BLASTX nr result

ID: Panax21_contig00000590 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000590
         (540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511475.1| Microtubule-associated protein TORTIFOLIA1, ...   101   8e-20
ref|XP_002318624.1| predicted protein [Populus trichocarpa] gi|2...    96   5e-18
ref|XP_004138291.1| PREDICTED: microtubule-associated protein TO...    95   6e-18
ref|XP_002322140.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17
emb|CBI15107.3| unnamed protein product [Vitis vinifera]               94   2e-17

>ref|XP_002511475.1| Microtubule-associated protein TORTIFOLIA1, putative [Ricinus
           communis] gi|223550590|gb|EEF52077.1|
           Microtubule-associated protein TORTIFOLIA1, putative
           [Ricinus communis]
          Length = 613

 Score =  101 bits (251), Expect = 8e-20
 Identities = 56/126 (44%), Positives = 78/126 (61%)
 Frame = -1

Query: 537 RETMNQMVEAWREIPDVSDEVSLPGESQSSSKEVATDGCYLPGSKTLHTISSGAPQVRKN 358
           RE M+QM+EAW+++PDVS++VS P  S +SSKE A+DG Y   SK         PQ+RK 
Sbjct: 266 REVMHQMIEAWKQVPDVSEDVSPPPRSLASSKEDASDGRYPLSSKNSCAAGFQTPQMRKK 325

Query: 357 YSLANGSPARDGSSPATTLKRSPLDFSIKKTDPAMFRKLDHKKRPANWKVDIAAPSVTVV 178
            +LA+ +   D S+   T +R  L  + KKT  A+FRK+D KK P +WKVD+A P+ T  
Sbjct: 326 PALASRTTPPDDSAATFTRRRGSLKSTEKKTSSALFRKVDCKK-PFDWKVDVAIPNNTTT 384

Query: 177 SGDSKD 160
             +  D
Sbjct: 385 LAEVVD 390


>ref|XP_002318624.1| predicted protein [Populus trichocarpa] gi|222859297|gb|EEE96844.1|
           predicted protein [Populus trichocarpa]
          Length = 624

 Score = 95.5 bits (236), Expect = 5e-18
 Identities = 54/117 (46%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
 Frame = -1

Query: 537 RETMNQMVEAWREIPDVSDEVSLPGESQSSSKEVATDGCYLPGSKTLHTISSGAPQVRKN 358
           RE MN+ +EAW+++PDVS+E S P  S +SS+E A+DG +  GSK LH   S APQ+ K 
Sbjct: 267 REVMNETIEAWKQVPDVSEEESPPPRSLASSREDASDGRHGSGSKKLHLAGSEAPQMMKK 326

Query: 357 YSLANGSPARDGSSPATTL-KRSPLDFSIKKTDPAMFRKLDHKKRPANWKVDIAAPS 190
             L   +   D S  ATT  KR PL  + + T+PAM+ K+D KK   +WKV+I+ P+
Sbjct: 327 SILDFKNTPPDSSLIATTARKRGPLKSTDEGTNPAMYGKVDQKKM-VDWKVEISVPN 382


>ref|XP_004138291.1| PREDICTED: microtubule-associated protein TORTIFOLIA1-like [Cucumis
           sativus] gi|449477623|ref|XP_004155074.1| PREDICTED:
           microtubule-associated protein TORTIFOLIA1-like [Cucumis
           sativus]
          Length = 628

 Score = 95.1 bits (235), Expect = 6e-18
 Identities = 52/114 (45%), Positives = 68/114 (59%)
 Frame = -1

Query: 540 VRETMNQMVEAWREIPDVSDEVSLPGESQSSSKEVATDGCYLPGSKTLHTISSGAPQVRK 361
           VRE M+QM+EAW++IPD+SDE S P  SQSSSKE+ +DG Y PG K   +    AP  RK
Sbjct: 268 VREVMSQMLEAWKQIPDLSDEASAPAYSQSSSKEIVSDGRYPPGFKNNSSARLDAPLPRK 327

Query: 360 NYSLANGSPARDGSSPATTLKRSPLDFSIKKTDPAMFRKLDHKKRPANWKVDIA 199
           N   A  S   D S      +RS L    KK   +M +K + KK P +WKV+++
Sbjct: 328 NVISAYRSTPPDASPATAARRRSSLSGGDKKASLSMLQKAERKK-PLDWKVEVS 380


>ref|XP_002322140.1| predicted protein [Populus trichocarpa] gi|222869136|gb|EEF06267.1|
           predicted protein [Populus trichocarpa]
          Length = 611

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 53/116 (45%), Positives = 72/116 (62%)
 Frame = -1

Query: 537 RETMNQMVEAWREIPDVSDEVSLPGESQSSSKEVATDGCYLPGSKTLHTISSGAPQVRKN 358
           RE MN+ +EAW+++PDVS+E S P  S +SS+E A+D  +  GSK      S A Q+ K 
Sbjct: 267 REVMNETIEAWKQVPDVSEEASPPPRSLASSREDASDKRHWSGSKNSCAAGSEATQMGKK 326

Query: 357 YSLANGSPARDGSSPATTLKRSPLDFSIKKTDPAMFRKLDHKKRPANWKVDIAAPS 190
             LA  +   DGS  AT  KRSPL  + KKT  AM+ K+D KK   +WKV+I+ P+
Sbjct: 327 SILAMRTTPPDGSLAATARKRSPLKSTEKKTSLAMYGKVDQKKL-VDWKVEISVPN 381


>emb|CBI15107.3| unnamed protein product [Vitis vinifera]
          Length = 521

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 56/116 (48%), Positives = 75/116 (64%)
 Frame = -1

Query: 540 VRETMNQMVEAWREIPDVSDEVSLPGESQSSSKEVATDGCYLPGSKTLHTISSGAPQVRK 361
           VR+TMNQM+ AW+EIPDVS++VS P +SQSSSKE A+DG Y   S+   T  S  P +RK
Sbjct: 152 VRDTMNQMLGAWKEIPDVSNDVSPPPQSQSSSKENASDGRYPLESRNSCTGGSEVPLMRK 211

Query: 360 NYSLANGSPARDGSSPATTLKRSPLDFSIKKTDPAMFRKLDHKKRPANWKVDIAAP 193
                + SP  + SS  T  +R P+D    K+  AMFRKL+ KK  ++ KV++ AP
Sbjct: 212 KSIPTSISPQLNSSSATTVRRRGPVD----KSGSAMFRKLERKK-ASDLKVEVTAP 262


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