100

 Score =  159 bits (401), Expect = 5e-37
 Identities = 78/96 (81%), Positives = 85/96 (88%), Gaps = 1/96 (1%)
 Frame = -2

Query: 550 GSSKKMIATQEEMVEARVPIPYRDQCAHLLIPLNKCRQAELYLPWKCENERHSYEKCEYE 371
           GSSKKMIATQEEMVEA+VP+ YRDQCAHLLIPLNKCR AE YLPWKCE ERH YEKCEYE
Sbjct: 5   GSSKKMIATQEEMVEAKVPLGYRDQCAHLLIPLNKCRHAEFYLPWKCEAERHVYEKCEYE 64

Query: 370 LVMERMLQMQKIREKQDSQAKS-KQGIPLIPKTANA 266
           LVMERML+MQKI+E++    +S KQ IPLIPKTANA
Sbjct: 65  LVMERMLKMQKIQEEEAKLKQSQKQPIPLIPKTANA 100