BLASTX nr result

ID: Panax21_contig00000536 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000536
         (955 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_086989.1| ribosomal protein L20 [Panax ginseng] gi|680530...    57   8e-06
ref|YP_740140.1| ribosomal protein L20 [Daucus carota] gi|122221...    57   8e-06

>ref|YP_086989.1| ribosomal protein L20 [Panax ginseng]
           gi|68053097|sp|Q68RY3.1|RK20_PANGI RecName: Full=50S
           ribosomal protein L20, chloroplastic
           gi|51235336|gb|AAT98532.1| ribosomal protein L20 [Panax
           ginseng]
          Length = 128

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 25/27 (92%), Positives = 27/27 (100%)
 Frame = +1

Query: 151 LSNKNCLYIISNEIIKEVDWKESTGII 231
           +SNKNCLY+ISNEIIKEVDWKESTGII
Sbjct: 102 ISNKNCLYMISNEIIKEVDWKESTGII 128


>ref|YP_740140.1| ribosomal protein L20 [Daucus carota]
           gi|122221307|sp|Q0G9T9.1|RK20_DAUCA RecName: Full=50S
           ribosomal protein L20, chloroplastic
           gi|113200931|gb|ABI32447.1| ribosomal protein L20
           [Daucus carota]
          Length = 128

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 25/27 (92%), Positives = 27/27 (100%)
 Frame = +1

Query: 151 LSNKNCLYIISNEIIKEVDWKESTGII 231
           +SNKNCLY+ISNEIIKEVDWKESTGII
Sbjct: 102 ISNKNCLYMISNEIIKEVDWKESTGII 128


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