BLASTX nr result

ID: Panax21_contig00000543 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000543
         (479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27147.3| unnamed protein product [Vitis vinifera]              223   1e-56
ref|XP_003531053.1| PREDICTED: 60S ribosomal protein L44-like [G...   223   2e-56
emb|CBI24890.3| unnamed protein product [Vitis vinifera]              222   3e-56
ref|XP_002278981.1| PREDICTED: 60S ribosomal protein L44-like [V...   221   4e-56
ref|XP_003593138.1| 60S ribosomal protein L44 [Medicago truncatu...   221   4e-56

>emb|CBI27147.3| unnamed protein product [Vitis vinifera]
          Length = 314

 Score =  223 bits (569), Expect = 1e-56
 Identities = 105/106 (99%), Positives = 105/106 (99%)
 Frame = +3

Query: 141 TMVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFH 320
           TMVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFH
Sbjct: 209 TMVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFH 268

Query: 321 KKAKTTKKIVLRLQCQGCKHVSQHAIKRCKHFEIGGDKKGKGTSLF 458
           KKAKTTKKIVLRLQCQGCKHVSQH IKRCKHFEIGGDKKGKGTSLF
Sbjct: 269 KKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 314


>ref|XP_003531053.1| PREDICTED: 60S ribosomal protein L44-like [Glycine max]
           gi|356525904|ref|XP_003531561.1| PREDICTED: 60S
           ribosomal protein L44-like [Glycine max]
           gi|356558594|ref|XP_003547589.1| PREDICTED: 60S
           ribosomal protein L44-like [Glycine max]
          Length = 105

 Score =  223 bits (567), Expect = 2e-56
 Identities = 104/105 (99%), Positives = 105/105 (100%)
 Frame = +3

Query: 144 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK 323
           MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDS+AAQGKRRYDRKQSGYGGQTKPVFHK
Sbjct: 1   MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSIAAQGKRRYDRKQSGYGGQTKPVFHK 60

Query: 324 KAKTTKKIVLRLQCQGCKHVSQHAIKRCKHFEIGGDKKGKGTSLF 458
           KAKTTKKIVLRLQCQGCKHVSQHAIKRCKHFEIGGDKKGKGTSLF
Sbjct: 61  KAKTTKKIVLRLQCQGCKHVSQHAIKRCKHFEIGGDKKGKGTSLF 105


>emb|CBI24890.3| unnamed protein product [Vitis vinifera]
          Length = 140

 Score =  222 bits (565), Expect = 3e-56
 Identities = 105/111 (94%), Positives = 106/111 (95%)
 Frame = +3

Query: 126 P*QESTMVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQT 305
           P +   MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQT
Sbjct: 30  PPKPPKMVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQT 89

Query: 306 KPVFHKKAKTTKKIVLRLQCQGCKHVSQHAIKRCKHFEIGGDKKGKGTSLF 458
           KPVFHKKAKTTKKIVLRLQCQGCKHVSQH IKRCKHFEIGGDKKGKGTSLF
Sbjct: 90  KPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 140


>ref|XP_002278981.1| PREDICTED: 60S ribosomal protein L44-like [Vitis vinifera]
           gi|255543771|ref|XP_002512948.1| 60S ribosomal protein
           L44 [Ricinus communis] gi|449436355|ref|XP_004135958.1|
           PREDICTED: 60S ribosomal protein L44-like [Cucumis
           sativus] gi|449461677|ref|XP_004148568.1| PREDICTED: 60S
           ribosomal protein L44-like [Cucumis sativus]
           gi|449488799|ref|XP_004158175.1| PREDICTED: 60S
           ribosomal protein L44-like [Cucumis sativus]
           gi|449524246|ref|XP_004169134.1| PREDICTED: 60S
           ribosomal protein L44-like [Cucumis sativus]
           gi|2500380|sp|Q96499.3|RL44_GOSHI RecName: Full=60S
           ribosomal protein L44 gi|1553129|gb|AAB08726.1|
           ribosomal protein L44 isoform a [Gossypium hirsutum]
           gi|1553131|gb|AAB08727.1| ribosomal protein L44 isoform
           b [Gossypium hirsutum] gi|223547959|gb|EEF49451.1| 60S
           ribosomal protein L44 [Ricinus communis]
          Length = 105

 Score =  221 bits (564), Expect = 4e-56
 Identities = 104/105 (99%), Positives = 104/105 (99%)
 Frame = +3

Query: 144 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK 323
           MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK
Sbjct: 1   MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK 60

Query: 324 KAKTTKKIVLRLQCQGCKHVSQHAIKRCKHFEIGGDKKGKGTSLF 458
           KAKTTKKIVLRLQCQGCKHVSQH IKRCKHFEIGGDKKGKGTSLF
Sbjct: 61  KAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 105


>ref|XP_003593138.1| 60S ribosomal protein L44 [Medicago truncatula]
           gi|357510505|ref|XP_003625541.1| 60S ribosomal protein
           L44 [Medicago truncatula] gi|355482186|gb|AES63389.1|
           60S ribosomal protein L44 [Medicago truncatula]
           gi|355500556|gb|AES81759.1| 60S ribosomal protein L44
           [Medicago truncatula] gi|388495912|gb|AFK36022.1|
           unknown [Lotus japonicus] gi|388502154|gb|AFK39143.1|
           unknown [Medicago truncatula]
           gi|388512123|gb|AFK44123.1| unknown [Medicago
           truncatula] gi|388516165|gb|AFK46144.1| unknown [Lotus
           japonicus]
          Length = 105

 Score =  221 bits (564), Expect = 4e-56
 Identities = 103/105 (98%), Positives = 105/105 (100%)
 Frame = +3

Query: 144 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK 323
           MVNVPKTKKTYCKSKEC+KHTLHKVTQYKKGKDS+AAQGKRRYDRKQSGYGGQTKPVFHK
Sbjct: 1   MVNVPKTKKTYCKSKECKKHTLHKVTQYKKGKDSIAAQGKRRYDRKQSGYGGQTKPVFHK 60

Query: 324 KAKTTKKIVLRLQCQGCKHVSQHAIKRCKHFEIGGDKKGKGTSLF 458
           KAKTTKKIVLRLQCQGCKHVSQHAIKRCKHFEIGGDKKGKGTSLF
Sbjct: 61  KAKTTKKIVLRLQCQGCKHVSQHAIKRCKHFEIGGDKKGKGTSLF 105


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