BLASTX nr result

ID: Panax21_contig00000629 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000629
         (690 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB75429.1| oligouridylate binding protein [Nicotiana plumba...   133   4e-29
ref|XP_002276983.1| PREDICTED: nucleolysin TIAR isoform 1 [Vitis...   125   6e-27
ref|XP_002277008.1| PREDICTED: nucleolysin TIAR isoform 2 [Vitis...   125   6e-27
ref|XP_003551097.1| PREDICTED: nucleolysin TIAR-like [Glycine max]    118   1e-24
ref|XP_003528601.1| PREDICTED: nucleolysin TIAR-like [Glycine max]    117   2e-24

>emb|CAB75429.1| oligouridylate binding protein [Nicotiana plumbaginifolia]
          Length = 406

 Score =  133 bits (334), Expect = 4e-29
 Identities = 66/120 (55%), Positives = 79/120 (65%), Gaps = 1/120 (0%)
 Frame = -1

Query: 585 ISLVSDKGFGFVRYSNHAEAARAIQMGNARILFGKPIKCXXXXXXXXXXXXXXXXXXXTV 406
           + +  DKGFGFVRYS+HAEAARAIQ+GNAR+LFGKP+KC                    +
Sbjct: 286 VRIQRDKGFGFVRYSSHAEAARAIQLGNARLLFGKPVKCSWGSKPTPPGSSSNPLPPPAI 345

Query: 405 AHVPGFTTADLIAYERQLALSKMGSAQALMHQQAQRIGA-SQAIYDGGYPSIGTTRPPMY 229
             +PG +  DL AY+RQLAL+KM  AQA M  Q QRIGA  Q IYDGGY  I +T+PPMY
Sbjct: 346 GQIPGLSAMDLAAYQRQLALAKMAGAQAFMQPQGQRIGAPGQGIYDGGYGGIASTQPPMY 405


>ref|XP_002276983.1| PREDICTED: nucleolysin TIAR isoform 1 [Vitis vinifera]
          Length = 429

 Score =  125 bits (315), Expect = 6e-27
 Identities = 69/127 (54%), Positives = 76/127 (59%), Gaps = 11/127 (8%)
 Frame = -1

Query: 570 DKGFGFVRYSNHAEAARAIQMGNARILFGKPIKCXXXXXXXXXXXXXXXXXXXTVAHVPG 391
           DKGFGFVRYS HAEAA AIQMGNARIL GKPIKC                      H+PG
Sbjct: 303 DKGFGFVRYSTHAEAALAIQMGNARILCGKPIKCSWGSKPTPAGTSSTPLPPPAAPHMPG 362

Query: 390 FTTADLIAYERQLALSKMGSAQALMHQQAQRI-----------GASQAIYDGGYPSIGTT 244
            + AD  AYERQ+ALSKMG AQ LMH QAQ             G+SQAIYDGG+ +  TT
Sbjct: 363 ISAADFAAYERQMALSKMGGAQGLMHPQAQHALKQTAMGMGAGGSSQAIYDGGFQNAATT 422

Query: 243 RPPMYCQ 223
           +  MY Q
Sbjct: 423 QQLMYYQ 429


>ref|XP_002277008.1| PREDICTED: nucleolysin TIAR isoform 2 [Vitis vinifera]
          Length = 426

 Score =  125 bits (315), Expect = 6e-27
 Identities = 69/127 (54%), Positives = 76/127 (59%), Gaps = 11/127 (8%)
 Frame = -1

Query: 570 DKGFGFVRYSNHAEAARAIQMGNARILFGKPIKCXXXXXXXXXXXXXXXXXXXTVAHVPG 391
           DKGFGFVRYS HAEAA AIQMGNARIL GKPIKC                      H+PG
Sbjct: 300 DKGFGFVRYSTHAEAALAIQMGNARILCGKPIKCSWGSKPTPAGTSSTPLPPPAAPHMPG 359

Query: 390 FTTADLIAYERQLALSKMGSAQALMHQQAQRI-----------GASQAIYDGGYPSIGTT 244
            + AD  AYERQ+ALSKMG AQ LMH QAQ             G+SQAIYDGG+ +  TT
Sbjct: 360 ISAADFAAYERQMALSKMGGAQGLMHPQAQHALKQTAMGMGAGGSSQAIYDGGFQNAATT 419

Query: 243 RPPMYCQ 223
           +  MY Q
Sbjct: 420 QQLMYYQ 426


>ref|XP_003551097.1| PREDICTED: nucleolysin TIAR-like [Glycine max]
          Length = 411

 Score =  118 bits (295), Expect = 1e-24
 Identities = 68/124 (54%), Positives = 76/124 (61%), Gaps = 8/124 (6%)
 Frame = -1

Query: 570 DKGFGFVRYSNHAEAARAIQMGNARILFGKPIKCXXXXXXXXXXXXXXXXXXXTVAHVPG 391
           DKGFGFVRYS HAEAA AIQMGNARILFGKPIKC                   T A+V G
Sbjct: 288 DKGFGFVRYSTHAEAALAIQMGNARILFGKPIKCSWGSKPTPPGTASTPLPPPTSANVSG 347

Query: 390 FTTADLIAYERQLALSKMGSAQALMHQQAQR--------IGASQAIYDGGYPSIGTTRPP 235
           F+ A L AYERQ+ALSKMG A ALMHQQ Q         +GA  A YD  + ++ TT+  
Sbjct: 348 FSLASLAAYERQMALSKMGGAHALMHQQGQHALKQVAMGMGAPGAGYDARFQNVATTQHL 407

Query: 234 MYCQ 223
           MY Q
Sbjct: 408 MYYQ 411


>ref|XP_003528601.1| PREDICTED: nucleolysin TIAR-like [Glycine max]
          Length = 422

 Score =  117 bits (294), Expect = 2e-24
 Identities = 65/124 (52%), Positives = 75/124 (60%), Gaps = 8/124 (6%)
 Frame = -1

Query: 570 DKGFGFVRYSNHAEAARAIQMGNAR-ILFGKPIKCXXXXXXXXXXXXXXXXXXXTVAHVP 394
           DKGFGFVRYS HAEAA AIQMGNA+ +L GKPIKC                     A +P
Sbjct: 299 DKGFGFVRYSTHAEAALAIQMGNAQSLLCGKPIKCSWGSKPTPPGTASNPLPPPAAASLP 358

Query: 393 GFTTADLIAYERQLALSKMGSAQALMHQQAQR-------IGASQAIYDGGYPSIGTTRPP 235
           G +  DL+AYERQLA+SKMG   ALMH Q Q        IGASQAIYDGG+ ++   +  
Sbjct: 359 GLSATDLLAYERQLAISKMGGVHALMHPQGQHHLKQAAAIGASQAIYDGGFQNVAAAQQM 418

Query: 234 MYCQ 223
           MY Q
Sbjct: 419 MYYQ 422


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