BLASTX nr result

ID: Panax21_contig00000557 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000557
         (575 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65190.1| hypothetical protein VITISV_032101 [Vitis vinifera]    93   1e-26
ref|XP_002266998.1| PREDICTED: RNA polymerase II transcriptional...    93   1e-26
emb|CBI34506.3| unnamed protein product [Vitis vinifera]               87   7e-25
dbj|BAB41214.1| putative transcriptional coactivator [Brassica r...    84   3e-24
ref|NP_192830.1| RNA polymerase II transcriptional coactivator K...    79   1e-23

>emb|CAN65190.1| hypothetical protein VITISV_032101 [Vitis vinifera]
          Length = 320

 Score = 92.8 bits (229), Expect(2) = 1e-26
 Identities = 49/118 (41%), Positives = 71/118 (60%), Gaps = 14/118 (11%)
 Frame = -3

Query: 414 PKLQQKIEETVVEILKNSNMDETTEYKVRKMASEKLGLDLSPPERKQFVRKVVESYLADL 235
           P+ +++IE+TV+EILK+++MDE TE+KVRK+AS+KLG++LS P+ K+FVR+VVE++L   
Sbjct: 81  PETRRRIEKTVLEILKSADMDEMTEFKVRKLASDKLGINLSAPDYKRFVRQVVETFLQST 140

Query: 234 QSKXXXXXXXXXXXXXXXXXXEGQR--------------KGKRGGAKEYDDDGDLTIC 103
           +                      +R              +GK  G KEYDDDGDL IC
Sbjct: 141 EEPGREPEPEPEPDRKKANTEAAEREPTEEEEEEEVEEDRGKSSGVKEYDDDGDLIIC 198



 Score = 52.8 bits (125), Expect(2) = 1e-26
 Identities = 24/33 (72%), Positives = 30/33 (90%)
 Frame = -1

Query: 101 LTDKRRVTITDFKRKTLVSIREYYKKYGKELPT 3
           L+D+RRVTI DF+ KTLVSIRE+Y+K GKELP+
Sbjct: 200 LSDRRRVTIQDFRGKTLVSIREFYRKDGKELPS 232


>ref|XP_002266998.1| PREDICTED: RNA polymerase II transcriptional coactivator KELP-like
           [Vitis vinifera]
          Length = 187

 Score = 92.8 bits (229), Expect(2) = 1e-26
 Identities = 49/118 (41%), Positives = 71/118 (60%), Gaps = 14/118 (11%)
 Frame = -3

Query: 414 PKLQQKIEETVVEILKNSNMDETTEYKVRKMASEKLGLDLSPPERKQFVRKVVESYLADL 235
           P+ +++IE+TV+EILK+++MDE TE+KVRK+AS+KLG++LS P+ K+FVR+VVE++L   
Sbjct: 3   PETRRRIEKTVLEILKSADMDEMTEFKVRKLASDKLGINLSAPDYKRFVRQVVETFLQST 62

Query: 234 QSKXXXXXXXXXXXXXXXXXXEGQR--------------KGKRGGAKEYDDDGDLTIC 103
           +                      +R              +GK  G KEYDDDGDL IC
Sbjct: 63  EEPGREPEPEPEPDRKKANTEAAEREPTEEEEEEEVEEDRGKSSGVKEYDDDGDLIIC 120



 Score = 52.8 bits (125), Expect(2) = 1e-26
 Identities = 24/33 (72%), Positives = 30/33 (90%)
 Frame = -1

Query: 101 LTDKRRVTITDFKRKTLVSIREYYKKYGKELPT 3
           L+D+RRVTI DF+ KTLVSIRE+Y+K GKELP+
Sbjct: 122 LSDRRRVTIQDFRGKTLVSIREFYRKDGKELPS 154


>emb|CBI34506.3| unnamed protein product [Vitis vinifera]
          Length = 142

 Score = 86.7 bits (213), Expect(2) = 7e-25
 Identities = 46/104 (44%), Positives = 65/104 (62%)
 Frame = -3

Query: 414 PKLQQKIEETVVEILKNSNMDETTEYKVRKMASEKLGLDLSPPERKQFVRKVVESYLADL 235
           P+ +++IE+TV+EILK+++MDE TE+KVRK+AS+KLG++LS P+ K+FVR+VVE++L   
Sbjct: 3   PETRRRIEKTVLEILKSADMDEMTEFKVRKLASDKLGINLSAPDYKRFVRQVVETFL--- 59

Query: 234 QSKXXXXXXXXXXXXXXXXXXEGQRKGKRGGAKEYDDDGDLTIC 103
                                         G KEYDDDGDL IC
Sbjct: 60  ----------------------------HSGVKEYDDDGDLIIC 75



 Score = 52.8 bits (125), Expect(2) = 7e-25
 Identities = 24/33 (72%), Positives = 30/33 (90%)
 Frame = -1

Query: 101 LTDKRRVTITDFKRKTLVSIREYYKKYGKELPT 3
           L+D+RRVTI DF+ KTLVSIRE+Y+K GKELP+
Sbjct: 77  LSDRRRVTIQDFRGKTLVSIREFYRKDGKELPS 109


>dbj|BAB41214.1| putative transcriptional coactivator [Brassica rapa]
          Length = 165

 Score = 83.6 bits (205), Expect(2) = 3e-24
 Identities = 46/99 (46%), Positives = 61/99 (61%)
 Frame = -3

Query: 399 KIEETVVEILKNSNMDETTEYKVRKMASEKLGLDLSPPERKQFVRKVVESYLADLQSKXX 220
           KIEETV EILK S+M E TE+KVR +ASE+LG+DLS    K FVR +V+S+L +++SK  
Sbjct: 8   KIEETVREILKESDMTEMTEFKVRNLASERLGIDLSDKSHKAFVRGIVKSFLEEVESKQQ 67

Query: 219 XXXXXXXXXXXXXXXXEGQRKGKRGGAKEYDDDGDLTIC 103
                             + +  + G KE+DDDGDL IC
Sbjct: 68  QQQDKEEEEEE-------EEERAKEGNKEFDDDGDLIIC 99



 Score = 53.5 bits (127), Expect(2) = 3e-24
 Identities = 25/33 (75%), Positives = 30/33 (90%)
 Frame = -1

Query: 101 LTDKRRVTITDFKRKTLVSIREYYKKYGKELPT 3
           L+DKRRVTI +F+ K+LVSIREYYKK GKELP+
Sbjct: 101 LSDKRRVTIQEFRGKSLVSIREYYKKDGKELPS 133


>ref|NP_192830.1| RNA polymerase II transcriptional coactivator KELP [Arabidopsis
           thaliana] gi|145333013|ref|NP_001078372.1| RNA
           polymerase II transcriptional coactivator KELP
           [Arabidopsis thaliana]
           gi|37079408|sp|O65155.1|KELP_ARATH RecName: Full=RNA
           polymerase II transcriptional coactivator KELP
           gi|2997686|gb|AAC08575.1| putative transcriptional
           co-activator [Arabidopsis thaliana]
           gi|3513735|gb|AAC33951.1| contains similarity to RNA
           polymerase II transcription cofactor p15 [Arabidopsis
           thaliana] gi|4539366|emb|CAB40060.1| putative protein
           [Arabidopsis thaliana] gi|7267790|emb|CAB81193.1|
           putative protein [Arabidopsis thaliana]
           gi|21554027|gb|AAM63108.1| putative transcriptional
           coactivator [Arabidopsis thaliana]
           gi|29028806|gb|AAO64782.1| At4g10920 [Arabidopsis
           thaliana] gi|110736559|dbj|BAF00245.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|110738319|dbj|BAF01087.1| hypothetical protein
           [Arabidopsis thaliana] gi|332657543|gb|AEE82943.1| RNA
           polymerase II transcriptional coactivator KELP
           [Arabidopsis thaliana] gi|332657544|gb|AEE82944.1| RNA
           polymerase II transcriptional coactivator KELP
           [Arabidopsis thaliana]
          Length = 165

 Score = 79.0 bits (193), Expect(2) = 1e-23
 Identities = 45/101 (44%), Positives = 59/101 (58%)
 Frame = -3

Query: 405 QQKIEETVVEILKNSNMDETTEYKVRKMASEKLGLDLSPPERKQFVRKVVESYLADLQSK 226
           ++KIE+TV+EIL  S+M E TE+KVRK+ASEKL +DLS    K FVR VVE +L + +++
Sbjct: 6   KEKIEKTVIEILSESDMKEITEFKVRKLASEKLAIDLSEKSHKAFVRSVVEKFLDEERAR 65

Query: 225 XXXXXXXXXXXXXXXXXXEGQRKGKRGGAKEYDDDGDLTIC 103
                                 K    G KE+DDDGDL IC
Sbjct: 66  EYENSQVNKEEEDGD-------KDCGKGNKEFDDDGDLIIC 99



 Score = 56.2 bits (134), Expect(2) = 1e-23
 Identities = 27/33 (81%), Positives = 30/33 (90%)
 Frame = -1

Query: 101 LTDKRRVTITDFKRKTLVSIREYYKKYGKELPT 3
           L+DKRRVTI +FK K+LVSIREYYKK GKELPT
Sbjct: 101 LSDKRRVTIQEFKGKSLVSIREYYKKDGKELPT 133


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