BLASTX nr result

ID: Panax21_contig00000591 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000591
         (538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511475.1| Microtubule-associated protein TORTIFOLIA1, ...   101   6e-20
ref|XP_004138291.1| PREDICTED: microtubule-associated protein TO...   100   1e-19
ref|XP_002318624.1| predicted protein [Populus trichocarpa] gi|2...    96   3e-18
ref|XP_002322140.1| predicted protein [Populus trichocarpa] gi|2...    93   2e-17
emb|CBI15107.3| unnamed protein product [Vitis vinifera]               93   3e-17

>ref|XP_002511475.1| Microtubule-associated protein TORTIFOLIA1, putative [Ricinus
           communis] gi|223550590|gb|EEF52077.1|
           Microtubule-associated protein TORTIFOLIA1, putative
           [Ricinus communis]
          Length = 613

 Score =  101 bits (252), Expect = 6e-20
 Identities = 59/134 (44%), Positives = 83/134 (61%), Gaps = 9/134 (6%)
 Frame = -1

Query: 538 RFDKVKVVRETMNQMVEAWREIPDVSDEVSLPGESQSSSKEVATDGCYLPGSKTWHTISS 359
           +FDKVK  RE M+QM+EAW+++PDVS++VS P  S +SSKE A+DG Y   SK       
Sbjct: 258 KFDKVKAAREVMHQMIEAWKQVPDVSEDVSPPPRSLASSKEDASDGRYPLSSKNSCAAGF 317

Query: 358 GAPQVRKNYSLA-------NGSPARALKRSPLDCSIKKTYPTMFRKLDHKKRPANWKVDI 200
             PQ+RK  +LA       + +     +R  L  + KKT   +FRK+D KK P +WKVD+
Sbjct: 318 QTPQMRKKPALASRTTPPDDSAATFTRRRGSLKSTEKKTSSALFRKVDCKK-PFDWKVDV 376

Query: 199 AAP--SVTVAKIVD 164
           A P  + T+A++VD
Sbjct: 377 AIPNNTTTLAEVVD 390


>ref|XP_004138291.1| PREDICTED: microtubule-associated protein TORTIFOLIA1-like [Cucumis
           sativus] gi|449477623|ref|XP_004155074.1| PREDICTED:
           microtubule-associated protein TORTIFOLIA1-like [Cucumis
           sativus]
          Length = 628

 Score =  100 bits (250), Expect = 1e-19
 Identities = 59/121 (48%), Positives = 76/121 (62%), Gaps = 7/121 (5%)
 Frame = -1

Query: 538 RFDKVKVVRETMNQMVEAWREIPDVSDEVSLPGESQSSSKEVATDGCYLPGSKTWHTISS 359
           RFDKVK VRE M+QM+EAW++IPD+SDE S P  SQSSSKE+ +DG Y PG K   +   
Sbjct: 261 RFDKVKAVREVMSQMLEAWKQIPDLSDEASAPAYSQSSSKEIVSDGRYPPGFKNNSSARL 320

Query: 358 GAPQVRKNYSLA------NGSPARAL-KRSPLDCSIKKTYPTMFRKLDHKKRPANWKVDI 200
            AP  RKN   A      + SPA A  +RS L    KK   +M +K + KK P +WKV++
Sbjct: 321 DAPLPRKNVISAYRSTPPDASPATAARRRSSLSGGDKKASLSMLQKAERKK-PLDWKVEV 379

Query: 199 A 197
           +
Sbjct: 380 S 380


>ref|XP_002318624.1| predicted protein [Populus trichocarpa] gi|222859297|gb|EEE96844.1|
           predicted protein [Populus trichocarpa]
          Length = 624

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 55/125 (44%), Positives = 76/125 (60%), Gaps = 8/125 (6%)
 Frame = -1

Query: 538 RFDKVKVVRETMNQMVEAWREIPDVSDEVSLPGESQSSSKEVATDGCYLPGSKTWHTISS 359
           R+DKVK  RE MN+ +EAW+++PDVS+E S P  S +SS+E A+DG +  GSK  H   S
Sbjct: 259 RYDKVKAAREVMNETIEAWKQVPDVSEEESPPPRSLASSREDASDGRHGSGSKKLHLAGS 318

Query: 358 GAPQVRKNYSL--ANGSPARAL------KRSPLDCSIKKTYPTMFRKLDHKKRPANWKVD 203
            APQ+ K   L   N  P  +L      KR PL  + + T P M+ K+D KK   +WKV+
Sbjct: 319 EAPQMMKKSILDFKNTPPDSSLIATTARKRGPLKSTDEGTNPAMYGKVDQKKM-VDWKVE 377

Query: 202 IAAPS 188
           I+ P+
Sbjct: 378 ISVPN 382


>ref|XP_002322140.1| predicted protein [Populus trichocarpa] gi|222869136|gb|EEF06267.1|
           predicted protein [Populus trichocarpa]
          Length = 611

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 57/124 (45%), Positives = 76/124 (61%), Gaps = 7/124 (5%)
 Frame = -1

Query: 538 RFDKVKVVRETMNQMVEAWREIPDVSDEVSLPGESQSSSKEVATDGCYLPGSKTWHTISS 359
           RFDKVK  RE MN+ +EAW+++PDVS+E S P  S +SS+E A+D  +  GSK      S
Sbjct: 259 RFDKVKAAREVMNETIEAWKQVPDVSEEASPPPRSLASSREDASDKRHWSGSKNSCAAGS 318

Query: 358 GAPQVRKNYSLA------NGS-PARALKRSPLDCSIKKTYPTMFRKLDHKKRPANWKVDI 200
            A Q+ K   LA      +GS  A A KRSPL  + KKT   M+ K+D KK   +WKV+I
Sbjct: 319 EATQMGKKSILAMRTTPPDGSLAATARKRSPLKSTEKKTSLAMYGKVDQKKL-VDWKVEI 377

Query: 199 AAPS 188
           + P+
Sbjct: 378 SVPN 381


>emb|CBI15107.3| unnamed protein product [Vitis vinifera]
          Length = 521

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 58/123 (47%), Positives = 77/123 (62%), Gaps = 7/123 (5%)
 Frame = -1

Query: 538 RFDKVKVVRETMNQMVEAWREIPDVSDEVSLPGESQSSSKEVATDGCYLPGSKTWHTISS 359
           RFDKVK VR+TMNQM+ AW+EIPDVS++VS P +SQSSSKE A+DG Y   S+   T  S
Sbjct: 145 RFDKVKAVRDTMNQMLGAWKEIPDVSNDVSPPPQSQSSSKENASDGRYPLESRNSCTGGS 204

Query: 358 GAPQVRK-------NYSLANGSPARALKRSPLDCSIKKTYPTMFRKLDHKKRPANWKVDI 200
             P +RK       +  L + S     +R P+D    K+   MFRKL+ KK  ++ KV++
Sbjct: 205 EVPLMRKKSIPTSISPQLNSSSATTVRRRGPVD----KSGSAMFRKLERKK-ASDLKVEV 259

Query: 199 AAP 191
            AP
Sbjct: 260 TAP 262


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