BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000550
         (792 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002535194.1| helicase, putative [Ricinus communis] gi|223...   135   1e-29
ref|XP_002308876.1| chromatin remodeling complex subunit [Populu...   131   1e-28
ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-a...   130   4e-28
emb|CBI32804.3| unnamed protein product [Vitis vinifera]              128   1e-27
ref|XP_002871139.1| SNF2 domain-containing protein [Arabidopsis ...   124   3e-26

>ref|XP_002535194.1| helicase, putative [Ricinus communis] gi|223523786|gb|EEF27189.1|
           helicase, putative [Ricinus communis]
          Length = 518

 Score =  135 bits (340), Expect = 1e-29
 Identities = 78/145 (53%), Positives = 95/145 (65%), Gaps = 7/145 (4%)
 Frame = -3

Query: 712 EIYMVGFVIAQIVGI*YNFGNIIGRKMVGLIQEPLNPHDPHTIVVFNTSELQVGYIERSV 533
           E ++VGFVIA IVG+ Y  G I GR++VGL++EPLNPHD + I V N   LQVG+IERSV
Sbjct: 30  ETFLVGFVIANIVGVRYYSGTITGRELVGLVREPLNPHDQNAIKVLNARSLQVGHIERSV 89

Query: 532 TEVLSPLLDQCLITVEGIVPNMPRRSITCNWYKIPCQIHIFAGPKGYEMVKSRIFGSGLH 353
             VLSPL+D   ITVEGIV N    S   N +KIPCQIHIFA  + +E VKS I   GL 
Sbjct: 90  ASVLSPLIDSQKITVEGIVANSRSNS---NKFKIPCQIHIFARFEDFERVKSEITRGGLV 146

Query: 352 LIVQ-------DEAHVVSDEARFSG 299
           LI +        EA VV ++ + SG
Sbjct: 147 LITEIDASFGLSEAMVVKEKNKKSG 171


>ref|XP_002308876.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222854852|gb|EEE92399.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 799

 Score =  131 bits (330), Expect = 1e-28
 Identities = 75/145 (51%), Positives = 95/145 (65%), Gaps = 7/145 (4%)
 Frame = -3

Query: 712 EIYMVGFVIAQIVGI*YNFGNIIGRKMVGLIQEPLNPHDPHTIVVFNTSELQVGYIERSV 533
           E +MVGFVIA IVG+ Y  G I GR++VGL++EPLNP D + + V NT  LQVG+IERSV
Sbjct: 6   ESFMVGFVIANIVGLQYYSGTITGRELVGLVREPLNPFDQNALKVLNTRCLQVGHIERSV 65

Query: 532 TEVLSPLLDQCLITVEGIVPNMPRRSITCNWYKIPCQIHIFAGPKGYEMVKSRIFGSGLH 353
             VLSPL+D  +I VEGIVPN        N YKIPCQ+H+FA  + +E VK+ I   GL 
Sbjct: 66  AAVLSPLIDSNMINVEGIVPNSRSGG---NKYKIPCQVHVFARVEDFESVKTAISRGGLV 122

Query: 352 LIVQ-------DEAHVVSDEARFSG 299
           L+ Q        EA VV ++ + SG
Sbjct: 123 LLSQMEVGFGLSEAMVVKEKNKKSG 147


>ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 1-like [Vitis vinifera]
          Length = 874

 Score =  130 bits (326), Expect = 4e-28
 Identities = 69/134 (51%), Positives = 88/134 (65%)
 Frame = -3

Query: 712 EIYMVGFVIAQIVGI*YNFGNIIGRKMVGLIQEPLNPHDPHTIVVFNTSELQVGYIERSV 533
           E Y+VGFVI  IVGI Y  G I GR+ VGL++EPLNP+D + I V NT+ +QVG+I+RS 
Sbjct: 39  ETYLVGFVIVNIVGIQYYSGTISGRERVGLVREPLNPYDRNAIKVLNTTTIQVGHIDRSA 98

Query: 532 TEVLSPLLDQCLITVEGIVPNMPRRSITCNWYKIPCQIHIFAGPKGYEMVKSRIFGSGLH 353
             VL+PL+D  L+TVEGIVPN P      N Y+IPCQ+HIFA  + +  V+S I   GL 
Sbjct: 99  AAVLAPLMDANLVTVEGIVPNTPGSG---NRYRIPCQVHIFAQIEWFPRVRSAISRGGLQ 155

Query: 352 LIVQDEAHVVSDEA 311
           LI   +      EA
Sbjct: 156 LISDSDPSFTLSEA 169


>emb|CBI32804.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  128 bits (322), Expect = 1e-27
 Identities = 67/122 (54%), Positives = 85/122 (69%)
 Frame = -3

Query: 712 EIYMVGFVIAQIVGI*YNFGNIIGRKMVGLIQEPLNPHDPHTIVVFNTSELQVGYIERSV 533
           E Y+VGFVI  IVGI Y  G I GR+ VGL++EPLNP+D + I V NT+ +QVG+I+RS 
Sbjct: 52  ETYLVGFVIVNIVGIQYYSGTISGRERVGLVREPLNPYDRNAIKVLNTTTIQVGHIDRSA 111

Query: 532 TEVLSPLLDQCLITVEGIVPNMPRRSITCNWYKIPCQIHIFAGPKGYEMVKSRIFGSGLH 353
             VL+PL+D  L+TVEGIVPN P      N Y+IPCQ+HIFA  + +  V+S I   GL 
Sbjct: 112 AAVLAPLMDANLVTVEGIVPNTPGSG---NRYRIPCQVHIFAQIEWFPRVRSAISRGGLQ 168

Query: 352 LI 347
           LI
Sbjct: 169 LI 170


>ref|XP_002871139.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
           gi|297316976|gb|EFH47398.1| SNF2 domain-containing
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 861

 Score =  124 bits (310), Expect = 3e-26
 Identities = 70/134 (52%), Positives = 86/134 (64%)
 Frame = -3

Query: 712 EIYMVGFVIAQIVGI*YNFGNIIGRKMVGLIQEPLNPHDPHTIVVFNTSELQVGYIERSV 533
           E Y++GFVIA IVG+ Y  G I GR+MVGL++EPLNP+D + I V NT   QVG+IER+V
Sbjct: 35  ESYLIGFVIANIVGLKYYSGRINGREMVGLVREPLNPYDNNAIRVLNTRSEQVGHIERTV 94

Query: 532 TEVLSPLLDQCLITVEGIVPNMPRRSITCNWYKIPCQIHIFAGPKGYEMVKSRIFGSGLH 353
             VL+PL+D   I VEGIVPN    S   N +KIPCQIH+FA  +    VKS I   GL 
Sbjct: 95  AAVLAPLIDSHTIIVEGIVPNTRSNS---NRFKIPCQIHVFAKLEASSTVKSTISRGGLV 151

Query: 352 LIVQDEAHVVSDEA 311
           LI   +      EA
Sbjct: 152 LISDSDTAFGLSEA 165