BLASTX nr result

ID: Panax21_contig00000534 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000534
         (710 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF00194.1|AF160961_1 protoporphyrinogen IX oxidase [Cichoriu...   174   2e-41
ref|XP_002302810.1| predicted protein [Populus trichocarpa] gi|2...   171   1e-40
gb|AFJ04120.1| plastid protoporphyrinogen IX oxidase, partial [A...   170   2e-40
ref|XP_004164093.1| PREDICTED: LOW QUALITY PROTEIN: protoporphyr...   169   5e-40
ref|XP_004149479.1| PREDICTED: protoporphyrinogen oxidase, chlor...   169   5e-40

>gb|AAF00194.1|AF160961_1 protoporphyrinogen IX oxidase [Cichorium intybus]
          Length = 555

 Score =  174 bits (441), Expect = 2e-41
 Identities = 100/166 (60%), Positives = 112/166 (67%), Gaps = 4/166 (2%)
 Frame = -2

Query: 487 MTSLTELHHFTCNGSHTLFPVSNSLFPTFLNSRNLSIKRRIS-GNGSTRRWRSRCSV--- 320
           MTSLT++    C  S +  P   S     L S+N       S  +    RWR RCS+   
Sbjct: 1   MTSLTDVCSLNCCRSWSSLPPPVS--GGSLTSKNPRYLITYSPAHRKCNRWRFRCSIAKD 58

Query: 319 STVTPPAKDVGSDGGESLLDCVIVGGGISGLCIAQALATKHQDQVPNVLVTEARDRVGGN 140
           S +TPP  +      + LLDCVIVG GISGLCIAQALATKH    P+V+VTEARDRVGGN
Sbjct: 59  SPITPPISN--EFNSQPLLDCVIVGAGISGLCIAQALATKHASVSPDVIVTEARDRVGGN 116

Query: 139 IITVERDGFLWEEGPNSFQPSDPMLAMVVDSGLKDDLVLGDPEAPR 2
           I TVERDG+LWEEGPNSFQPSD ML MVVDSGLKDDLVLGDP APR
Sbjct: 117 ISTVERDGYLWEEGPNSFQPSDAMLTMVVDSGLKDDLVLGDPTAPR 162


>ref|XP_002302810.1| predicted protein [Populus trichocarpa] gi|222844536|gb|EEE82083.1|
           predicted protein [Populus trichocarpa]
          Length = 543

 Score =  171 bits (433), Expect = 1e-40
 Identities = 88/122 (72%), Positives = 100/122 (81%), Gaps = 7/122 (5%)
 Frame = -2

Query: 346 RRWRSRCSVS----TVTPPAK--DVGSDGGESLL-DCVIVGGGISGLCIAQALATKHQDQ 188
           R ++ RCS++    T+TP     +  S+GG S   DCVIVGGGISGLCIAQALATKH+D 
Sbjct: 29  RPFKLRCSLTEESATITPSKLNGEAQSNGGHSAAADCVIVGGGISGLCIAQALATKHRDV 88

Query: 187 VPNVLVTEARDRVGGNIITVERDGFLWEEGPNSFQPSDPMLAMVVDSGLKDDLVLGDPEA 8
            PNV+VTEARDRVGGNI T+ERDG+LWEEGPNSFQPSDPML MVVDSGLK+DLVLGDP A
Sbjct: 89  APNVIVTEARDRVGGNITTLERDGYLWEEGPNSFQPSDPMLTMVVDSGLKEDLVLGDPNA 148

Query: 7   PR 2
           PR
Sbjct: 149 PR 150


>gb|AFJ04120.1| plastid protoporphyrinogen IX oxidase, partial [Ambrosia
           artemisiifolia]
          Length = 550

 Score =  170 bits (431), Expect = 2e-40
 Identities = 85/122 (69%), Positives = 97/122 (79%), Gaps = 1/122 (0%)
 Frame = -2

Query: 364 SGNGSTRRWRSRCSVSTVTPPAKDVGSDG-GESLLDCVIVGGGISGLCIAQALATKHQDQ 188
           + N + R     CS++  TP +  + +D   + LLDCVI+G GISGLCIAQALATKH D 
Sbjct: 36  NNNHNRRTTTFCCSIANDTPISPSITNDSTSQPLLDCVIIGAGISGLCIAQALATKHADV 95

Query: 187 VPNVLVTEARDRVGGNIITVERDGFLWEEGPNSFQPSDPMLAMVVDSGLKDDLVLGDPEA 8
            P+V+VTEARDRVGGNI TVERDG+LWEEGPNSFQPSDPML MVVDSGLKDDLVLGDP A
Sbjct: 96  SPDVVVTEARDRVGGNISTVERDGYLWEEGPNSFQPSDPMLTMVVDSGLKDDLVLGDPTA 155

Query: 7   PR 2
           PR
Sbjct: 156 PR 157


>ref|XP_004164093.1| PREDICTED: LOW QUALITY PROTEIN: protoporphyrinogen oxidase,
           chloroplastic-like [Cucumis sativus]
          Length = 549

 Score =  169 bits (428), Expect = 5e-40
 Identities = 79/110 (71%), Positives = 91/110 (82%)
 Frame = -2

Query: 331 RCSVSTVTPPAKDVGSDGGESLLDCVIVGGGISGLCIAQALATKHQDQVPNVLVTEARDR 152
           RCS++  +       +    S+LDCV+VG GISGLCIAQALATKH D  PN++VTEA+DR
Sbjct: 47  RCSIAEGSTALSPSNASSQSSILDCVVVGAGISGLCIAQALATKHPDVAPNIIVTEAKDR 106

Query: 151 VGGNIITVERDGFLWEEGPNSFQPSDPMLAMVVDSGLKDDLVLGDPEAPR 2
           VGGNI TVERDG+LWEEGPNSFQPSDP+L MVVDSGLKDDLVLGDP+APR
Sbjct: 107 VGGNITTVERDGYLWEEGPNSFQPSDPILTMVVDSGLKDDLVLGDPDAPR 156


>ref|XP_004149479.1| PREDICTED: protoporphyrinogen oxidase, chloroplastic-like [Cucumis
           sativus]
          Length = 549

 Score =  169 bits (428), Expect = 5e-40
 Identities = 79/110 (71%), Positives = 91/110 (82%)
 Frame = -2

Query: 331 RCSVSTVTPPAKDVGSDGGESLLDCVIVGGGISGLCIAQALATKHQDQVPNVLVTEARDR 152
           RCS++  +       +    S+LDCV+VG GISGLCIAQALATKH D  PN++VTEA+DR
Sbjct: 47  RCSIAEGSTALSPSNASSQSSILDCVVVGAGISGLCIAQALATKHPDVAPNIIVTEAKDR 106

Query: 151 VGGNIITVERDGFLWEEGPNSFQPSDPMLAMVVDSGLKDDLVLGDPEAPR 2
           VGGNI TVERDG+LWEEGPNSFQPSDP+L MVVDSGLKDDLVLGDP+APR
Sbjct: 107 VGGNITTVERDGYLWEEGPNSFQPSDPILTMVVDSGLKDDLVLGDPDAPR 156


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