BLASTX nr result

ID: Panax21_contig00000583 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000583
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281399.1| PREDICTED: trafficking protein particle comp...   204   5e-51
ref|XP_002319811.1| predicted protein [Populus trichocarpa] gi|1...   202   3e-50
ref|XP_002522846.1| Trafficking protein particle complex subunit...   200   9e-50
gb|AFK41630.1| unknown [Lotus japonicus]                              200   1e-49
ref|XP_004158487.1| PREDICTED: trafficking protein particle comp...   196   2e-48

>ref|XP_002281399.1| PREDICTED: trafficking protein particle complex subunit 3 [Vitis
           vinifera] gi|147765421|emb|CAN64900.1| hypothetical
           protein VITISV_041653 [Vitis vinifera]
           gi|297735985|emb|CBI23959.3| unnamed protein product
           [Vitis vinifera]
          Length = 186

 Score =  204 bits (520), Expect = 5e-51
 Identities = 96/101 (95%), Positives = 100/101 (99%)
 Frame = -3

Query: 505 VGFKMFLGVTASVTNWDAEGTRCSLILEDNPLVDFVELPDTCQGLYYCNILSGVVRGALE 326
           VGFKMFLGVTASVTNWDA+GT CSL+LEDNPLVDFVELPDTCQGLYYCNILSGVVRGALE
Sbjct: 86  VGFKMFLGVTASVTNWDADGTSCSLVLEDNPLVDFVELPDTCQGLYYCNILSGVVRGALE 145

Query: 325 MVSMKTEVTWVRDMLRGDDAFELQVKLLKQVPEEYPYKDDE 203
           MVSMKTEVTW+RDMLRGDDA+ELQVKLLKQVPEEYPYKDDE
Sbjct: 146 MVSMKTEVTWIRDMLRGDDAYELQVKLLKQVPEEYPYKDDE 186


>ref|XP_002319811.1| predicted protein [Populus trichocarpa] gi|118484767|gb|ABK94252.1|
           unknown [Populus trichocarpa]
           gi|222858187|gb|EEE95734.1| predicted protein [Populus
           trichocarpa]
          Length = 186

 Score =  202 bits (513), Expect = 3e-50
 Identities = 96/101 (95%), Positives = 99/101 (98%)
 Frame = -3

Query: 505 VGFKMFLGVTASVTNWDAEGTRCSLILEDNPLVDFVELPDTCQGLYYCNILSGVVRGALE 326
           VGFKMFLGV ASVTNWDA+GT CS++LEDNPLVDFVELPDTCQGLYYCNILSGVVRGALE
Sbjct: 86  VGFKMFLGVGASVTNWDADGTCCSIVLEDNPLVDFVELPDTCQGLYYCNILSGVVRGALE 145

Query: 325 MVSMKTEVTWVRDMLRGDDAFELQVKLLKQVPEEYPYKDDE 203
           MVSMKTEVTWVRDMLRGDDAFELQVKLLKQVPEEYPYKDDE
Sbjct: 146 MVSMKTEVTWVRDMLRGDDAFELQVKLLKQVPEEYPYKDDE 186


>ref|XP_002522846.1| Trafficking protein particle complex subunit, putative [Ricinus
           communis] gi|223537930|gb|EEF39544.1| Trafficking
           protein particle complex subunit, putative [Ricinus
           communis]
          Length = 186

 Score =  200 bits (509), Expect = 9e-50
 Identities = 94/101 (93%), Positives = 99/101 (98%)
 Frame = -3

Query: 505 VGFKMFLGVTASVTNWDAEGTRCSLILEDNPLVDFVELPDTCQGLYYCNILSGVVRGALE 326
           VGFKMFLGV+ASVTNWDA+GT CS+ILEDNPLVDFVELPDTCQGLYYCNILSGV+RGALE
Sbjct: 86  VGFKMFLGVSASVTNWDADGTCCSIILEDNPLVDFVELPDTCQGLYYCNILSGVIRGALE 145

Query: 325 MVSMKTEVTWVRDMLRGDDAFELQVKLLKQVPEEYPYKDDE 203
           MVSMKTEVTW RDMLRGDDA+ELQVKLLKQVPEEYPYKDDE
Sbjct: 146 MVSMKTEVTWARDMLRGDDAYELQVKLLKQVPEEYPYKDDE 186


>gb|AFK41630.1| unknown [Lotus japonicus]
          Length = 186

 Score =  200 bits (508), Expect = 1e-49
 Identities = 93/101 (92%), Positives = 99/101 (98%)
 Frame = -3

Query: 505 VGFKMFLGVTASVTNWDAEGTRCSLILEDNPLVDFVELPDTCQGLYYCNILSGVVRGALE 326
           VGFKMFLGVTASVTNWDAEGT CS++LEDNPLVDFVELPDTCQGLYYCNILSGV+RGAL+
Sbjct: 86  VGFKMFLGVTASVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQGLYYCNILSGVIRGALD 145

Query: 325 MVSMKTEVTWVRDMLRGDDAFELQVKLLKQVPEEYPYKDDE 203
           MVSMKTEVTW+RD+LRGDD FELQVKLLKQVPEEYPYKDDE
Sbjct: 146 MVSMKTEVTWLRDVLRGDDVFELQVKLLKQVPEEYPYKDDE 186


>ref|XP_004158487.1| PREDICTED: trafficking protein particle complex subunit 3-like
           [Cucumis sativus]
          Length = 106

 Score =  196 bits (497), Expect = 2e-48
 Identities = 91/101 (90%), Positives = 98/101 (97%)
 Frame = -3

Query: 505 VGFKMFLGVTASVTNWDAEGTRCSLILEDNPLVDFVELPDTCQGLYYCNILSGVVRGALE 326
           VG KMFLGV A+VTNWDAEGT CS++LEDNPLVDFVELPDTCQGL+YCNILSGV+RGALE
Sbjct: 6   VGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALE 65

Query: 325 MVSMKTEVTWVRDMLRGDDAFELQVKLLKQVPEEYPYKDDE 203
           MVSMKTEVTW+RDMLRGDD+FELQVKLLKQVPEEYPYKDDE
Sbjct: 66  MVSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEYPYKDDE 106


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