BLASTX nr result

ID: Panax21_contig00000547 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000547
         (738 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20950.3| unnamed protein product [Vitis vinifera]              451   e-125
ref|XP_002284652.1| PREDICTED: RING finger and CHY zinc finger d...   451   e-125
ref|XP_002309580.1| predicted protein [Populus trichocarpa] gi|1...   434   e-120
ref|XP_003550153.1| PREDICTED: RING finger and CHY zinc finger d...   429   e-118
ref|XP_003544629.1| PREDICTED: RING finger and CHY zinc finger d...   422   e-116

>emb|CBI20950.3| unnamed protein product [Vitis vinifera]
          Length = 294

 Score =  451 bits (1159), Expect = e-125
 Identities = 199/249 (79%), Positives = 225/249 (90%), Gaps = 6/249 (2%)
 Frame = -3

Query: 736 VESNAQQSHEECM-LTEKT-----TGEQLLDKGCLQFGCAHYRRRCRIRAPCCNDIFDCR 575
           V+S AQ S+ ECM + E T     T ++LL+KG +Q+GC HYRRRCRIRAPCCN+IFDCR
Sbjct: 11  VKSCAQHSNGECMEIKEPTDHVEITEKELLEKGYMQYGCPHYRRRCRIRAPCCNEIFDCR 70

Query: 574 HCHNEAKNNLDVDKNYRHDIPRHQVQQVICSLCNTEQEVRQVCINCGVCMGRYFCGTCKL 395
           HCHNEAKN++ VDK  RHDIPRHQVQQVICSLCNTEQEVRQVCINCGVCMG+YFC TCKL
Sbjct: 71  HCHNEAKNSIKVDKAQRHDIPRHQVQQVICSLCNTEQEVRQVCINCGVCMGKYFCETCKL 130

Query: 394 FDDDTSKEQYHCDGCGICRIGGQENFFHCDKCRCCYSVLLKDSHPCVEGAMHHDCPICFE 215
           FDDDTSK+QYHC+GCGICRIGG+ENFFHC KCRCCYSVLLK+SHPCVEGAMHHDCP+CFE
Sbjct: 131 FDDDTSKKQYHCNGCGICRIGGRENFFHCYKCRCCYSVLLKNSHPCVEGAMHHDCPVCFE 190

Query: 214 YLFESRNDVLVMPCGHTIHRNCMKEMQEHYQYSCPLCSKSVCDMSKVWERYDMEIAATPM 35
           YLFES +DV VMPCGHTIH+NC+KEM+EH QY+CPLCSKSVCDMSKVWE++DMEIAA PM
Sbjct: 191 YLFESTDDVTVMPCGHTIHQNCLKEMREHLQYACPLCSKSVCDMSKVWEKFDMEIAAIPM 250

Query: 34  PEHYRDKMV 8
           PE Y++KMV
Sbjct: 251 PEPYQNKMV 259


>ref|XP_002284652.1| PREDICTED: RING finger and CHY zinc finger domain-containing
           protein 1 [Vitis vinifera] gi|147785653|emb|CAN68688.1|
           hypothetical protein VITISV_029477 [Vitis vinifera]
          Length = 315

 Score =  451 bits (1159), Expect = e-125
 Identities = 199/249 (79%), Positives = 225/249 (90%), Gaps = 6/249 (2%)
 Frame = -3

Query: 736 VESNAQQSHEECM-LTEKT-----TGEQLLDKGCLQFGCAHYRRRCRIRAPCCNDIFDCR 575
           V+S AQ S+ ECM + E T     T ++LL+KG +Q+GC HYRRRCRIRAPCCN+IFDCR
Sbjct: 32  VKSCAQHSNGECMEIKEPTDHVEITEKELLEKGYMQYGCPHYRRRCRIRAPCCNEIFDCR 91

Query: 574 HCHNEAKNNLDVDKNYRHDIPRHQVQQVICSLCNTEQEVRQVCINCGVCMGRYFCGTCKL 395
           HCHNEAKN++ VDK  RHDIPRHQVQQVICSLCNTEQEVRQVCINCGVCMG+YFC TCKL
Sbjct: 92  HCHNEAKNSIKVDKAQRHDIPRHQVQQVICSLCNTEQEVRQVCINCGVCMGKYFCETCKL 151

Query: 394 FDDDTSKEQYHCDGCGICRIGGQENFFHCDKCRCCYSVLLKDSHPCVEGAMHHDCPICFE 215
           FDDDTSK+QYHC+GCGICRIGG+ENFFHC KCRCCYSVLLK+SHPCVEGAMHHDCP+CFE
Sbjct: 152 FDDDTSKKQYHCNGCGICRIGGRENFFHCYKCRCCYSVLLKNSHPCVEGAMHHDCPVCFE 211

Query: 214 YLFESRNDVLVMPCGHTIHRNCMKEMQEHYQYSCPLCSKSVCDMSKVWERYDMEIAATPM 35
           YLFES +DV VMPCGHTIH+NC+KEM+EH QY+CPLCSKSVCDMSKVWE++DMEIAA PM
Sbjct: 212 YLFESTDDVTVMPCGHTIHQNCLKEMREHLQYACPLCSKSVCDMSKVWEKFDMEIAAIPM 271

Query: 34  PEHYRDKMV 8
           PE Y++KMV
Sbjct: 272 PEPYQNKMV 280


>ref|XP_002309580.1| predicted protein [Populus trichocarpa] gi|118485648|gb|ABK94674.1|
           unknown [Populus trichocarpa]
           gi|222855556|gb|EEE93103.1| predicted protein [Populus
           trichocarpa]
          Length = 300

 Score =  434 bits (1117), Expect = e-120
 Identities = 184/244 (75%), Positives = 219/244 (89%), Gaps = 3/244 (1%)
 Frame = -3

Query: 730 SNAQQSHEECMLTEKTTG---EQLLDKGCLQFGCAHYRRRCRIRAPCCNDIFDCRHCHNE 560
           S +Q  +E+ + +E++      Q+LDKG +++GC HYRRRCRIRAPCCN++FDCRHCHNE
Sbjct: 22  SCSQHFNEDFIFSEESMNVETPQILDKGLMEYGCLHYRRRCRIRAPCCNEVFDCRHCHNE 81

Query: 559 AKNNLDVDKNYRHDIPRHQVQQVICSLCNTEQEVRQVCINCGVCMGRYFCGTCKLFDDDT 380
           AKNN++VD+ +RHD+PRH+V+QVICSLC TEQEV+QVCINCGVCMG+YFC TCKLFDDDT
Sbjct: 82  AKNNINVDQKHRHDMPRHEVKQVICSLCGTEQEVQQVCINCGVCMGKYFCETCKLFDDDT 141

Query: 379 SKEQYHCDGCGICRIGGQENFFHCDKCRCCYSVLLKDSHPCVEGAMHHDCPICFEYLFES 200
           SK+QYHCDGCGICRIGG ENFFHC KC CCYS LLK+SHPCVEGAMHHDCP+CFE+LFES
Sbjct: 142 SKKQYHCDGCGICRIGGPENFFHCYKCGCCYSNLLKNSHPCVEGAMHHDCPVCFEFLFES 201

Query: 199 RNDVLVMPCGHTIHRNCMKEMQEHYQYSCPLCSKSVCDMSKVWERYDMEIAATPMPEHYR 20
           R DV V+PCGHTIH +C+KEM++HYQY+CPLCSKSVCDMSKVWE++DMEIAATPMPE Y 
Sbjct: 202 RYDVTVLPCGHTIHESCLKEMRDHYQYACPLCSKSVCDMSKVWEKFDMEIAATPMPEPYL 261

Query: 19  DKMV 8
           +KMV
Sbjct: 262 NKMV 265


>ref|XP_003550153.1| PREDICTED: RING finger and CHY zinc finger domain-containing
           protein 1-like [Glycine max]
          Length = 308

 Score =  429 bits (1103), Expect = e-118
 Identities = 181/244 (74%), Positives = 212/244 (86%), Gaps = 2/244 (0%)
 Frame = -3

Query: 733 ESNAQQ--SHEECMLTEKTTGEQLLDKGCLQFGCAHYRRRCRIRAPCCNDIFDCRHCHNE 560
           ESN ++    E    T+      L ++G +++GC HYRRRCRIRAPCCN+IFDCRHCHNE
Sbjct: 32  ESNVERLPGEESSQSTDHKNINDLQERGYMEYGCQHYRRRCRIRAPCCNEIFDCRHCHNE 91

Query: 559 AKNNLDVDKNYRHDIPRHQVQQVICSLCNTEQEVRQVCINCGVCMGRYFCGTCKLFDDDT 380
           AKN++++D+ +RHDIPRHQV+QVICSLC TEQEV+Q CINCGVCMG+YFCGTCKLFDDD 
Sbjct: 92  AKNDINIDQKHRHDIPRHQVKQVICSLCGTEQEVQQNCINCGVCMGKYFCGTCKLFDDDI 151

Query: 379 SKEQYHCDGCGICRIGGQENFFHCDKCRCCYSVLLKDSHPCVEGAMHHDCPICFEYLFES 200
           SK+QYHC GCGICR GG ENFFHC KC CCYS LLK+SHPCVEGAMHHDCP+CFEYLFES
Sbjct: 152 SKQQYHCSGCGICRTGGSENFFHCYKCGCCYSTLLKNSHPCVEGAMHHDCPVCFEYLFES 211

Query: 199 RNDVLVMPCGHTIHRNCMKEMQEHYQYSCPLCSKSVCDMSKVWERYDMEIAATPMPEHYR 20
           RNDV VMPCGHTIH++C+ EM+EH+QYSCPLC KSVCDMSKVWE++D+EIAATPMPE Y+
Sbjct: 212 RNDVTVMPCGHTIHKSCLNEMREHFQYSCPLCLKSVCDMSKVWEKFDIEIAATPMPEQYQ 271

Query: 19  DKMV 8
           +KMV
Sbjct: 272 NKMV 275


>ref|XP_003544629.1| PREDICTED: RING finger and CHY zinc finger domain-containing
           protein 1-like isoform 1 [Glycine max]
          Length = 308

 Score =  422 bits (1085), Expect = e-116
 Identities = 180/244 (73%), Positives = 208/244 (85%), Gaps = 2/244 (0%)
 Frame = -3

Query: 733 ESNAQQ--SHEECMLTEKTTGEQLLDKGCLQFGCAHYRRRCRIRAPCCNDIFDCRHCHNE 560
           ESN       E    T+      L +KG +++GC HYRRRCRIRAPCCN+IFDCRHCHNE
Sbjct: 32  ESNVDHLPGEESSQSTDHKNINYLQEKGFMEYGCQHYRRRCRIRAPCCNEIFDCRHCHNE 91

Query: 559 AKNNLDVDKNYRHDIPRHQVQQVICSLCNTEQEVRQVCINCGVCMGRYFCGTCKLFDDDT 380
           AKN++++D   RHDIPRH+V+QVICSLC TEQEV+Q CINCGVCMG+YFCGTCKLFDDD 
Sbjct: 92  AKNDINIDLKLRHDIPRHEVKQVICSLCGTEQEVQQNCINCGVCMGKYFCGTCKLFDDDI 151

Query: 379 SKEQYHCDGCGICRIGGQENFFHCDKCRCCYSVLLKDSHPCVEGAMHHDCPICFEYLFES 200
           SK+QYHC GCGICR GG ENFFHC KC CCYS LLK+SHPCVEGAMHHDCP+CFEYLFES
Sbjct: 152 SKQQYHCCGCGICRTGGSENFFHCYKCGCCYSTLLKNSHPCVEGAMHHDCPVCFEYLFES 211

Query: 199 RNDVLVMPCGHTIHRNCMKEMQEHYQYSCPLCSKSVCDMSKVWERYDMEIAATPMPEHYR 20
           RNDV VMPCGHTIH++C+ EM+EH+QY+CPLCSKSVCDMSKVWE++D+EIAAT MPE Y+
Sbjct: 212 RNDVTVMPCGHTIHKSCLNEMREHFQYACPLCSKSVCDMSKVWEKFDLEIAATRMPEQYQ 271

Query: 19  DKMV 8
           +KMV
Sbjct: 272 NKMV 275


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