BLASTX nr result

ID: Panax21_contig00000585 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000585
         (1116 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522846.1| Trafficking protein particle complex subunit...   105   3e-29
ref|XP_003638670.1| Trafficking protein particle complex subunit...   107   5e-29
ref|XP_002319811.1| predicted protein [Populus trichocarpa] gi|1...   104   9e-29
gb|AFK41630.1| unknown [Lotus japonicus]                              104   9e-29
ref|XP_003607683.1| Trafficking protein particle complex subunit...   105   1e-28

>ref|XP_002522846.1| Trafficking protein particle complex subunit, putative [Ricinus
           communis] gi|223537930|gb|EEF39544.1| Trafficking
           protein particle complex subunit, putative [Ricinus
           communis]
          Length = 186

 Score =  105 bits (263), Expect(2) = 3e-29
 Identities = 53/60 (88%), Positives = 55/60 (91%)
 Frame = -2

Query: 182 FHSTYGAIVRQFLTDLEEVEEVNKQLDQMGYNIGIWLIDEFLAKSNVSTCVDFRETAEVI 3
           F  TYGAIVRQ LTDLEEVEEVNKQLDQMGYNIGI L+DEFLAKSNV+ CVDFRETAEVI
Sbjct: 24  FTLTYGAIVRQLLTDLEEVEEVNKQLDQMGYNIGIRLVDEFLAKSNVNRCVDFRETAEVI 83



 Score = 50.1 bits (118), Expect(2) = 3e-29
 Identities = 23/26 (88%), Positives = 25/26 (96%)
 Frame = -3

Query: 250 MAPIAPRSGDAIFASVERVNSELFTL 173
           MAP+ PRSGDAIFASVERVN+ELFTL
Sbjct: 1   MAPVGPRSGDAIFASVERVNAELFTL 26


>ref|XP_003638670.1| Trafficking protein particle complex subunit [Medicago truncatula]
           gi|355504605|gb|AES85808.1| Trafficking protein particle
           complex subunit [Medicago truncatula]
           gi|388507760|gb|AFK41946.1| unknown [Medicago
           truncatula]
          Length = 186

 Score =  107 bits (266), Expect(2) = 5e-29
 Identities = 54/60 (90%), Positives = 56/60 (93%)
 Frame = -2

Query: 182 FHSTYGAIVRQFLTDLEEVEEVNKQLDQMGYNIGIWLIDEFLAKSNVSTCVDFRETAEVI 3
           F  TYGAIVRQ LTDLEEV+EVNKQLDQMGYNIGI LIDEFLAKSNVS+CVDFRETAEVI
Sbjct: 24  FTLTYGAIVRQLLTDLEEVDEVNKQLDQMGYNIGIRLIDEFLAKSNVSSCVDFRETAEVI 83



 Score = 48.1 bits (113), Expect(2) = 5e-29
 Identities = 21/26 (80%), Positives = 25/26 (96%)
 Frame = -3

Query: 250 MAPIAPRSGDAIFASVERVNSELFTL 173
           MAP+APRSGDAIFA++E VN+ELFTL
Sbjct: 1   MAPVAPRSGDAIFANIEHVNAELFTL 26


>ref|XP_002319811.1| predicted protein [Populus trichocarpa] gi|118484767|gb|ABK94252.1|
           unknown [Populus trichocarpa]
           gi|222858187|gb|EEE95734.1| predicted protein [Populus
           trichocarpa]
          Length = 186

 Score =  104 bits (260), Expect(2) = 9e-29
 Identities = 52/60 (86%), Positives = 55/60 (91%)
 Frame = -2

Query: 182 FHSTYGAIVRQFLTDLEEVEEVNKQLDQMGYNIGIWLIDEFLAKSNVSTCVDFRETAEVI 3
           F  TYGAIVRQ LTDLEEVEEVNKQLDQMGYNIG+ LIDEFLAKSNVS CVDF+ETA+VI
Sbjct: 24  FTLTYGAIVRQLLTDLEEVEEVNKQLDQMGYNIGVRLIDEFLAKSNVSRCVDFKETADVI 83



 Score = 49.7 bits (117), Expect(2) = 9e-29
 Identities = 23/26 (88%), Positives = 25/26 (96%)
 Frame = -3

Query: 250 MAPIAPRSGDAIFASVERVNSELFTL 173
           MAP+APRSGDAIFASVE VN+ELFTL
Sbjct: 1   MAPVAPRSGDAIFASVEHVNAELFTL 26


>gb|AFK41630.1| unknown [Lotus japonicus]
          Length = 186

 Score =  104 bits (259), Expect(2) = 9e-29
 Identities = 52/60 (86%), Positives = 54/60 (90%)
 Frame = -2

Query: 182 FHSTYGAIVRQFLTDLEEVEEVNKQLDQMGYNIGIWLIDEFLAKSNVSTCVDFRETAEVI 3
           F  TYGAIVRQ LTDLEEVEEVNKQLDQMGYNIGI L+DEFLAKSNVS CVDFRET +VI
Sbjct: 24  FTLTYGAIVRQLLTDLEEVEEVNKQLDQMGYNIGIRLVDEFLAKSNVSRCVDFRETTDVI 83



 Score = 50.1 bits (118), Expect(2) = 9e-29
 Identities = 22/26 (84%), Positives = 26/26 (100%)
 Frame = -3

Query: 250 MAPIAPRSGDAIFASVERVNSELFTL 173
           MAP+APRSGDAIFA++ERVN+ELFTL
Sbjct: 1   MAPVAPRSGDAIFANIERVNAELFTL 26


>ref|XP_003607683.1| Trafficking protein particle complex subunit [Medicago truncatula]
           gi|217075312|gb|ACJ86016.1| unknown [Medicago
           truncatula] gi|355508738|gb|AES89880.1| Trafficking
           protein particle complex subunit [Medicago truncatula]
           gi|388499948|gb|AFK38040.1| unknown [Medicago
           truncatula]
          Length = 186

 Score =  105 bits (261), Expect(2) = 1e-28
 Identities = 53/60 (88%), Positives = 55/60 (91%)
 Frame = -2

Query: 182 FHSTYGAIVRQFLTDLEEVEEVNKQLDQMGYNIGIWLIDEFLAKSNVSTCVDFRETAEVI 3
           F  TYGAIVRQ LTDLEEV+EVNKQLDQMGYNIGI LIDEFLAKSNVS CVDFRETA+VI
Sbjct: 24  FTLTYGAIVRQLLTDLEEVDEVNKQLDQMGYNIGIRLIDEFLAKSNVSRCVDFRETADVI 83



 Score = 48.9 bits (115), Expect(2) = 1e-28
 Identities = 21/26 (80%), Positives = 26/26 (100%)
 Frame = -3

Query: 250 MAPIAPRSGDAIFASVERVNSELFTL 173
           MAP+APR+GDAIFA++ERVN+ELFTL
Sbjct: 1   MAPVAPRTGDAIFANIERVNAELFTL 26