BLASTX nr result
ID: Panax21_contig00000575
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00000575
(548 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276156.1| PREDICTED: F-box protein SKIP22 [Vitis vinif... 128 2e-39
emb|CBI25128.3| unnamed protein product [Vitis vinifera] 128 2e-39
gb|ADN33816.1| F-box family protein [Cucumis melo subsp. melo] 109 3e-32
ref|XP_004156873.1| PREDICTED: F-box protein SKIP22-like [Cucumi... 109 3e-31
ref|XP_004150266.1| PREDICTED: F-box protein SKIP22-like [Cucumi... 108 6e-31
>ref|XP_002276156.1| PREDICTED: F-box protein SKIP22 [Vitis vinifera]
gi|147804806|emb|CAN73524.1| hypothetical protein
VITISV_010705 [Vitis vinifera]
Length = 563
Score = 128 bits (322), Expect(2) = 2e-39
Identities = 67/130 (51%), Positives = 84/130 (64%), Gaps = 2/130 (1%)
Frame = +1
Query: 1 YTLPEIIGHDSVKGDGVNTVVLKFQSIGKFFNVYGSLSTGSGT-HWVRVNEDRLVPFLNV 177
YTLPE++ H + +V LKFQ +G+F N+YGSLS T HWV ++E R P L++
Sbjct: 298 YTLPELLDHGCDDSPAIQSVALKFQHLGQFINIYGSLSGNRSTVHWVSLDEYRFAPTLDL 357
Query: 178 IWANCGSVTETIGNDEAFSTS-PAREVFAFWRTVKDRLALPLLTDLCEKAGLDLPPCFM* 354
+W + S E D S S P EVF FW+ VKD LALPLLTDLCEK GL PPC M
Sbjct: 358 MWTHSDSAEE---KDRGSSNSYPENEVFEFWKIVKDGLALPLLTDLCEKGGLLPPPCLMR 414
Query: 355 LPTDIKLQIL 384
LPT++KL+IL
Sbjct: 415 LPTELKLKIL 424
Score = 59.3 bits (142), Expect(2) = 2e-39
Identities = 25/32 (78%), Positives = 29/32 (90%)
Frame = +2
Query: 389 LPGVDVAKVGCVCSELRYLTSSDDLWKQKFVE 484
LPGVD+ KVGCVCSEL YL+S++DLWKQKF E
Sbjct: 427 LPGVDLGKVGCVCSELMYLSSNNDLWKQKFTE 458
>emb|CBI25128.3| unnamed protein product [Vitis vinifera]
Length = 508
Score = 128 bits (322), Expect(2) = 2e-39
Identities = 67/130 (51%), Positives = 84/130 (64%), Gaps = 2/130 (1%)
Frame = +1
Query: 1 YTLPEIIGHDSVKGDGVNTVVLKFQSIGKFFNVYGSLSTGSGT-HWVRVNEDRLVPFLNV 177
YTLPE++ H + +V LKFQ +G+F N+YGSLS T HWV ++E R P L++
Sbjct: 236 YTLPELLDHGCDDSPAIQSVALKFQHLGQFINIYGSLSGNRSTVHWVSLDEYRFAPTLDL 295
Query: 178 IWANCGSVTETIGNDEAFSTS-PAREVFAFWRTVKDRLALPLLTDLCEKAGLDLPPCFM* 354
+W + S E D S S P EVF FW+ VKD LALPLLTDLCEK GL PPC M
Sbjct: 296 MWTHSDSAEE---KDRGSSNSYPENEVFEFWKIVKDGLALPLLTDLCEKGGLLPPPCLMR 352
Query: 355 LPTDIKLQIL 384
LPT++KL+IL
Sbjct: 353 LPTELKLKIL 362
Score = 59.3 bits (142), Expect(2) = 2e-39
Identities = 25/32 (78%), Positives = 29/32 (90%)
Frame = +2
Query: 389 LPGVDVAKVGCVCSELRYLTSSDDLWKQKFVE 484
LPGVD+ KVGCVCSEL YL+S++DLWKQKF E
Sbjct: 365 LPGVDLGKVGCVCSELMYLSSNNDLWKQKFTE 396
>gb|ADN33816.1| F-box family protein [Cucumis melo subsp. melo]
Length = 502
Score = 109 bits (272), Expect(2) = 3e-32
Identities = 61/130 (46%), Positives = 83/130 (63%), Gaps = 2/130 (1%)
Frame = +1
Query: 1 YTLPEIIGHDSVKGDGVNTVVLKFQSIGKFFNVYGSL--STGSGTHWVRVNEDRLVPFLN 174
YTLPE++ V+LKFQS+G F NVYGSL S GS + V ++E + P L+
Sbjct: 246 YTLPELLTKRGKNSTMTEVVLLKFQSLGYFVNVYGSLNCSRGSSVYRVSLDERKFAPNLD 305
Query: 175 VIWANCGSVTETIGNDEAFSTSPAREVFAFWRTVKDRLALPLLTDLCEKAGLDLPPCFM* 354
+IW + SV+ I +++ +P ++VF FW+ VKD LALPLL D+CEK GL P FM
Sbjct: 306 LIWVD--SVSNYIMDEK--EGNPEKQVFEFWKIVKDALALPLLIDICEKTGLPPPASFML 361
Query: 355 LPTDIKLQIL 384
LP D+KL+IL
Sbjct: 362 LPADVKLKIL 371
Score = 54.3 bits (129), Expect(2) = 3e-32
Identities = 24/37 (64%), Positives = 30/37 (81%)
Frame = +2
Query: 389 LPGVDVAKVGCVCSELRYLTSSDDLWKQKFVETNFGI 499
LPGVD+A+V CVC+ELRYL SS++LWK KF FG+
Sbjct: 374 LPGVDIARVECVCTELRYLASSNELWKMKF-NQEFGL 409
>ref|XP_004156873.1| PREDICTED: F-box protein SKIP22-like [Cucumis sativus]
Length = 499
Score = 109 bits (272), Expect(2) = 3e-31
Identities = 61/130 (46%), Positives = 83/130 (63%), Gaps = 2/130 (1%)
Frame = +1
Query: 1 YTLPEIIGHDSVKGDGVNTVVLKFQSIGKFFNVYGSLS--TGSGTHWVRVNEDRLVPFLN 174
YTLPE++ V+LKFQS+G F NVYGSLS GS + V ++E + P L+
Sbjct: 243 YTLPELLTKREKNSTMTEVVLLKFQSLGYFVNVYGSLSYSRGSSVYRVSLDERKFAPNLD 302
Query: 175 VIWANCGSVTETIGNDEAFSTSPAREVFAFWRTVKDRLALPLLTDLCEKAGLDLPPCFM* 354
+IW + SV+ I +++ +P ++VF FW+ VKD LALPLL D+CEK GL P FM
Sbjct: 303 LIWVD--SVSNYIMDEK--EGNPEKQVFEFWKIVKDALALPLLIDICEKTGLPPPASFML 358
Query: 355 LPTDIKLQIL 384
LP D+KL+IL
Sbjct: 359 LPADVKLKIL 368
Score = 51.2 bits (121), Expect(2) = 3e-31
Identities = 23/37 (62%), Positives = 29/37 (78%)
Frame = +2
Query: 389 LPGVDVAKVGCVCSELRYLTSSDDLWKQKFVETNFGI 499
L GVD+A+V CVC+ELRYL SS++LWK KF FG+
Sbjct: 371 LTGVDIARVECVCTELRYLASSNELWKMKF-NQEFGL 406
>ref|XP_004150266.1| PREDICTED: F-box protein SKIP22-like [Cucumis sativus]
Length = 499
Score = 108 bits (269), Expect(2) = 6e-31
Identities = 60/130 (46%), Positives = 83/130 (63%), Gaps = 2/130 (1%)
Frame = +1
Query: 1 YTLPEIIGHDSVKGDGVNTVVLKFQSIGKFFNVYGSLS--TGSGTHWVRVNEDRLVPFLN 174
YT+PE++ V+LKFQS+G F NVYGSLS GS + V ++E + P L+
Sbjct: 243 YTIPELLTKREKNSTMTEVVLLKFQSLGYFVNVYGSLSYSRGSSVYRVSLDERKFAPNLD 302
Query: 175 VIWANCGSVTETIGNDEAFSTSPAREVFAFWRTVKDRLALPLLTDLCEKAGLDLPPCFM* 354
+IW + SV+ I +++ +P ++VF FW+ VKD LALPLL D+CEK GL P FM
Sbjct: 303 LIWVD--SVSNYILDEK--EGNPEKQVFEFWKIVKDALALPLLIDICEKTGLPPPASFML 358
Query: 355 LPTDIKLQIL 384
LP D+KL+IL
Sbjct: 359 LPADVKLKIL 368
Score = 51.2 bits (121), Expect(2) = 6e-31
Identities = 23/37 (62%), Positives = 29/37 (78%)
Frame = +2
Query: 389 LPGVDVAKVGCVCSELRYLTSSDDLWKQKFVETNFGI 499
L GVD+A+V CVC+ELRYL SS++LWK KF FG+
Sbjct: 371 LTGVDIARVECVCTELRYLASSNELWKMKF-NQEFGL 406