BLASTX nr result

ID: Panax21_contig00000572 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000572
         (678 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_849428.1| Rossmann-fold NAD(P)-binding domain-containing ...   297   1e-78
ref|XP_002270104.1| PREDICTED: short-chain dehydrogenase TIC 32,...   295   4e-78
dbj|BAE99458.1| hypothetical protein [Arabidopsis thaliana]           295   4e-78
ref|XP_002869780.1| short-chain dehydrogenase/reductase family p...   294   1e-77
ref|XP_002321927.1| predicted protein [Populus trichocarpa] gi|2...   294   1e-77

>ref|NP_849428.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis
           thaliana] gi|353678136|sp|A2RVM0.1|TIC32_ARATH RecName:
           Full=Short-chain dehydrogenase TIC 32, chloroplastic;
           AltName: Full=Translocon at the inner envelope membrane
           of chloroplasts 32; Short=AtTIC32
           gi|124300994|gb|ABN04749.1| At4g23430 [Arabidopsis
           thaliana] gi|332659354|gb|AEE84754.1| Rossmann-fold
           NAD(P)-binding domain-containing protein [Arabidopsis
           thaliana]
          Length = 322

 Score =  297 bits (760), Expect = 1e-78
 Identities = 146/227 (64%), Positives = 189/227 (83%), Gaps = 2/227 (0%)
 Frame = -3

Query: 676 GASNGIGKETARVLALRGVHVIMGVRNVKAGEQVKQELLQKIPSAKLDVMEIDLNTMISI 497
           GAS+GIG ETARVL+LRGVHV+M VRN  +G +VK+++++++P AKLDVME+DL++M S+
Sbjct: 36  GASSGIGVETARVLSLRGVHVVMAVRNTDSGAKVKEDIVKQVPGAKLDVMELDLSSMQSV 95

Query: 496 RKFAAEFIATGLPLNILVNNAGIMSPPFTLSKDNIEQQFAVNHLGPFLLTNLLLDTIKNT 317
           RKFA+E+ +TGLPLN+L+NNAGIM+ PF LSKDNIE QFA NHLG FLLT LLLDT+K+T
Sbjct: 96  RKFASEYKSTGLPLNLLINNAGIMACPFMLSKDNIELQFATNHLGHFLLTKLLLDTMKST 155

Query: 316 ARESGKEGRIVNIGSELHKYGYKEGIRFDKINDKASYNPNSAYGQSKLCNTLHCVELTRR 137
           +RES +EGRIVN+ SE H++ Y EG+RFDKINDK+SY+   AYGQSKLCN LH  ELT++
Sbjct: 156 SRESKREGRIVNLSSEAHRFSYPEGVRFDKINDKSSYSSMRAYGQSKLCNVLHANELTKQ 215

Query: 136 FKEEGVNVTANSLHPGLIATNIGQN-SSALGFVLGA-TQYLLKNVSQ 2
            KE+GVN+TANSLHPG I TN+G+  +  L   +GA  +Y+LK+V Q
Sbjct: 216 LKEDGVNITANSLHPGAIMTNLGRYFNPYLAVAVGAVAKYILKSVPQ 262


>ref|XP_002270104.1| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Vitis
           vinifera] gi|302143828|emb|CBI22689.3| unnamed protein
           product [Vitis vinifera]
          Length = 313

 Score =  295 bits (756), Expect = 4e-78
 Identities = 147/226 (65%), Positives = 185/226 (81%), Gaps = 1/226 (0%)
 Frame = -3

Query: 676 GASNGIGKETARVLALRGVHVIMGVRNVKAGEQVKQELLQKIPSAKLDVMEIDLNTMISI 497
           GAS+GIG ET RVLALRGVHV+MGVRN+ AG++VK+ ++++IP+AK+D ME+DL++M S+
Sbjct: 36  GASSGIGTETTRVLALRGVHVVMGVRNMSAGKEVKEAIVKEIPTAKVDAMELDLSSMASV 95

Query: 496 RKFAAEFIATGLPLNILVNNAGIMSPPFTLSKDNIEQQFAVNHLGPFLLTNLLLDTIKNT 317
           RKFA+E+ ++GLPLNIL+NNAGIM+ P+ LSKDNIE QFA NHLG FLLTNLLLDT+K T
Sbjct: 96  RKFASEYNSSGLPLNILINNAGIMAVPYMLSKDNIEMQFATNHLGHFLLTNLLLDTMKKT 155

Query: 316 ARESGKEGRIVNIGSELHKYGYKEGIRFDKINDKASYNPNSAYGQSKLCNTLHCVELTRR 137
            R+S KEGRIVN+ S  H+Y Y+EGIRFDKINDK+ Y+   AYGQSKL N LH  EL RR
Sbjct: 156 TRKSRKEGRIVNVSSMAHRYPYREGIRFDKINDKSGYSSLFAYGQSKLANVLHANELARR 215

Query: 136 FKEEGVNVTANSLHPGLIATNIGQNSSAL-GFVLGATQYLLKNVSQ 2
           FKE+GV++TANSLHPG I TN+ + SS + G V    + +LKNV Q
Sbjct: 216 FKEDGVDITANSLHPGAIVTNLFRCSSIVSGLVNTVGKLVLKNVQQ 261


>dbj|BAE99458.1| hypothetical protein [Arabidopsis thaliana]
          Length = 322

 Score =  295 bits (756), Expect = 4e-78
 Identities = 145/227 (63%), Positives = 189/227 (83%), Gaps = 2/227 (0%)
 Frame = -3

Query: 676 GASNGIGKETARVLALRGVHVIMGVRNVKAGEQVKQELLQKIPSAKLDVMEIDLNTMISI 497
           GAS+GIG ETARVL+LRGVHV+M VRN  +G +VK+++++++P AKLDVME+DL++M S+
Sbjct: 36  GASSGIGVETARVLSLRGVHVVMAVRNTDSGAKVKEDIVKQVPGAKLDVMELDLSSMQSV 95

Query: 496 RKFAAEFIATGLPLNILVNNAGIMSPPFTLSKDNIEQQFAVNHLGPFLLTNLLLDTIKNT 317
           RKFA+E+ +TGLPLN+L+NNAGIM+ PF LSKDNIE QFA NHLG FLLT LLLDT+K+T
Sbjct: 96  RKFASEYKSTGLPLNLLINNAGIMACPFMLSKDNIELQFATNHLGHFLLTKLLLDTMKST 155

Query: 316 ARESGKEGRIVNIGSELHKYGYKEGIRFDKINDKASYNPNSAYGQSKLCNTLHCVELTRR 137
           +RES +EGRIVN+ SE H++ Y EG+RFDKINDK+SY+   AYGQSKLCN LH  ELT++
Sbjct: 156 SRESKREGRIVNLSSEAHRFSYPEGVRFDKINDKSSYSSMRAYGQSKLCNVLHANELTKQ 215

Query: 136 FKEEGVNVTANSLHPGLIATNIGQN-SSALGFVLGA-TQYLLKNVSQ 2
            +E+GVN+TANSLHPG I TN+G+  +  L   +GA  +Y+LK+V Q
Sbjct: 216 LEEDGVNITANSLHPGAIMTNLGRYFNPYLAVAVGAVAKYILKSVPQ 262


>ref|XP_002869780.1| short-chain dehydrogenase/reductase family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297315616|gb|EFH46039.1|
           short-chain dehydrogenase/reductase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 322

 Score =  294 bits (752), Expect = 1e-77
 Identities = 144/227 (63%), Positives = 184/227 (81%), Gaps = 2/227 (0%)
 Frame = -3

Query: 676 GASNGIGKETARVLALRGVHVIMGVRNVKAGEQVKQELLQKIPSAKLDVMEIDLNTMISI 497
           GAS+GIG ETARVL+LRGVHV+M VRN  +G +VK+++++++P AKLDVME+DL++M S+
Sbjct: 36  GASSGIGVETARVLSLRGVHVVMAVRNTGSGAKVKEDIVKQVPGAKLDVMELDLSSMESV 95

Query: 496 RKFAAEFIATGLPLNILVNNAGIMSPPFTLSKDNIEQQFAVNHLGPFLLTNLLLDTIKNT 317
           RKFA+E+ + GLPLN+L+NNAGIM+ PF LSKDNIE QFA NHLG FLLT LLLDT+KNT
Sbjct: 96  RKFASEYKSAGLPLNLLINNAGIMACPFMLSKDNIELQFATNHLGHFLLTKLLLDTMKNT 155

Query: 316 ARESGKEGRIVNIGSELHKYGYKEGIRFDKINDKASYNPNSAYGQSKLCNTLHCVELTRR 137
           +RES +EGRIVN+ SE H + Y EG+RFDKINDK+SY+   AYGQSKLCN LH  EL ++
Sbjct: 156 SRESKREGRIVNLSSEAHWFSYPEGVRFDKINDKSSYSSMRAYGQSKLCNVLHANELAKQ 215

Query: 136 FKEEGVNVTANSLHPGLIATNIGQ--NSSALGFVLGATQYLLKNVSQ 2
            KE+GVN+TANS+HPG I TN+G+  N    G V    +Y+LK+V Q
Sbjct: 216 LKEDGVNITANSVHPGAIMTNLGRYFNPYLAGAVGAVAKYILKSVPQ 262


>ref|XP_002321927.1| predicted protein [Populus trichocarpa] gi|222868923|gb|EEF06054.1|
           predicted protein [Populus trichocarpa]
          Length = 319

 Score =  294 bits (752), Expect = 1e-77
 Identities = 145/232 (62%), Positives = 186/232 (80%), Gaps = 7/232 (3%)
 Frame = -3

Query: 676 GASNGIGKETARVLALRGVHVIMGVRNVKAGEQVKQELLQKIPSAKLDVMEIDLNTMISI 497
           GAS+GIG ETARVLALRGVHVIMGVRN+ AG  VK+ ++++IPSAK+D ME+DL+++ S+
Sbjct: 36  GASSGIGTETARVLALRGVHVIMGVRNMAAGRDVKEAIVKEIPSAKVDAMELDLSSLASV 95

Query: 496 RKFAAEFIATGLPLNILVNNAGIMSPPFTLSKDNIEQQFAVNHLGPFLLTNLLLDTIKNT 317
           R FA++F ++G PLN+L+NNAGIM+PPF LSKDN+E QFA N+LG FLL NLLLDT+K T
Sbjct: 96  RNFASDFNSSGHPLNLLINNAGIMAPPFMLSKDNMELQFATNYLGHFLLANLLLDTMKKT 155

Query: 316 ARESGKEGRIVNIGSELHKYGYKEGIRFDKINDKASYNPNSAYGQSKLCNTLHCVELTRR 137
           A ES +EGRI+N+ SE H+Y Y EGIRFDKIND++ Y    AYGQSKL N LH  EL RR
Sbjct: 156 ALESNREGRIINVSSEFHRYPYPEGIRFDKINDQSGYKKFQAYGQSKLANVLHANELMRR 215

Query: 136 FKEEGVNVTANSLHPGLIATNIGQNSSALG-------FVLGATQYLLKNVSQ 2
           FKE+GVN+TANSLHPG+IATN+ +++++L        F+  A + +LKNV Q
Sbjct: 216 FKEDGVNITANSLHPGVIATNLFRHNTSLADDNPIRVFLESAARLVLKNVQQ 267


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