BLASTX nr result

ID: Panax21_contig00000665 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000665
         (647 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21853.3| unnamed protein product [Vitis vinifera]              116   4e-24
ref|XP_002273215.1| PREDICTED: two pore calcium channel protein ...   116   4e-24
gb|ACH53197.1| two pore channel 1 [Vitis vinifera]                    116   4e-24
ref|XP_002330633.1| predicted protein [Populus trichocarpa] gi|2...   112   5e-23
ref|XP_002517914.1| Voltage-dependent L-type calcium channel, pu...   112   8e-23

>emb|CBI21853.3| unnamed protein product [Vitis vinifera]
          Length = 732

 Score =  116 bits (290), Expect = 4e-24
 Identities = 64/91 (70%), Positives = 70/91 (76%)
 Frame = -2

Query: 274 MDTPILVRGESSSGERIKGRWRDGLGTYTRRSDAIAYGSPYQKAAALVDLAEDGIGLPEE 95
           MD P+L  GESS G R     R     + RRSDAIAYGSPYQKAAALVDLAEDGIGLPE+
Sbjct: 1   MDKPLL-DGESSGGRR-----RGQTPVFHRRSDAIAYGSPYQKAAALVDLAEDGIGLPEQ 54

Query: 94  ILDDQSSFEDAAKFYFFFIRFDFLWSINYFA 2
           +L DQ SFE AAKFYF FIRF+FLWS+N FA
Sbjct: 55  ML-DQESFESAAKFYFIFIRFNFLWSLNLFA 84


>ref|XP_002273215.1| PREDICTED: two pore calcium channel protein 1A [Vitis vinifera]
          Length = 680

 Score =  116 bits (290), Expect = 4e-24
 Identities = 64/91 (70%), Positives = 70/91 (76%)
 Frame = -2

Query: 274 MDTPILVRGESSSGERIKGRWRDGLGTYTRRSDAIAYGSPYQKAAALVDLAEDGIGLPEE 95
           MD P+L  GESS G R     R     + RRSDAIAYGSPYQKAAALVDLAEDGIGLPE+
Sbjct: 1   MDKPLL-DGESSGGRR-----RGQTPVFHRRSDAIAYGSPYQKAAALVDLAEDGIGLPEQ 54

Query: 94  ILDDQSSFEDAAKFYFFFIRFDFLWSINYFA 2
           +L DQ SFE AAKFYF FIRF+FLWS+N FA
Sbjct: 55  ML-DQESFESAAKFYFIFIRFNFLWSLNLFA 84


>gb|ACH53197.1| two pore channel 1 [Vitis vinifera]
          Length = 680

 Score =  116 bits (290), Expect = 4e-24
 Identities = 64/91 (70%), Positives = 70/91 (76%)
 Frame = -2

Query: 274 MDTPILVRGESSSGERIKGRWRDGLGTYTRRSDAIAYGSPYQKAAALVDLAEDGIGLPEE 95
           MD P+L  GESS G R     R     + RRSDAIAYGSPYQKAAALVDLAEDGIGLPE+
Sbjct: 1   MDKPLL-DGESSGGRR-----RGQTPVFHRRSDAIAYGSPYQKAAALVDLAEDGIGLPEQ 54

Query: 94  ILDDQSSFEDAAKFYFFFIRFDFLWSINYFA 2
           +L DQ SFE AAKFYF FIRF+FLWS+N FA
Sbjct: 55  ML-DQESFESAAKFYFIFIRFNFLWSLNLFA 84


>ref|XP_002330633.1| predicted protein [Populus trichocarpa] gi|222872237|gb|EEF09368.1|
           predicted protein [Populus trichocarpa]
          Length = 726

 Score =  112 bits (281), Expect = 5e-23
 Identities = 59/92 (64%), Positives = 72/92 (78%), Gaps = 1/92 (1%)
 Frame = -2

Query: 274 MDTPILVRGESSSGERIKGRWRD-GLGTYTRRSDAIAYGSPYQKAAALVDLAEDGIGLPE 98
           M+ P+L  GESS G  I+ R RD     + RRSDAI +GSP+QKAAALVDLAEDGIG+PE
Sbjct: 1   MEKPLL--GESSGGRDIRFRRRDQSTPKFPRRSDAITHGSPFQKAAALVDLAEDGIGIPE 58

Query: 97  EILDDQSSFEDAAKFYFFFIRFDFLWSINYFA 2
           EIL DQ++FE  AKFYF FI+FD +W++NYFA
Sbjct: 59  EIL-DQANFESVAKFYFIFIQFDIIWTLNYFA 89


>ref|XP_002517914.1| Voltage-dependent L-type calcium channel, putative [Ricinus
           communis] gi|223542896|gb|EEF44432.1| Voltage-dependent
           L-type calcium channel, putative [Ricinus communis]
          Length = 743

 Score =  112 bits (279), Expect = 8e-23
 Identities = 58/83 (69%), Positives = 67/83 (80%)
 Frame = -2

Query: 250 GESSSGERIKGRWRDGLGTYTRRSDAIAYGSPYQKAAALVDLAEDGIGLPEEILDDQSSF 71
           GE+SSG+R      D   T+ RRSDAI  GSPYQKAAALVDLAEDG+GLPE+IL DQSSF
Sbjct: 8   GETSSGDRSFSD-TDRTATFNRRSDAITRGSPYQKAAALVDLAEDGVGLPEQIL-DQSSF 65

Query: 70  EDAAKFYFFFIRFDFLWSINYFA 2
           E  AKFYF +I+FDFLW++NYFA
Sbjct: 66  ERDAKFYFIYIQFDFLWTLNYFA 88


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