BLASTX nr result

ID: Panax21_contig00000598 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000598
         (680 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270104.1| PREDICTED: short-chain dehydrogenase TIC 32,...   319   3e-85
ref|XP_002513680.1| short-chain dehydrogenase, putative [Ricinus...   312   4e-83
ref|XP_002274932.1| PREDICTED: short-chain dehydrogenase TIC 32,...   311   6e-83
ref|XP_002272242.2| PREDICTED: short-chain dehydrogenase TIC 32,...   311   6e-83
ref|XP_004145894.1| PREDICTED: short-chain dehydrogenase TIC 32,...   311   8e-83

>ref|XP_002270104.1| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Vitis
           vinifera] gi|302143828|emb|CBI22689.3| unnamed protein
           product [Vitis vinifera]
          Length = 313

 Score =  319 bits (818), Expect = 3e-85
 Identities = 158/226 (69%), Positives = 189/226 (83%)
 Frame = -3

Query: 678 MGVRNVKAGEKVKEELLQKYPNAKIDVLEIDLNSLASVRKFASEYISSGFPLNILINNAG 499
           MGVRN+ AG++VKE ++++ P AK+D +E+DL+S+ASVRKFASEY SSG PLNILINNAG
Sbjct: 58  MGVRNMSAGKEVKEAIVKEIPTAKVDAMELDLSSMASVRKFASEYNSSGLPLNILINNAG 117

Query: 498 IVAPPFTLSKDNIEQQFAVNHLGPFLLTNLLLETMKKTARESQKEGRIINLSSVLHKSGY 319
           I+A P+ LSKDNIE QFA NHLG FLLTNLLL+TMKKT R+S+KEGRI+N+SS+ H+  Y
Sbjct: 118 IMAVPYMLSKDNIEMQFATNHLGHFLLTNLLLDTMKKTTRKSRKEGRIVNVSSMAHRYPY 177

Query: 318 KEGIRFDKINDESSYSGNTAYAQSKLCNLLHTNELARRLKEEGVNITANSLHPGVIATNI 139
           +EGIRFDKIND+S YS   AY QSKL N+LH NELARR KE+GV+ITANSLHPG I TN+
Sbjct: 178 REGIRFDKINDKSGYSSLFAYGQSKLANVLHANELARRFKEDGVDITANSLHPGAIVTNL 237

Query: 138 TNNLNLVGWLFFTVGKYFLKNVPQGAATTCYLALHPQVKGVSGEYF 1
               ++V  L  TVGK  LKNV QGAATTCY+ALHPQVKGVSG+YF
Sbjct: 238 FRCSSIVSGLVNTVGKLVLKNVQQGAATTCYVALHPQVKGVSGQYF 283


>ref|XP_002513680.1| short-chain dehydrogenase, putative [Ricinus communis]
           gi|223547588|gb|EEF49083.1| short-chain dehydrogenase,
           putative [Ricinus communis]
          Length = 313

 Score =  312 bits (799), Expect = 4e-83
 Identities = 150/226 (66%), Positives = 183/226 (80%)
 Frame = -3

Query: 678 MGVRNVKAGEKVKEELLQKYPNAKIDVLEIDLNSLASVRKFASEYISSGFPLNILINNAG 499
           M VRN+ +G  VKE ++++ P AK+D +E+DL+S+ASVRKFAS++ SSG PLNILINNAG
Sbjct: 58  MAVRNLVSGRNVKETIIKEIPTAKVDAMELDLSSMASVRKFASDFNSSGLPLNILINNAG 117

Query: 498 IVAPPFTLSKDNIEQQFAVNHLGPFLLTNLLLETMKKTARESQKEGRIINLSSVLHKSGY 319
           ++A PF LSKDNIE QFA NHLG FLLTNLLL+TMKKTA +S +EGRI+N+SS  H+  Y
Sbjct: 118 VMATPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTAHQSNREGRIVNVSSEAHRYSY 177

Query: 318 KEGIRFDKINDESSYSGNTAYAQSKLCNLLHTNELARRLKEEGVNITANSLHPGVIATNI 139
            EGIRFDKIND S YS   AY QSKL N+LH NEL RRLKE+GVNITANSLHPG I TN+
Sbjct: 178 HEGIRFDKINDRSGYSSFRAYGQSKLANVLHANELTRRLKEDGVNITANSLHPGAIVTNL 237

Query: 138 TNNLNLVGWLFFTVGKYFLKNVPQGAATTCYLALHPQVKGVSGEYF 1
             ++N++  +   +GK  LKNV QGAATTCY+A+HPQVKG+SGEYF
Sbjct: 238 FRHMNIINGMVNVLGKLVLKNVQQGAATTCYVAMHPQVKGISGEYF 283


>ref|XP_002274932.1| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic isoform
           1 [Vitis vinifera] gi|297742509|emb|CBI34658.3| unnamed
           protein product [Vitis vinifera]
          Length = 315

 Score =  311 bits (798), Expect = 6e-83
 Identities = 157/226 (69%), Positives = 182/226 (80%)
 Frame = -3

Query: 678 MGVRNVKAGEKVKEELLQKYPNAKIDVLEIDLNSLASVRKFASEYISSGFPLNILINNAG 499
           M VRNV AG  VKE +L++ P AK+DV+E+DL+SL SVRKFASEY S G PLN+LINNAG
Sbjct: 58  MAVRNVDAGRNVKETILKEIPTAKVDVMELDLSSLPSVRKFASEYKSLGLPLNLLINNAG 117

Query: 498 IVAPPFTLSKDNIEQQFAVNHLGPFLLTNLLLETMKKTARESQKEGRIINLSSVLHKSGY 319
           ++A PF LS DNIE QFA NHLG FLLTNLLLETMK TARES +EGRI+N+SS  H+  Y
Sbjct: 118 VMATPFLLSHDNIELQFATNHLGHFLLTNLLLETMKNTARESGREGRIVNVSSEGHRFPY 177

Query: 318 KEGIRFDKINDESSYSGNTAYAQSKLCNLLHTNELARRLKEEGVNITANSLHPGVIATNI 139
            EGI FDKINDES+Y+   AY QSKL N+LH NELA+RL+EEGV ITANSLHPG IATN+
Sbjct: 178 SEGICFDKINDESAYNSVYAYGQSKLANILHANELAKRLQEEGVEITANSLHPGAIATNL 237

Query: 138 TNNLNLVGWLFFTVGKYFLKNVPQGAATTCYLALHPQVKGVSGEYF 1
               + +  +   VGKY LKN+PQGAATTCY+ALHPQVKGVSGEYF
Sbjct: 238 LRYHSFLDGIVNMVGKYVLKNIPQGAATTCYVALHPQVKGVSGEYF 283


>ref|XP_002272242.2| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like
           [Vitis vinifera] gi|147792549|emb|CAN65620.1|
           hypothetical protein VITISV_040852 [Vitis vinifera]
           gi|302143827|emb|CBI22688.3| unnamed protein product
           [Vitis vinifera]
          Length = 313

 Score =  311 bits (798), Expect = 6e-83
 Identities = 153/226 (67%), Positives = 184/226 (81%)
 Frame = -3

Query: 678 MGVRNVKAGEKVKEELLQKYPNAKIDVLEIDLNSLASVRKFASEYISSGFPLNILINNAG 499
           M VRN+ AG +VKE + ++ P AKID +E+DL+S+ASVRKFASE+ SSG PLN+LINNAG
Sbjct: 58  MAVRNMAAGREVKEAIAKEIPTAKIDAMELDLSSMASVRKFASEFSSSGLPLNLLINNAG 117

Query: 498 IVAPPFTLSKDNIEQQFAVNHLGPFLLTNLLLETMKKTARESQKEGRIINLSSVLHKSGY 319
           ++A PF LSKDNIE QFA NH+G FLLTNLLLETMKKTARES KEGRI+N+SS  H+  Y
Sbjct: 118 LMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMKKTARESNKEGRIVNVSSRRHRFSY 177

Query: 318 KEGIRFDKINDESSYSGNTAYAQSKLCNLLHTNELARRLKEEGVNITANSLHPGVIATNI 139
            EGIRFD IND+S Y+  +AY QSKL N+LH NEL+RRLK++G NITANSLHPG IATN+
Sbjct: 178 HEGIRFDMINDQSGYNRLSAYGQSKLANVLHANELSRRLKDDGANITANSLHPGAIATNL 237

Query: 138 TNNLNLVGWLFFTVGKYFLKNVPQGAATTCYLALHPQVKGVSGEYF 1
             ++ LVG      GKY +KNV QGAATTCY+ALHP+VKG +GEYF
Sbjct: 238 FRHVPLVGGFIDIFGKYVVKNVQQGAATTCYVALHPEVKGTTGEYF 283


>ref|XP_004145894.1| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like
           [Cucumis sativus]
          Length = 313

 Score =  311 bits (797), Expect = 8e-83
 Identities = 155/226 (68%), Positives = 182/226 (80%)
 Frame = -3

Query: 678 MGVRNVKAGEKVKEELLQKYPNAKIDVLEIDLNSLASVRKFASEYISSGFPLNILINNAG 499
           MGVRN++AG  V+E ++++ P+AKID +E+DL+S+ SVRKFAS+Y SSGFPLNILINNAG
Sbjct: 58  MGVRNLEAGRNVRETIVKENPSAKIDAMELDLSSMVSVRKFASDYQSSGFPLNILINNAG 117

Query: 498 IVAPPFTLSKDNIEQQFAVNHLGPFLLTNLLLETMKKTARESQKEGRIINLSSVLHKSGY 319
           I+A PF LSKDNIE QFA NH+G FLLTNLLLE MKKTA ES+KEGRI+N+SS  H+  Y
Sbjct: 118 IMATPFGLSKDNIEVQFATNHIGHFLLTNLLLENMKKTAAESKKEGRIVNVSSEAHRYTY 177

Query: 318 KEGIRFDKINDESSYSGNTAYAQSKLCNLLHTNELARRLKEEGVNITANSLHPGVIATNI 139
            EGIRFD INDE  Y+   AY QSKL N+LH NEL RR KEEG+NITANSLHPG+I TN+
Sbjct: 178 PEGIRFDGINDELRYNKMQAYGQSKLSNILHANELTRRFKEEGLNITANSLHPGIITTNL 237

Query: 138 TNNLNLVGWLFFTVGKYFLKNVPQGAATTCYLALHPQVKGVSGEYF 1
             + N    +  TVGK   KNV QGAATTCY+ALHPQVKGVSGEYF
Sbjct: 238 FRHFNYGNGIVNTVGKIMFKNVQQGAATTCYVALHPQVKGVSGEYF 283


Top