BLASTX nr result

ID: Panax21_contig00000650 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000650
         (1260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280765.1| PREDICTED: scarecrow-like protein 14 [Vitis ...   546   e-153
ref|XP_002533749.1| transcription factor, putative [Ricinus comm...   544   e-152
ref|NP_001234310.1| GRAS4 protein [Solanum lycopersicum] gi|8947...   543   e-152
ref|XP_002314168.1| GRAS family transcription factor [Populus tr...   536   e-150
ref|XP_002299863.1| GRAS family transcription factor [Populus tr...   535   e-149

>ref|XP_002280765.1| PREDICTED: scarecrow-like protein 14 [Vitis vinifera]
          Length = 704

 Score =  546 bits (1406), Expect = e-153
 Identities = 260/428 (60%), Positives = 329/428 (76%), Gaps = 12/428 (2%)
 Frame = +1

Query: 13   EVFYEELMCS------------MAPTKLQHRGQSKETKARRIRANRQGNKRELIDLRSLL 156
            EVF   L+C              A  KLQ  G+SK    +  R  +QGNK E++DLR+LL
Sbjct: 274  EVFDSALLCEDLNVSGICIVEEEARKKLQKNGESK-ANGKAGRRKKQGNKGEVVDLRALL 332

Query: 157  TQCAQAVQSSDVKNAGEILKRIRQHSSPNGDGTERLAHYFANAFEARLAGTGIELYTNFN 336
            TQCAQA+  S++++A ++LK IRQHSSP GDG +RLAH+FAN+ EARL+GTG+E+     
Sbjct: 333  TQCAQALAGSNLRSANDLLKMIRQHSSPCGDGVQRLAHFFANSLEARLSGTGLEMSKALV 392

Query: 337  RKRITAFDILKAYKAYVKACPFHKMSNILANKSILRLAKGATRLHIIDFGILYGFQWPCF 516
            RKR  A DI+KAY+ YV  CP  +MS+  AN+++ +LA+  TRLHIIDFGILYGFQWPC 
Sbjct: 393  RKRTPAGDIIKAYRLYVTVCPLRRMSHKFANRTMAKLAERETRLHIIDFGILYGFQWPCL 452

Query: 517  IQGLFRREGRPPKLRITGIDFPQPGFRPTERVEATGNHLARYCKKFNVPFEYNAIAKNWD 696
            IQ L  R G PPKLRITGID PQPGFRP ERVE TG  LA YC +FNVPFEY AIA+ WD
Sbjct: 453  IQLLSSRPGGPPKLRITGIDHPQPGFRPEERVEETGRRLANYCDRFNVPFEYKAIAQKWD 512

Query: 697  TIKLEDLKIEEDEMLVVNCLYRLRNMPDETADETSPRDAVLDLIKRINPDMFVHGVLNGT 876
            TI+LEDLKIE+DE++VVNCLYRL+N+ DET    SPRDAVL LI+ INP +F+HGV+NGT
Sbjct: 513  TIRLEDLKIEKDEVVVVNCLYRLKNLLDETVVANSPRDAVLKLIREINPAVFIHGVVNGT 572

Query: 877  YNAPFFITRFREAMFHFSSLFDMFEATELRKDKHRLLFEQEVFARDAMNVIGCEGTARIE 1056
            +NAPFF+TRFRE++FH+ +LFDMFEAT  R+D+ R+LFE+E+F  D MN+I CEG+ R E
Sbjct: 573  FNAPFFVTRFRESLFHYDTLFDMFEATVPREDQERMLFEREIFGMDIMNIIACEGSERFE 632

Query: 1057 RPETYKQWQYRNMKAGFRQLTLHKDIMKEVSAKVRMNYHKEFLVDEERNWMLQGWKGRVL 1236
            RPETYKQWQ RN++AG RQL L ++I+  V + V+++YHK+F+VDE+  WMLQGWKGR++
Sbjct: 633  RPETYKQWQIRNVRAGLRQLPLDQEIVTNVRSTVKLDYHKDFVVDEDGGWMLQGWKGRII 692

Query: 1237 YALSFWKP 1260
            YA+S WKP
Sbjct: 693  YAISCWKP 700


>ref|XP_002533749.1| transcription factor, putative [Ricinus communis]
            gi|223526337|gb|EEF28636.1| transcription factor,
            putative [Ricinus communis]
          Length = 688

 Score =  544 bits (1401), Expect = e-152
 Identities = 258/425 (60%), Positives = 319/425 (75%), Gaps = 9/425 (2%)
 Frame = +1

Query: 13   EVFYEELMCSMAP---------TKLQHRGQSKETKARRIRANRQGNKRELIDLRSLLTQC 165
            E+F E L+C              K ++    K +  R  R  RQGNK E++DL +LL QC
Sbjct: 261  EMFDEVLLCPSGKHESETCAFQDKSRNGASLKGSNGRTARGRRQGNKGEVVDLSTLLAQC 320

Query: 166  AQAVQSSDVKNAGEILKRIRQHSSPNGDGTERLAHYFANAFEARLAGTGIELYTNFNRKR 345
            AQ+V  SD + A E+L++IRQHSSP GDG +RLAHYFANA E RLAGTG   Y+     +
Sbjct: 321  AQSVSISDHRTATELLRQIRQHSSPYGDGNQRLAHYFANALETRLAGTGTPAYSPLLSSK 380

Query: 346  ITAFDILKAYKAYVKACPFHKMSNILANKSILRLAKGATRLHIIDFGILYGFQWPCFIQG 525
                DILKAY+ YVKACPF +MSN  AN++I +LA+ ATRLHIIDFG+LYGFQWPC IQ 
Sbjct: 381  TPVSDILKAYQVYVKACPFKRMSNFFANQTIFKLAEKATRLHIIDFGVLYGFQWPCLIQR 440

Query: 526  LFRREGRPPKLRITGIDFPQPGFRPTERVEATGNHLARYCKKFNVPFEYNAIAKNWDTIK 705
            L +R G PPKLRITGI+ PQPGFRP ERVE TG  L RYC++FNVPF+Y+A+A+ W+TIK
Sbjct: 441  LSQRPGGPPKLRITGIELPQPGFRPAERVEETGRRLQRYCERFNVPFKYHAVAQKWETIK 500

Query: 706  LEDLKIEEDEMLVVNCLYRLRNMPDETADETSPRDAVLDLIKRINPDMFVHGVLNGTYNA 885
             EDL I+  EM VVNCLYRLRN+PD+T    S RDAVL LI++I PD+F+HGV+NGTYNA
Sbjct: 501  YEDLNIDRGEMTVVNCLYRLRNLPDDTVVANSARDAVLKLIRKIRPDIFIHGVINGTYNA 560

Query: 886  PFFITRFREAMFHFSSLFDMFEATELRKDKHRLLFEQEVFARDAMNVIGCEGTARIERPE 1065
            PFF+TRFREA+F++S+LFDMFE    R+D  R+L+E+ +F RD MNVI CEG  R+ERPE
Sbjct: 561  PFFVTRFREALFYYSALFDMFEINVPREDDQRMLYEKAIFGRDIMNVIACEGAERVERPE 620

Query: 1066 TYKQWQYRNMKAGFRQLTLHKDIMKEVSAKVRMNYHKEFLVDEERNWMLQGWKGRVLYAL 1245
            TYKQWQ RN++AGFRQL+L ++I+K+V   VR  YHK+F+VDE   WMLQGWKGRV+ AL
Sbjct: 621  TYKQWQVRNLRAGFRQLSLDQEILKKVRCTVRSEYHKDFVVDENGRWMLQGWKGRVISAL 680

Query: 1246 SFWKP 1260
            S WKP
Sbjct: 681  SVWKP 685


>ref|NP_001234310.1| GRAS4 protein [Solanum lycopersicum] gi|89474466|gb|ABD72960.1| GRAS4
            [Solanum lycopersicum]
          Length = 666

 Score =  543 bits (1399), Expect = e-152
 Identities = 263/430 (61%), Positives = 330/430 (76%), Gaps = 14/430 (3%)
 Frame = +1

Query: 13   EVFYEELMCSMAPTKLQHRGQS-----------KETKARRIRANRQGN---KRELIDLRS 150
            E++   L+C   P   QH   S           K +K  R R  R+ +   K+E++DLR+
Sbjct: 229  EMYDNVLLCLNNPYVEQHSATSITSYSPPNEAKKTSKVGRPRGGRKHSSIVKKEMVDLRA 288

Query: 151  LLTQCAQAVQSSDVKNAGEILKRIRQHSSPNGDGTERLAHYFANAFEARLAGTGIELYTN 330
            LLTQCAQA+ + D + A E+L RIR+HS+P+GDGTERLAHY ANA EARL+GTG  LYT 
Sbjct: 289  LLTQCAQAMANYDSRTANELLMRIREHSTPHGDGTERLAHYLANALEARLSGTGTALYTA 348

Query: 331  FNRKRITAFDILKAYKAYVKACPFHKMSNILANKSILRLAKGATRLHIIDFGILYGFQWP 510
            +   RI+A +ILKAYKA+++ACPF  +SNI ANK I ++  GA ++HIIDFGILYGFQWP
Sbjct: 349  YAPSRISAANILKAYKAFIRACPFKLLSNIFANKYIRKVIAGAPKIHIIDFGILYGFQWP 408

Query: 511  CFIQGLFRREGRPPKLRITGIDFPQPGFRPTERVEATGNHLARYCKKFNVPFEYNAIAKN 690
            C IQGL  R G PP+LRITGID PQPGF+P  RVE TG  L +YCK+F+VPF + AIAK 
Sbjct: 409  CLIQGLSMRAGGPPELRITGIDLPQPGFKPAGRVEETGRRLEKYCKRFSVPFVFKAIAKK 468

Query: 691  WDTIKLEDLKIEEDEMLVVNCLYRLRNMPDETADETSPRDAVLDLIKRINPDMFVHGVLN 870
            W++I LE+L+++ DE+LVVN LYRL N+PDET    SPRDAVL+LI+RI PD+F+HG LN
Sbjct: 469  WESITLEELEVQRDEVLVVNSLYRLGNIPDETVVPNSPRDAVLNLIRRIRPDLFIHGALN 528

Query: 871  GTYNAPFFITRFREAMFHFSSLFDMFEATELRKDKHRLLFEQEVFARDAMNVIGCEGTAR 1050
            GT+N PFF+TRFREA+FHFSSL+DMFEAT  R+D+ R LFE+EVFARDAMNVI CEGT R
Sbjct: 529  GTFNTPFFVTRFREALFHFSSLYDMFEATLPREDEDRKLFEEEVFARDAMNVIACEGTER 588

Query: 1051 IERPETYKQWQYRNMKAGFRQLTLHKDIMKEVSAKVRMNYHKEFLVDEERNWMLQGWKGR 1230
            +ERPETYKQWQ R ++AGF+Q+ L ++I+K V  KVR  YH++F VDE+ +WMLQGWKGR
Sbjct: 589  VERPETYKQWQLRCVRAGFKQVPLDQEIVKIVRNKVRSEYHRDFSVDEDGHWMLQGWKGR 648

Query: 1231 VLYALSFWKP 1260
            V+YALS WKP
Sbjct: 649  VIYALSCWKP 658


>ref|XP_002314168.1| GRAS family transcription factor [Populus trichocarpa]
            gi|222850576|gb|EEE88123.1| GRAS family transcription
            factor [Populus trichocarpa]
          Length = 713

 Score =  536 bits (1381), Expect = e-150
 Identities = 251/396 (63%), Positives = 310/396 (78%)
 Frame = +1

Query: 73   QSKETKARRIRANRQGNKRELIDLRSLLTQCAQAVQSSDVKNAGEILKRIRQHSSPNGDG 252
            Q K +  R  R  ++G K E++DL SLL QCAQAV   D + A EIL++IRQHSS  GD 
Sbjct: 315  QRKGSNGRTTRGKKRGKKGEVVDLSSLLIQCAQAVAIGDQRTASEILQQIRQHSSSFGDA 374

Query: 253  TERLAHYFANAFEARLAGTGIELYTNFNRKRITAFDILKAYKAYVKACPFHKMSNILANK 432
             +RLAHYFANA + RLAGT    +T F   R +A +ILKAY+ YV+ACPF +MSN  AN+
Sbjct: 375  NQRLAHYFANALDTRLAGTTTPTFTLFVNPRTSAAEILKAYQVYVRACPFKRMSNFFANR 434

Query: 433  SILRLAKGATRLHIIDFGILYGFQWPCFIQGLFRREGRPPKLRITGIDFPQPGFRPTERV 612
            +IL+L K ATRLHIIDFGILYGFQWPC IQ L  R G PPKLRITGI+ PQPGFRP ERV
Sbjct: 435  TILKLEKKATRLHIIDFGILYGFQWPCLIQRLSERPGGPPKLRITGIELPQPGFRPAERV 494

Query: 613  EATGNHLARYCKKFNVPFEYNAIAKNWDTIKLEDLKIEEDEMLVVNCLYRLRNMPDETAD 792
            E TG  L RYC++F VPFEY  IA+ W+TI+ EDLKI++DE +VVNCLYRLRN+PD+T  
Sbjct: 495  EETGRRLERYCERFKVPFEYIPIAQKWETIRYEDLKIDKDEKVVVNCLYRLRNLPDDTIV 554

Query: 793  ETSPRDAVLDLIKRINPDMFVHGVLNGTYNAPFFITRFREAMFHFSSLFDMFEATELRKD 972
            E S RDAVL LI +I PDMF+HGV+NG +NAPFF+TRFREA++HFSSLFDMFEAT  R+D
Sbjct: 555  ENSARDAVLKLINKIKPDMFIHGVVNGNFNAPFFVTRFREALYHFSSLFDMFEATVSRED 614

Query: 973  KHRLLFEQEVFARDAMNVIGCEGTARIERPETYKQWQYRNMKAGFRQLTLHKDIMKEVSA 1152
            +HR++FE+E + RD  NVI CEG AR+ERPETYKQWQ RN++AGFRQL+L +++ K+V +
Sbjct: 615  EHRMMFEKEQYGRDITNVIACEGKARVERPETYKQWQSRNLRAGFRQLSLDQELFKDVRS 674

Query: 1153 KVRMNYHKEFLVDEERNWMLQGWKGRVLYALSFWKP 1260
             V+  Y K+F+VD +  W+LQGWKGR++YALS WKP
Sbjct: 675  VVKSEYDKDFVVDADGQWVLQGWKGRIIYALSVWKP 710


>ref|XP_002299863.1| GRAS family transcription factor [Populus trichocarpa]
            gi|222847121|gb|EEE84668.1| GRAS family transcription
            factor [Populus trichocarpa]
          Length = 712

 Score =  535 bits (1377), Expect = e-149
 Identities = 256/429 (59%), Positives = 325/429 (75%), Gaps = 13/429 (3%)
 Frame = +1

Query: 13   EVFYEELMCSMAPT---------KLQHRG----QSKETKARRIRANRQGNKRELIDLRSL 153
            E+F E L+CS A           K Q+      Q K +  R  RA R+ NK E++DL SL
Sbjct: 281  ELFDEVLLCSGAQNVSASCALLDKSQNGAGRNEQRKGSNGRAARAKRKENKEEVVDLSSL 340

Query: 154  LTQCAQAVQSSDVKNAGEILKRIRQHSSPNGDGTERLAHYFANAFEARLAGTGIELYTNF 333
            LTQCAQAV   D + A E+LK+IRQHSSP GD  +RLAHYFANA + RLAGT    +   
Sbjct: 341  LTQCAQAVAIGDQRTASELLKQIRQHSSPFGDANQRLAHYFANALDTRLAGTMTPTFAPI 400

Query: 334  NRKRITAFDILKAYKAYVKACPFHKMSNILANKSILRLAKGATRLHIIDFGILYGFQWPC 513
               R +A + +KAY+ YV+ACPF +MSN  AN++IL+LAK ATRLHIIDFGILYGFQWPC
Sbjct: 401  ASHRTSAAESVKAYQVYVRACPFKRMSNFFANRTILKLAKKATRLHIIDFGILYGFQWPC 460

Query: 514  FIQGLFRREGRPPKLRITGIDFPQPGFRPTERVEATGNHLARYCKKFNVPFEYNAIAKNW 693
             IQ L  R G PP+LRITGI+ PQP FRP ERVE TG  L +YC++F VPFEY+AIA+ W
Sbjct: 461  LIQRLSERPGGPPRLRITGIELPQPDFRPAERVEETGRRLEKYCERFKVPFEYDAIAQKW 520

Query: 694  DTIKLEDLKIEEDEMLVVNCLYRLRNMPDETADETSPRDAVLDLIKRINPDMFVHGVLNG 873
            +TI+ EDL+I+EDEM+VVN LYRLRN+PD+T  E S RDAVL LI +I PDMF+HGV+NG
Sbjct: 521  ETIRYEDLRIDEDEMIVVNSLYRLRNLPDDTVVENSARDAVLKLINKIKPDMFIHGVVNG 580

Query: 874  TYNAPFFITRFREAMFHFSSLFDMFEATELRKDKHRLLFEQEVFARDAMNVIGCEGTARI 1053
             +NAP+F+TRFREA++H+SSLFDMFEA   R+D++R+LFE+E + R+ +NVI CEGT+R+
Sbjct: 581  AFNAPYFVTRFREALYHYSSLFDMFEANVSREDENRMLFEKERYGREIINVIACEGTSRV 640

Query: 1054 ERPETYKQWQYRNMKAGFRQLTLHKDIMKEVSAKVRMNYHKEFLVDEERNWMLQGWKGRV 1233
            ERPETYKQWQ RN++AGFRQLTL  ++ K+V + V+  YHK+F+VD +  WMLQGWKGR+
Sbjct: 641  ERPETYKQWQSRNLRAGFRQLTLDPELFKDVRSVVKSEYHKDFVVDADGQWMLQGWKGRI 700

Query: 1234 LYALSFWKP 1260
            ++ALS W+P
Sbjct: 701  IHALSVWEP 709


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