BLASTX nr result

ID: Panax21_contig00000563 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000563
         (742 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83935.1| hypothetical protein VITISV_035769 [Vitis vinifera]   244   2e-62
emb|CBI33251.3| unnamed protein product [Vitis vinifera]              241   1e-61
ref|XP_004141982.1| PREDICTED: pentatricopeptide repeat-containi...   210   2e-52
ref|XP_002271271.2| PREDICTED: uncharacterized protein LOC100243...   200   3e-49
ref|XP_002525278.1| GTP binding protein, putative [Ricinus commu...   186   6e-45

>emb|CAN83935.1| hypothetical protein VITISV_035769 [Vitis vinifera]
          Length = 490

 Score =  244 bits (622), Expect = 2e-62
 Identities = 126/233 (54%), Positives = 164/233 (70%)
 Frame = -1

Query: 700 PAIGLNPIEVDNKIKRNLLKQGVYPTPKIIHTLRKKNIHKTLRXXXXXXXXXXXXXXSDA 521
           P  G+ P     KIKRNL+++GVYPTPKIIHTLRKK I K++R                 
Sbjct: 5   PPTGI-PTPNTEKIKRNLIRKGVYPTPKIIHTLRKKEIQKSIRKSKRLANQNQSP----T 59

Query: 520 QKQELAEEAHFQTIKAEYKTFNKAINAKMTGKPWERLERGKLRELSSLSNEYGGEKLKSE 341
           + +E+ EEAHF+T+K EY   +KA+   M GKPWER      +E+ + S EYGGE+LK E
Sbjct: 60  EDEEVNEEAHFRTLKREYTKLSKAL---MVGKPWER---PGFKEILNGSVEYGGERLKRE 113

Query: 340 HLRELSHILEIEGDKFRWLLDDDIELEQGLVDDQRPNWTPPKRRGGDSEAILFLVDRLSG 161
           HLRELS ILE  G+  RWLLDDD+E+EQG   ++R  W+P +RRGGD++AI FLVDRL+ 
Sbjct: 114 HLRELSEILEKRGE-VRWLLDDDVEVEQGSSGNERRGWSPARRRGGDADAIRFLVDRLTA 172

Query: 160 TELTMKDWKFRRMMKQSQLQFTEVQLMKILEGLGDKGQWKHALSIVEWIYNSK 2
            ++T++DWKF R+MKQS LQFTE QL++I+E LG +G WKHALS+VEW+Y  K
Sbjct: 173 ADITIRDWKFSRVMKQSGLQFTERQLLRIVEELGARGHWKHALSVVEWVYTDK 225


>emb|CBI33251.3| unnamed protein product [Vitis vinifera]
          Length = 462

 Score =  241 bits (615), Expect = 1e-61
 Identities = 125/233 (53%), Positives = 163/233 (69%)
 Frame = -1

Query: 700 PAIGLNPIEVDNKIKRNLLKQGVYPTPKIIHTLRKKNIHKTLRXXXXXXXXXXXXXXSDA 521
           P  G+ P     KIKRNL+++GVYPTPKIIHTLRKK I K++R                 
Sbjct: 5   PPTGI-PTPNTEKIKRNLIRKGVYPTPKIIHTLRKKEIQKSIRKSKRLANQNQSP----T 59

Query: 520 QKQELAEEAHFQTIKAEYKTFNKAINAKMTGKPWERLERGKLRELSSLSNEYGGEKLKSE 341
           + +E+ EEAHF+T+K EY   +KA+   M GKPWER      +E+ + S EYGGE+LK E
Sbjct: 60  EDEEVNEEAHFRTLKREYTKLSKAL---MVGKPWER---PGFKEILNGSVEYGGERLKRE 113

Query: 340 HLRELSHILEIEGDKFRWLLDDDIELEQGLVDDQRPNWTPPKRRGGDSEAILFLVDRLSG 161
           HLRELS ILE  G+  RWLLDDD+E+EQG   ++R  W+P +RRGGD++AI FLVDRL+ 
Sbjct: 114 HLRELSEILEKRGE-VRWLLDDDVEVEQGSSGNERRGWSPARRRGGDADAIRFLVDRLTA 172

Query: 160 TELTMKDWKFRRMMKQSQLQFTEVQLMKILEGLGDKGQWKHALSIVEWIYNSK 2
            ++T++DWKF R+MKQS LQFTE QL++I+E LG +G WKH+LS+VEW Y  K
Sbjct: 173 ADITIRDWKFSRVMKQSGLQFTERQLLRIVEELGARGHWKHSLSVVEWAYTDK 225


>ref|XP_004141982.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
           chloroplastic-like [Cucumis sativus]
           gi|449499902|ref|XP_004160949.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g67570,
           chloroplastic-like [Cucumis sativus]
          Length = 860

 Score =  210 bits (535), Expect = 2e-52
 Identities = 112/230 (48%), Positives = 149/230 (64%), Gaps = 8/230 (3%)
 Frame = -1

Query: 667 NKIKRNLLKQGVYPTPKIIHTLRKKNIHKTLRXXXXXXXXXXXXXXS--DAQKQELAEEA 494
           +KIKR LL++GVYPTP+I+ +LRKK I K  R                 ++QKQ +AEE 
Sbjct: 20  DKIKRMLLQKGVYPTPRIVRSLRKKEIQKYNRKLKRVAERQSAQSPPLSESQKQLIAEET 79

Query: 493 HFQTIKAEYKTFNKAINAK-----MTGKPWERLERGKLRELSSLSNEYGGEKLKSEHLRE 329
           HF T+++EYK F+KAI AK     M G+PWERLER   +EL+ +   Y  + LK E LRE
Sbjct: 80  HFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVNFKELTGVRTGYNRDSLKKESLRE 139

Query: 328 LSHILEIEG-DKFRWLLDDDIELEQGLVDDQRPNWTPPKRRGGDSEAILFLVDRLSGTEL 152
           L  + E    ++ +W LDDD+EL++  ++ +   +   KRR GD E I FLVDRLS   +
Sbjct: 140 LRKLFETRKLEESQWALDDDVELKEEWLESENDRYDVVKRRRGDGEVIRFLVDRLSSGPI 199

Query: 151 TMKDWKFRRMMKQSQLQFTEVQLMKILEGLGDKGQWKHALSIVEWIYNSK 2
           +M+DWKF RMM +S LQF E QL+KIL+ LG KG WK ALS+VEW+YN K
Sbjct: 200 SMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALSVVEWVYNLK 249


>ref|XP_002271271.2| PREDICTED: uncharacterized protein LOC100243336 [Vitis vinifera]
          Length = 609

 Score =  200 bits (508), Expect = 3e-49
 Identities = 98/173 (56%), Positives = 130/173 (75%)
 Frame = -1

Query: 520 QKQELAEEAHFQTIKAEYKTFNKAINAKMTGKPWERLERGKLRELSSLSNEYGGEKLKSE 341
           + +E+ EEAHF+T+K EY   +KA+   M GKPWER      +E+ + S EYGGE+LK E
Sbjct: 198 EDEEVNEEAHFRTLKREYTKLSKAL---MVGKPWER---PGFKEILNGSVEYGGERLKRE 251

Query: 340 HLRELSHILEIEGDKFRWLLDDDIELEQGLVDDQRPNWTPPKRRGGDSEAILFLVDRLSG 161
           HLRELS ILE  G+  RWLLDDD+E+EQG   ++R  W+P +RRGGD++AI FLVDRL+ 
Sbjct: 252 HLRELSEILEKRGE-VRWLLDDDVEVEQGSSGNERRGWSPARRRGGDADAIRFLVDRLTA 310

Query: 160 TELTMKDWKFRRMMKQSQLQFTEVQLMKILEGLGDKGQWKHALSIVEWIYNSK 2
            ++T++DWKF R+MKQS LQFTE QL++I+E LG +G WKH+LS+VEW Y  K
Sbjct: 311 ADITIRDWKFSRVMKQSGLQFTERQLLRIVEELGARGHWKHSLSVVEWAYTDK 363


>ref|XP_002525278.1| GTP binding protein, putative [Ricinus communis]
           gi|223535436|gb|EEF37106.1| GTP binding protein,
           putative [Ricinus communis]
          Length = 1010

 Score =  186 bits (471), Expect = 6e-45
 Identities = 95/185 (51%), Positives = 128/185 (69%), Gaps = 11/185 (5%)
 Frame = -1

Query: 523 AQKQELAEEAHFQTIKAEYKTFNKAINAK--------MTGKPWERLERGKLRELSSLSNE 368
           +QKQ LAEE+HFQT+ +EY+TF KAI  +        + G+PWER+ER KLRE+ S SN+
Sbjct: 196 SQKQALAEESHFQTLTSEYRTFTKAIKGETRSSTSGLLVGRPWERIERVKLREIVSGSNQ 255

Query: 367 YGGEKLKSEHLRELSHILEIEGDKFRWLLDDDIELEQG---LVDDQRPNWTPPKRRGGDS 197
           + G KL  E LREL    E   D   W+LD+DIELE     L  + +  + P KRR  D 
Sbjct: 256 FNGNKLNVESLRELKENFE---DGLNWVLDNDIELENNDDWLSSENQWQYDPAKRRRNDK 312

Query: 196 EAILFLVDRLSGTELTMKDWKFRRMMKQSQLQFTEVQLMKILEGLGDKGQWKHALSIVEW 17
           E I FLVDRLS  ++T++DWK  ++MKQS L+F+E QLMKI+EGLG+KG+W+ A+++VEW
Sbjct: 313 EEIRFLVDRLSKRDVTVRDWKLAKIMKQSGLRFSEGQLMKIVEGLGNKGKWEQAMAVVEW 372

Query: 16  IYNSK 2
           +YN K
Sbjct: 373 VYNDK 377


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