BLASTX nr result
ID: Panax21_contig00000557
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00000557 (575 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN65190.1| hypothetical protein VITISV_032101 [Vitis vinifera] 93 1e-26 ref|XP_002266998.1| PREDICTED: RNA polymerase II transcriptional... 93 1e-26 emb|CBI34506.3| unnamed protein product [Vitis vinifera] 87 7e-25 dbj|BAB41214.1| putative transcriptional coactivator [Brassica r... 84 3e-24 ref|NP_192830.1| RNA polymerase II transcriptional coactivator K... 79 1e-23 >emb|CAN65190.1| hypothetical protein VITISV_032101 [Vitis vinifera] Length = 320 Score = 92.8 bits (229), Expect(2) = 1e-26 Identities = 49/118 (41%), Positives = 71/118 (60%), Gaps = 14/118 (11%) Frame = -3 Query: 414 PKLQQKIEETVVEILKNSNMDETTEYKVRKMASEKLGLDLSPPERKQFVRKVVESYLADL 235 P+ +++IE+TV+EILK+++MDE TE+KVRK+AS+KLG++LS P+ K+FVR+VVE++L Sbjct: 81 PETRRRIEKTVLEILKSADMDEMTEFKVRKLASDKLGINLSAPDYKRFVRQVVETFLQST 140 Query: 234 QSKXXXXXXXXXXXXXXXXXXEGQR--------------KGKRGGAKEYDDDGDLTIC 103 + +R +GK G KEYDDDGDL IC Sbjct: 141 EEPGREPEPEPEPDRKKANTEAAEREPTEEEEEEEVEEDRGKSSGVKEYDDDGDLIIC 198 Score = 52.8 bits (125), Expect(2) = 1e-26 Identities = 24/33 (72%), Positives = 30/33 (90%) Frame = -1 Query: 101 LTDKRRVTITDFKRKTLVSIREYYKKYGKELPT 3 L+D+RRVTI DF+ KTLVSIRE+Y+K GKELP+ Sbjct: 200 LSDRRRVTIQDFRGKTLVSIREFYRKDGKELPS 232 >ref|XP_002266998.1| PREDICTED: RNA polymerase II transcriptional coactivator KELP-like [Vitis vinifera] Length = 187 Score = 92.8 bits (229), Expect(2) = 1e-26 Identities = 49/118 (41%), Positives = 71/118 (60%), Gaps = 14/118 (11%) Frame = -3 Query: 414 PKLQQKIEETVVEILKNSNMDETTEYKVRKMASEKLGLDLSPPERKQFVRKVVESYLADL 235 P+ +++IE+TV+EILK+++MDE TE+KVRK+AS+KLG++LS P+ K+FVR+VVE++L Sbjct: 3 PETRRRIEKTVLEILKSADMDEMTEFKVRKLASDKLGINLSAPDYKRFVRQVVETFLQST 62 Query: 234 QSKXXXXXXXXXXXXXXXXXXEGQR--------------KGKRGGAKEYDDDGDLTIC 103 + +R +GK G KEYDDDGDL IC Sbjct: 63 EEPGREPEPEPEPDRKKANTEAAEREPTEEEEEEEVEEDRGKSSGVKEYDDDGDLIIC 120 Score = 52.8 bits (125), Expect(2) = 1e-26 Identities = 24/33 (72%), Positives = 30/33 (90%) Frame = -1 Query: 101 LTDKRRVTITDFKRKTLVSIREYYKKYGKELPT 3 L+D+RRVTI DF+ KTLVSIRE+Y+K GKELP+ Sbjct: 122 LSDRRRVTIQDFRGKTLVSIREFYRKDGKELPS 154 >emb|CBI34506.3| unnamed protein product [Vitis vinifera] Length = 142 Score = 86.7 bits (213), Expect(2) = 7e-25 Identities = 46/104 (44%), Positives = 65/104 (62%) Frame = -3 Query: 414 PKLQQKIEETVVEILKNSNMDETTEYKVRKMASEKLGLDLSPPERKQFVRKVVESYLADL 235 P+ +++IE+TV+EILK+++MDE TE+KVRK+AS+KLG++LS P+ K+FVR+VVE++L Sbjct: 3 PETRRRIEKTVLEILKSADMDEMTEFKVRKLASDKLGINLSAPDYKRFVRQVVETFL--- 59 Query: 234 QSKXXXXXXXXXXXXXXXXXXEGQRKGKRGGAKEYDDDGDLTIC 103 G KEYDDDGDL IC Sbjct: 60 ----------------------------HSGVKEYDDDGDLIIC 75 Score = 52.8 bits (125), Expect(2) = 7e-25 Identities = 24/33 (72%), Positives = 30/33 (90%) Frame = -1 Query: 101 LTDKRRVTITDFKRKTLVSIREYYKKYGKELPT 3 L+D+RRVTI DF+ KTLVSIRE+Y+K GKELP+ Sbjct: 77 LSDRRRVTIQDFRGKTLVSIREFYRKDGKELPS 109 >dbj|BAB41214.1| putative transcriptional coactivator [Brassica rapa] Length = 165 Score = 83.6 bits (205), Expect(2) = 3e-24 Identities = 46/99 (46%), Positives = 61/99 (61%) Frame = -3 Query: 399 KIEETVVEILKNSNMDETTEYKVRKMASEKLGLDLSPPERKQFVRKVVESYLADLQSKXX 220 KIEETV EILK S+M E TE+KVR +ASE+LG+DLS K FVR +V+S+L +++SK Sbjct: 8 KIEETVREILKESDMTEMTEFKVRNLASERLGIDLSDKSHKAFVRGIVKSFLEEVESKQQ 67 Query: 219 XXXXXXXXXXXXXXXXEGQRKGKRGGAKEYDDDGDLTIC 103 + + + G KE+DDDGDL IC Sbjct: 68 QQQDKEEEEEE-------EEERAKEGNKEFDDDGDLIIC 99 Score = 53.5 bits (127), Expect(2) = 3e-24 Identities = 25/33 (75%), Positives = 30/33 (90%) Frame = -1 Query: 101 LTDKRRVTITDFKRKTLVSIREYYKKYGKELPT 3 L+DKRRVTI +F+ K+LVSIREYYKK GKELP+ Sbjct: 101 LSDKRRVTIQEFRGKSLVSIREYYKKDGKELPS 133 >ref|NP_192830.1| RNA polymerase II transcriptional coactivator KELP [Arabidopsis thaliana] gi|145333013|ref|NP_001078372.1| RNA polymerase II transcriptional coactivator KELP [Arabidopsis thaliana] gi|37079408|sp|O65155.1|KELP_ARATH RecName: Full=RNA polymerase II transcriptional coactivator KELP gi|2997686|gb|AAC08575.1| putative transcriptional co-activator [Arabidopsis thaliana] gi|3513735|gb|AAC33951.1| contains similarity to RNA polymerase II transcription cofactor p15 [Arabidopsis thaliana] gi|4539366|emb|CAB40060.1| putative protein [Arabidopsis thaliana] gi|7267790|emb|CAB81193.1| putative protein [Arabidopsis thaliana] gi|21554027|gb|AAM63108.1| putative transcriptional coactivator [Arabidopsis thaliana] gi|29028806|gb|AAO64782.1| At4g10920 [Arabidopsis thaliana] gi|110736559|dbj|BAF00245.1| hypothetical protein [Arabidopsis thaliana] gi|110738319|dbj|BAF01087.1| hypothetical protein [Arabidopsis thaliana] gi|332657543|gb|AEE82943.1| RNA polymerase II transcriptional coactivator KELP [Arabidopsis thaliana] gi|332657544|gb|AEE82944.1| RNA polymerase II transcriptional coactivator KELP [Arabidopsis thaliana] Length = 165 Score = 79.0 bits (193), Expect(2) = 1e-23 Identities = 45/101 (44%), Positives = 59/101 (58%) Frame = -3 Query: 405 QQKIEETVVEILKNSNMDETTEYKVRKMASEKLGLDLSPPERKQFVRKVVESYLADLQSK 226 ++KIE+TV+EIL S+M E TE+KVRK+ASEKL +DLS K FVR VVE +L + +++ Sbjct: 6 KEKIEKTVIEILSESDMKEITEFKVRKLASEKLAIDLSEKSHKAFVRSVVEKFLDEERAR 65 Query: 225 XXXXXXXXXXXXXXXXXXEGQRKGKRGGAKEYDDDGDLTIC 103 K G KE+DDDGDL IC Sbjct: 66 EYENSQVNKEEEDGD-------KDCGKGNKEFDDDGDLIIC 99 Score = 56.2 bits (134), Expect(2) = 1e-23 Identities = 27/33 (81%), Positives = 30/33 (90%) Frame = -1 Query: 101 LTDKRRVTITDFKRKTLVSIREYYKKYGKELPT 3 L+DKRRVTI +FK K+LVSIREYYKK GKELPT Sbjct: 101 LSDKRRVTIQEFKGKSLVSIREYYKKDGKELPT 133