BLASTX nr result

ID: Panax21_contig00000584 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000584
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522846.1| Trafficking protein particle complex subunit...   159   3e-37
ref|XP_003638670.1| Trafficking protein particle complex subunit...   158   5e-37
gb|AFK41630.1| unknown [Lotus japonicus]                              157   9e-37
ref|XP_002319811.1| predicted protein [Populus trichocarpa] gi|1...   157   9e-37
ref|XP_003607683.1| Trafficking protein particle complex subunit...   157   1e-36

>ref|XP_002522846.1| Trafficking protein particle complex subunit, putative [Ricinus
           communis] gi|223537930|gb|EEF39544.1| Trafficking
           protein particle complex subunit, putative [Ricinus
           communis]
          Length = 186

 Score =  159 bits (401), Expect = 3e-37
 Identities = 80/85 (94%), Positives = 83/85 (97%)
 Frame = -2

Query: 256 MAPVAPRSGDAIFASVERVNSELFTLTYGAIVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 77
           MAPV PRSGDAIFASVERVN+ELFTLTYGAIVRQLLTDLEEVEEVNKQLDQMGYNIGIRL
Sbjct: 1   MAPVGPRSGDAIFASVERVNAELFTLTYGAIVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60

Query: 76  IDEFLAKSNVSTCVDFRETAEVIAK 2
           +DEFLAKSNV+ CVDFRETAEVIAK
Sbjct: 61  VDEFLAKSNVNRCVDFRETAEVIAK 85


>ref|XP_003638670.1| Trafficking protein particle complex subunit [Medicago truncatula]
           gi|355504605|gb|AES85808.1| Trafficking protein particle
           complex subunit [Medicago truncatula]
           gi|388507760|gb|AFK41946.1| unknown [Medicago
           truncatula]
          Length = 186

 Score =  158 bits (399), Expect = 5e-37
 Identities = 79/85 (92%), Positives = 84/85 (98%)
 Frame = -2

Query: 256 MAPVAPRSGDAIFASVERVNSELFTLTYGAIVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 77
           MAPVAPRSGDAIFA++E VN+ELFTLTYGAIVRQLLTDLEEV+EVNKQLDQMGYNIGIRL
Sbjct: 1   MAPVAPRSGDAIFANIEHVNAELFTLTYGAIVRQLLTDLEEVDEVNKQLDQMGYNIGIRL 60

Query: 76  IDEFLAKSNVSTCVDFRETAEVIAK 2
           IDEFLAKSNVS+CVDFRETAEVIAK
Sbjct: 61  IDEFLAKSNVSSCVDFRETAEVIAK 85


>gb|AFK41630.1| unknown [Lotus japonicus]
          Length = 186

 Score =  157 bits (397), Expect = 9e-37
 Identities = 78/85 (91%), Positives = 83/85 (97%)
 Frame = -2

Query: 256 MAPVAPRSGDAIFASVERVNSELFTLTYGAIVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 77
           MAPVAPRSGDAIFA++ERVN+ELFTLTYGAIVRQLLTDLEEVEEVNKQLDQMGYNIGIRL
Sbjct: 1   MAPVAPRSGDAIFANIERVNAELFTLTYGAIVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60

Query: 76  IDEFLAKSNVSTCVDFRETAEVIAK 2
           +DEFLAKSNVS CVDFRET +VIAK
Sbjct: 61  VDEFLAKSNVSRCVDFRETTDVIAK 85


>ref|XP_002319811.1| predicted protein [Populus trichocarpa] gi|118484767|gb|ABK94252.1|
           unknown [Populus trichocarpa]
           gi|222858187|gb|EEE95734.1| predicted protein [Populus
           trichocarpa]
          Length = 186

 Score =  157 bits (397), Expect = 9e-37
 Identities = 79/85 (92%), Positives = 83/85 (97%)
 Frame = -2

Query: 256 MAPVAPRSGDAIFASVERVNSELFTLTYGAIVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 77
           MAPVAPRSGDAIFASVE VN+ELFTLTYGAIVRQLLTDLEEVEEVNKQLDQMGYNIG+RL
Sbjct: 1   MAPVAPRSGDAIFASVEHVNAELFTLTYGAIVRQLLTDLEEVEEVNKQLDQMGYNIGVRL 60

Query: 76  IDEFLAKSNVSTCVDFRETAEVIAK 2
           IDEFLAKSNVS CVDF+ETA+VIAK
Sbjct: 61  IDEFLAKSNVSRCVDFKETADVIAK 85


>ref|XP_003607683.1| Trafficking protein particle complex subunit [Medicago truncatula]
           gi|217075312|gb|ACJ86016.1| unknown [Medicago
           truncatula] gi|355508738|gb|AES89880.1| Trafficking
           protein particle complex subunit [Medicago truncatula]
           gi|388499948|gb|AFK38040.1| unknown [Medicago
           truncatula]
          Length = 186

 Score =  157 bits (396), Expect = 1e-36
 Identities = 78/85 (91%), Positives = 84/85 (98%)
 Frame = -2

Query: 256 MAPVAPRSGDAIFASVERVNSELFTLTYGAIVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 77
           MAPVAPR+GDAIFA++ERVN+ELFTLTYGAIVRQLLTDLEEV+EVNKQLDQMGYNIGIRL
Sbjct: 1   MAPVAPRTGDAIFANIERVNAELFTLTYGAIVRQLLTDLEEVDEVNKQLDQMGYNIGIRL 60

Query: 76  IDEFLAKSNVSTCVDFRETAEVIAK 2
           IDEFLAKSNVS CVDFRETA+VIAK
Sbjct: 61  IDEFLAKSNVSRCVDFRETADVIAK 85


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