BLASTX nr result
ID: Panax21_contig00000527
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00000527
(2343 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI23698.3| unnamed protein product [Vitis vinifera] 322 3e-85
ref|XP_002285419.1| PREDICTED: uncharacterized protein LOC100257... 322 3e-85
emb|CAN68016.1| hypothetical protein VITISV_025150 [Vitis vinifera] 322 3e-85
ref|XP_004147161.1| PREDICTED: heterogeneous nuclear ribonucleop... 319 2e-84
ref|XP_004173706.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneou... 317 7e-84
>emb|CBI23698.3| unnamed protein product [Vitis vinifera]
Length = 388
Score = 322 bits (825), Expect = 3e-85
Identities = 158/190 (83%), Positives = 172/190 (90%), Gaps = 1/190 (0%)
Frame = -2
Query: 2195 MDSDQGKLFIGGISWETSEEKLKDYFENYGEVVLTSVMRDKLTGRPRGFGFVVFADPSVL 2016
MDSDQGKLFIGGISWETSE+KLK+YF +YGEV VMRDK TGRPRGFGFVVFADPS+L
Sbjct: 1 MDSDQGKLFIGGISWETSEDKLKEYFGSYGEVSQAVVMRDKATGRPRGFGFVVFADPSIL 60
Query: 2015 DTVLQEKHVIDGRTVEAKRALSREEQQVS-KVGTPSAGRNFGGGGNVRTKKIFVGGLPPT 1839
D VLQEKH+IDGRTVEAKRALSREEQQ S + G ++ RN GGGGNV+TKKIFVGGLPPT
Sbjct: 61 DRVLQEKHIIDGRTVEAKRALSREEQQTSSRAGNFNSARNSGGGGNVKTKKIFVGGLPPT 120
Query: 1838 LSEDEFRQYFESYGHVTDVVVMYDQQTNRPRGFGFISFDLEDAVDRVLHKTFHDLNGKQV 1659
LSE+ FRQYFE++GHVTDVVVMYDQ T RPRGFGF+SFD EDAVDRVL+KTFHDLNGKQV
Sbjct: 121 LSEEGFRQYFEAFGHVTDVVVMYDQSTQRPRGFGFVSFDTEDAVDRVLYKTFHDLNGKQV 180
Query: 1658 EVKRALPKDA 1629
EVKRALPKDA
Sbjct: 181 EVKRALPKDA 190
Score = 83.6 bits (205), Expect = 2e-13
Identities = 56/106 (52%), Positives = 63/106 (59%)
Frame = -1
Query: 1143 NLQVELLGMGIKVMVMVDMVELMGLMEIQLHMVLLEVGLGVPQIAIPLLVESYRVVVGAT 964
NL ELLGM IKVM M MVE+ L +IQL M SYR VV AT
Sbjct: 272 NLLAELLGMEIKVMDMEGMVEVRDLTQIQLVM-------------------SYRGVVVAT 312
Query: 963 WEVAMVMPMEIQDMEIKDGDLTPHKPLGIMGLKPMDQMVGKLYMVV 826
WEVAMVM M IQDME++ G+L H+ L IM L+ M MVGKL MVV
Sbjct: 313 WEVAMVMLMGIQDMEMQHGNLIHHRLLEIMELRQMVLMVGKLAMVV 358
>ref|XP_002285419.1| PREDICTED: uncharacterized protein LOC100257917 [Vitis vinifera]
Length = 464
Score = 322 bits (825), Expect = 3e-85
Identities = 158/190 (83%), Positives = 172/190 (90%), Gaps = 1/190 (0%)
Frame = -2
Query: 2195 MDSDQGKLFIGGISWETSEEKLKDYFENYGEVVLTSVMRDKLTGRPRGFGFVVFADPSVL 2016
MDSDQGKLFIGGISWETSE+KLK+YF +YGEV VMRDK TGRPRGFGFVVFADPS+L
Sbjct: 1 MDSDQGKLFIGGISWETSEDKLKEYFGSYGEVSQAVVMRDKATGRPRGFGFVVFADPSIL 60
Query: 2015 DTVLQEKHVIDGRTVEAKRALSREEQQVS-KVGTPSAGRNFGGGGNVRTKKIFVGGLPPT 1839
D VLQEKH+IDGRTVEAKRALSREEQQ S + G ++ RN GGGGNV+TKKIFVGGLPPT
Sbjct: 61 DRVLQEKHIIDGRTVEAKRALSREEQQTSSRAGNFNSARNSGGGGNVKTKKIFVGGLPPT 120
Query: 1838 LSEDEFRQYFESYGHVTDVVVMYDQQTNRPRGFGFISFDLEDAVDRVLHKTFHDLNGKQV 1659
LSE+ FRQYFE++GHVTDVVVMYDQ T RPRGFGF+SFD EDAVDRVL+KTFHDLNGKQV
Sbjct: 121 LSEEGFRQYFEAFGHVTDVVVMYDQSTQRPRGFGFVSFDTEDAVDRVLYKTFHDLNGKQV 180
Query: 1658 EVKRALPKDA 1629
EVKRALPKDA
Sbjct: 181 EVKRALPKDA 190
Score = 90.5 bits (223), Expect = 2e-15
Identities = 46/79 (58%), Positives = 49/79 (62%)
Frame = -3
Query: 1063 NPAAYGAVGGRLGSAPNSNSPAXXXXXXXXXXXXXXXXXXXXGNSGYGNQGWRSDPSQAS 884
NP YGAVGGR GS PNSN+ GNSGYGN W+SDPSQAS
Sbjct: 375 NPTGYGAVGGRTGSGPNSNA-GGGELQGSGGGYMGGGYGDANGNSGYGNAAWKSDPSQAS 433
Query: 883 GNYGAQANGPNGGQVVYGG 827
GNYGAQ NGP+GGQV YGG
Sbjct: 434 GNYGAQTNGPHGGQVGYGG 452
Score = 71.2 bits (173), Expect = 1e-09
Identities = 42/99 (42%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Frame = -2
Query: 2177 KLFIGGISWETSEEKLKDYFENYGEVVLTSVMRDKLTGRPRGFGFVVFADPSVLDTVLQE 1998
K+F+GG+ SEE + YFE +G V VM D+ T RPRGFGFV F +D VL +
Sbjct: 111 KIFVGGLPPTLSEEGFRQYFEAFGHVTDVVVMYDQSTQRPRGFGFVSFDTEDAVDRVLYK 170
Query: 1997 K-HVIDGRTVEAKRALSREEQQVSKVGTPSAG-RNFGGG 1887
H ++G+ VE KRAL ++ P G R+ GGG
Sbjct: 171 TFHDLNGKQVEVKRALPKD-------ANPGGGSRSMGGG 202
>emb|CAN68016.1| hypothetical protein VITISV_025150 [Vitis vinifera]
Length = 464
Score = 322 bits (825), Expect = 3e-85
Identities = 158/190 (83%), Positives = 172/190 (90%), Gaps = 1/190 (0%)
Frame = -2
Query: 2195 MDSDQGKLFIGGISWETSEEKLKDYFENYGEVVLTSVMRDKLTGRPRGFGFVVFADPSVL 2016
MDSDQGKLFIGGISWETSE+KLK+YF +YGEV VMRDK TGRPRGFGFVVFADPS+L
Sbjct: 1 MDSDQGKLFIGGISWETSEDKLKEYFGSYGEVSQAVVMRDKATGRPRGFGFVVFADPSIL 60
Query: 2015 DTVLQEKHVIDGRTVEAKRALSREEQQVS-KVGTPSAGRNFGGGGNVRTKKIFVGGLPPT 1839
D VLQEKH+IDGRTVEAKRALSREEQQ S + G ++ RN GGGGNV+TKKIFVGGLPPT
Sbjct: 61 DRVLQEKHIIDGRTVEAKRALSREEQQTSSRAGNFNSARNSGGGGNVKTKKIFVGGLPPT 120
Query: 1838 LSEDEFRQYFESYGHVTDVVVMYDQQTNRPRGFGFISFDLEDAVDRVLHKTFHDLNGKQV 1659
LSE+ FRQYFE++GHVTDVVVMYDQ T RPRGFGF+SFD EDAVDRVL+KTFHDLNGKQV
Sbjct: 121 LSEEGFRQYFEAFGHVTDVVVMYDQSTQRPRGFGFVSFDTEDAVDRVLYKTFHDLNGKQV 180
Query: 1658 EVKRALPKDA 1629
EVKRALPKDA
Sbjct: 181 EVKRALPKDA 190
Score = 90.5 bits (223), Expect = 2e-15
Identities = 46/79 (58%), Positives = 49/79 (62%)
Frame = -3
Query: 1063 NPAAYGAVGGRLGSAPNSNSPAXXXXXXXXXXXXXXXXXXXXGNSGYGNQGWRSDPSQAS 884
NP YGAVGGR GS PNSN+ GNSGYGN W+SDPSQAS
Sbjct: 375 NPTGYGAVGGRTGSGPNSNA-GGGELQGSGGGYMGGGYGDANGNSGYGNASWKSDPSQAS 433
Query: 883 GNYGAQANGPNGGQVVYGG 827
GNYGAQ NGP+GGQV YGG
Sbjct: 434 GNYGAQTNGPHGGQVGYGG 452
Score = 71.2 bits (173), Expect = 1e-09
Identities = 42/99 (42%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Frame = -2
Query: 2177 KLFIGGISWETSEEKLKDYFENYGEVVLTSVMRDKLTGRPRGFGFVVFADPSVLDTVLQE 1998
K+F+GG+ SEE + YFE +G V VM D+ T RPRGFGFV F +D VL +
Sbjct: 111 KIFVGGLPPTLSEEGFRQYFEAFGHVTDVVVMYDQSTQRPRGFGFVSFDTEDAVDRVLYK 170
Query: 1997 K-HVIDGRTVEAKRALSREEQQVSKVGTPSAG-RNFGGG 1887
H ++G+ VE KRAL ++ P G R+ GGG
Sbjct: 171 TFHDLNGKQVEVKRALPKD-------ANPGGGSRSMGGG 202
>ref|XP_004147161.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Cucumis
sativus]
Length = 462
Score = 319 bits (818), Expect = 2e-84
Identities = 157/191 (82%), Positives = 171/191 (89%), Gaps = 2/191 (1%)
Frame = -2
Query: 2195 MDSDQGKLFIGGISWETSEEKLKDYFENYGEVVLTSVMRDKLTGRPRGFGFVVFADPSVL 2016
MDSDQGKLFIGGISWETSE+KLKDYF NYGEV+ T VMRDK+T RPRGFGFVVF+DPSVL
Sbjct: 1 MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60
Query: 2015 DTVLQEKHVIDGRTVEAKRALSREEQQVSKVGTPSAGRNFG--GGGNVRTKKIFVGGLPP 1842
D VLQ+KH IDG+TVEAKRALSREEQQ + S GRN G GGGN+RTKKIFVGGLPP
Sbjct: 61 DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNGRNSGGSGGGNMRTKKIFVGGLPP 120
Query: 1841 TLSEDEFRQYFESYGHVTDVVVMYDQQTNRPRGFGFISFDLEDAVDRVLHKTFHDLNGKQ 1662
TL+E+ F++YFE+YGHVTDVVVMYDQ T RPRGFGFISFD E+AVDRVLHKTFHDLNGKQ
Sbjct: 121 TLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQ 180
Query: 1661 VEVKRALPKDA 1629
VEVKRALPKDA
Sbjct: 181 VEVKRALPKDA 191
>ref|XP_004173706.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein D-like [Cucumis sativus]
Length = 462
Score = 317 bits (813), Expect = 7e-84
Identities = 156/191 (81%), Positives = 170/191 (89%), Gaps = 2/191 (1%)
Frame = -2
Query: 2195 MDSDQGKLFIGGISWETSEEKLKDYFENYGEVVLTSVMRDKLTGRPRGFGFVVFADPSVL 2016
MDSDQGKLFIGGISWETSE+KLKDYF NYGEV+ T VMRDK+T RPRGFGFVVF+DPSVL
Sbjct: 1 MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60
Query: 2015 DTVLQEKHVIDGRTVEAKRALSREEQQVSKVGTPSAGRNFG--GGGNVRTKKIFVGGLPP 1842
D VLQ+KH IDG+TVEAKRALSREEQQ + S GRN G GGGN+RTKK FVGGLPP
Sbjct: 61 DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNGRNSGGSGGGNMRTKKXFVGGLPP 120
Query: 1841 TLSEDEFRQYFESYGHVTDVVVMYDQQTNRPRGFGFISFDLEDAVDRVLHKTFHDLNGKQ 1662
TL+E+ F++YFE+YGHVTDVVVMYDQ T RPRGFGFISFD E+AVDRVLHKTFHDLNGKQ
Sbjct: 121 TLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQ 180
Query: 1661 VEVKRALPKDA 1629
VEVKRALPKDA
Sbjct: 181 VEVKRALPKDA 191