BLASTX nr result

ID: Panax21_contig00000566 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000566
         (878 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320061.1| predicted protein [Populus trichocarpa] gi|2...   251   2e-64
ref|XP_002301292.1| predicted protein [Populus trichocarpa] gi|2...   248   1e-63
ref|XP_002279016.1| PREDICTED: transducin beta-like protein 2 [V...   246   7e-63
emb|CAN82889.1| hypothetical protein VITISV_014050 [Vitis vinifera]   246   7e-63
ref|XP_002511720.1| nucleotide binding protein, putative [Ricinu...   241   2e-61

>ref|XP_002320061.1| predicted protein [Populus trichocarpa] gi|222860834|gb|EEE98376.1|
           predicted protein [Populus trichocarpa]
          Length = 451

 Score =  251 bits (640), Expect = 2e-64
 Identities = 117/141 (82%), Positives = 129/141 (91%)
 Frame = -3

Query: 876 SAVTWLCFTHDSEQIITSSKDGSMRIWNINVRYHLDEDPKTLKVFPIPLHDSNGTTLHYD 697
           SAVTWLCFT DSEQIIT+SKDGS+RIWNINVRYHLDEDPKTLKVFPIPLHDSNG TLHYD
Sbjct: 311 SAVTWLCFTPDSEQIITASKDGSIRIWNINVRYHLDEDPKTLKVFPIPLHDSNGGTLHYD 370

Query: 696 RLSISPDGKILAATHGPLLQWLCAETGQVLDTADKAHDGDITDLAWAPRIIPMGDKQSMI 517
           RLS+SPDG+IL ATHG +LQWLC ETG+VLDTAD+AHDGDIT +AWAP+ IP GD Q+ I
Sbjct: 371 RLSLSPDGRILVATHGSMLQWLCVETGKVLDTADRAHDGDITWIAWAPKPIPTGDGQTSI 430

Query: 516 LATSSVDKKVKLWAAPPLHQS 454
           LAT+SVDKKVKLWAAPPL  +
Sbjct: 431 LATASVDKKVKLWAAPPLRSA 451


>ref|XP_002301292.1| predicted protein [Populus trichocarpa] gi|222843018|gb|EEE80565.1|
           predicted protein [Populus trichocarpa]
          Length = 438

 Score =  248 bits (634), Expect = 1e-63
 Identities = 115/138 (83%), Positives = 128/138 (92%)
 Frame = -3

Query: 876 SAVTWLCFTHDSEQIITSSKDGSMRIWNINVRYHLDEDPKTLKVFPIPLHDSNGTTLHYD 697
           SAVTWLCFT DSEQIIT+SKDGS+RIWNINVRYHLDEDPKTLKVFPIPLHDSNG TLHYD
Sbjct: 299 SAVTWLCFTPDSEQIITASKDGSIRIWNINVRYHLDEDPKTLKVFPIPLHDSNGATLHYD 358

Query: 696 RLSISPDGKILAATHGPLLQWLCAETGQVLDTADKAHDGDITDLAWAPRIIPMGDKQSMI 517
           RLS+SPDG+ILAATHG +LQWLC ETG+VLDTAD AH+GDIT +AWAP+ +P GD +S +
Sbjct: 359 RLSLSPDGRILAATHGSMLQWLCVETGKVLDTADNAHNGDITWIAWAPKPMPAGDGRSFV 418

Query: 516 LATSSVDKKVKLWAAPPL 463
           LAT+SVDKKVKLWAAPPL
Sbjct: 419 LATASVDKKVKLWAAPPL 436


>ref|XP_002279016.1| PREDICTED: transducin beta-like protein 2 [Vitis vinifera]
          Length = 439

 Score =  246 bits (627), Expect = 7e-63
 Identities = 115/138 (83%), Positives = 128/138 (92%)
 Frame = -3

Query: 876 SAVTWLCFTHDSEQIITSSKDGSMRIWNINVRYHLDEDPKTLKVFPIPLHDSNGTTLHYD 697
           SAVTWLCFT +SEQIIT+SKDGS+R WNINVRYHLDEDPKTLKVFPIPLHDS+G+TL YD
Sbjct: 299 SAVTWLCFTPNSEQIITASKDGSIRTWNINVRYHLDEDPKTLKVFPIPLHDSSGSTLLYD 358

Query: 696 RLSISPDGKILAATHGPLLQWLCAETGQVLDTADKAHDGDITDLAWAPRIIPMGDKQSMI 517
           RLSISPDGKILAATHG  LQWLC ETG+VLDTADKAHDGDIT +AWAP  +P+GD++S++
Sbjct: 359 RLSISPDGKILAATHGSTLQWLCTETGKVLDTADKAHDGDITCIAWAPEHLPIGDQKSLV 418

Query: 516 LATSSVDKKVKLWAAPPL 463
           LATSSVDKKVKLW APPL
Sbjct: 419 LATSSVDKKVKLWVAPPL 436


>emb|CAN82889.1| hypothetical protein VITISV_014050 [Vitis vinifera]
          Length = 187

 Score =  246 bits (627), Expect = 7e-63
 Identities = 115/138 (83%), Positives = 128/138 (92%)
 Frame = -3

Query: 876 SAVTWLCFTHDSEQIITSSKDGSMRIWNINVRYHLDEDPKTLKVFPIPLHDSNGTTLHYD 697
           SAVTWLCFT +SEQIIT+SKDGS+R WNINVRYHLDEDPKTLKVFPIPLHDS+G+TL YD
Sbjct: 47  SAVTWLCFTPNSEQIITASKDGSIRTWNINVRYHLDEDPKTLKVFPIPLHDSSGSTLLYD 106

Query: 696 RLSISPDGKILAATHGPLLQWLCAETGQVLDTADKAHDGDITDLAWAPRIIPMGDKQSMI 517
           RLSISPDGKILAATHG  LQWLC ETG+VLDTADKAHDGDIT +AWAP  +P+GD++S++
Sbjct: 107 RLSISPDGKILAATHGSTLQWLCTETGKVLDTADKAHDGDITCIAWAPEHLPIGDQKSLV 166

Query: 516 LATSSVDKKVKLWAAPPL 463
           LATSSVDKKVKLW APPL
Sbjct: 167 LATSSVDKKVKLWVAPPL 184


>ref|XP_002511720.1| nucleotide binding protein, putative [Ricinus communis]
           gi|223548900|gb|EEF50389.1| nucleotide binding protein,
           putative [Ricinus communis]
          Length = 438

 Score =  241 bits (614), Expect = 2e-61
 Identities = 113/136 (83%), Positives = 125/136 (91%)
 Frame = -3

Query: 876 SAVTWLCFTHDSEQIITSSKDGSMRIWNINVRYHLDEDPKTLKVFPIPLHDSNGTTLHYD 697
           SAVTWLCFT +SEQIIT+SKDGS+RIWNINVRYHLDEDPKTLKVFPIPLHDS+  TLHYD
Sbjct: 298 SAVTWLCFTSNSEQIITASKDGSIRIWNINVRYHLDEDPKTLKVFPIPLHDSHDATLHYD 357

Query: 696 RLSISPDGKILAATHGPLLQWLCAETGQVLDTADKAHDGDITDLAWAPRIIPMGDKQSMI 517
           RLS+SPDGKILAAT+G  LQWLC ETG+VLDTADKAHDG IT +AWAP+ IP GD Q+M+
Sbjct: 358 RLSLSPDGKILAATNGSTLQWLCVETGKVLDTADKAHDGQITWIAWAPKTIPNGDGQAMV 417

Query: 516 LATSSVDKKVKLWAAP 469
           LAT+SVDKKVKLWAAP
Sbjct: 418 LATASVDKKVKLWAAP 433


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