BLASTX nr result

ID: Panax21_contig00000517 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000517
         (890 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pen...   351   1e-94
emb|CBI17645.3| unnamed protein product [Vitis vinifera]              351   1e-94
emb|CAN82640.1| hypothetical protein VITISV_028821 [Vitis vinifera]   351   1e-94
ref|XP_002514857.1| pentatricopeptide repeat-containing protein,...   332   9e-89
ref|XP_002325903.1| predicted membrane protein [Populus trichoca...   326   4e-87

>ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g23330 [Vitis vinifera]
          Length = 1008

 Score =  351 bits (901), Expect = 1e-94
 Identities = 191/249 (76%), Positives = 201/249 (80%)
 Frame = -1

Query: 833 LGGRSQIVLNDHEGDSTRDKNDREVIGADLNLDPGLGVFDAFFASLSMILVSEIGDETFI 654
           LG RS+IVL D E ++T DK D + I  DL+LD GLGVFDAFFASLSMI+VSEIGDETFI
Sbjct: 43  LGRRSKIVLEDLEVETTGDKKDPDSISLDLSLDSGLGVFDAFFASLSMIIVSEIGDETFI 102

Query: 653 IAALMAMRHPKSIVLSGALSALYVMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFGLRL 474
           IAALMAMRHPKSIVLSGALSAL VMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFGLRL
Sbjct: 103 IAALMAMRHPKSIVLSGALSALIVMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFGLRL 162

Query: 473 LYIAWRXXXXXXXXXXXXXXXXXXXSGQGKTSVRRSFSRFCTPIFLESFILTFLAEWGDR 294
           LYIAWR                   SGQGKTS RR FSRFCTPIFLESFILTFLAEWGDR
Sbjct: 163 LYIAWRSDSKASQKKEMEEVEEKLESGQGKTSFRRFFSRFCTPIFLESFILTFLAEWGDR 222

Query: 293 SQIATIALATHKNALGVTVGASLGHTICTSLAVVGGSMLASKISQGTVATIXXXXXXXXX 114
           SQIATIALATHKNA+GV VGA++GHTICTSLAVVGGSMLASKISQGTVAT+         
Sbjct: 223 SQIATIALATHKNAIGVAVGATIGHTICTSLAVVGGSMLASKISQGTVATVGGLLFLGFS 282

Query: 113 XXXXXYPPL 87
                YPPL
Sbjct: 283 LSSYFYPPL 291


>emb|CBI17645.3| unnamed protein product [Vitis vinifera]
          Length = 291

 Score =  351 bits (901), Expect = 1e-94
 Identities = 191/249 (76%), Positives = 201/249 (80%)
 Frame = -1

Query: 833 LGGRSQIVLNDHEGDSTRDKNDREVIGADLNLDPGLGVFDAFFASLSMILVSEIGDETFI 654
           LG RS+IVL D E ++T DK D + I  DL+LD GLGVFDAFFASLSMI+VSEIGDETFI
Sbjct: 43  LGRRSKIVLEDLEVETTGDKKDPDSISLDLSLDSGLGVFDAFFASLSMIIVSEIGDETFI 102

Query: 653 IAALMAMRHPKSIVLSGALSALYVMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFGLRL 474
           IAALMAMRHPKSIVLSGALSAL VMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFGLRL
Sbjct: 103 IAALMAMRHPKSIVLSGALSALIVMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFGLRL 162

Query: 473 LYIAWRXXXXXXXXXXXXXXXXXXXSGQGKTSVRRSFSRFCTPIFLESFILTFLAEWGDR 294
           LYIAWR                   SGQGKTS RR FSRFCTPIFLESFILTFLAEWGDR
Sbjct: 163 LYIAWRSDSKASQKKEMEEVEEKLESGQGKTSFRRFFSRFCTPIFLESFILTFLAEWGDR 222

Query: 293 SQIATIALATHKNALGVTVGASLGHTICTSLAVVGGSMLASKISQGTVATIXXXXXXXXX 114
           SQIATIALATHKNA+GV VGA++GHTICTSLAVVGGSMLASKISQGTVAT+         
Sbjct: 223 SQIATIALATHKNAIGVAVGATIGHTICTSLAVVGGSMLASKISQGTVATVGGLLFLGFS 282

Query: 113 XXXXXYPPL 87
                YPPL
Sbjct: 283 LSSYFYPPL 291


>emb|CAN82640.1| hypothetical protein VITISV_028821 [Vitis vinifera]
          Length = 291

 Score =  351 bits (901), Expect = 1e-94
 Identities = 191/249 (76%), Positives = 201/249 (80%)
 Frame = -1

Query: 833 LGGRSQIVLNDHEGDSTRDKNDREVIGADLNLDPGLGVFDAFFASLSMILVSEIGDETFI 654
           LG RS+IVL D E ++T DK D + I  DL+LD GLGVFDAFFASLSMI+VSEIGDETFI
Sbjct: 43  LGRRSKIVLEDLEVETTGDKKDPDSISLDLSLDSGLGVFDAFFASLSMIIVSEIGDETFI 102

Query: 653 IAALMAMRHPKSIVLSGALSALYVMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFGLRL 474
           IAALMAMRHPKSIVLSGALSAL VMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFGLRL
Sbjct: 103 IAALMAMRHPKSIVLSGALSALIVMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFGLRL 162

Query: 473 LYIAWRXXXXXXXXXXXXXXXXXXXSGQGKTSVRRSFSRFCTPIFLESFILTFLAEWGDR 294
           LYIAWR                   SGQGKTS RR FSRFCTPIFLESFILTFLAEWGDR
Sbjct: 163 LYIAWRSDSKASQKKEMEEVEEKLESGQGKTSFRRFFSRFCTPIFLESFILTFLAEWGDR 222

Query: 293 SQIATIALATHKNALGVTVGASLGHTICTSLAVVGGSMLASKISQGTVATIXXXXXXXXX 114
           SQIATIALATHKNA+GV VGA++GHTICTSLAVVGGSMLASKISQGTVAT+         
Sbjct: 223 SQIATIALATHKNAIGVAVGATIGHTICTSLAVVGGSMLASKISQGTVATVGGLLFLGFS 282

Query: 113 XXXXXYPPL 87
                YPPL
Sbjct: 283 LSSYFYPPL 291


>ref|XP_002514857.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545908|gb|EEF47411.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 832

 Score =  332 bits (850), Expect = 9e-89
 Identities = 189/282 (67%), Positives = 206/282 (73%)
 Frame = -1

Query: 890 KDDSNASNKDLGWRSKERVLGGRSQIVLNDHEGDSTRDKNDREVIGADLNLDPGLGVFDA 711
           K++S AS KDLG          R  IV  D +G+S         +   L++D GLGVFDA
Sbjct: 34  KEESTASIKDLG---------RRGMIVTKDIDGNS---------VNLGLHVDSGLGVFDA 75

Query: 710 FFASLSMILVSEIGDETFIIAALMAMRHPKSIVLSGALSALYVMTVLSTGLGRIVPNLIS 531
           F ASLSMI+VSEIGDETFIIAALMAMRHPKSIVLSGAL+AL VMTVLSTGLGRIVPNLIS
Sbjct: 76  FIASLSMIIVSEIGDETFIIAALMAMRHPKSIVLSGALTALIVMTVLSTGLGRIVPNLIS 135

Query: 530 RKHTNSAATVLYAFFGLRLLYIAWRXXXXXXXXXXXXXXXXXXXSGQGKTSVRRSFSRFC 351
           RKHTNSAATVLYAFFGLRLLYIAWR                   SGQGKT+ RR FSRFC
Sbjct: 136 RKHTNSAATVLYAFFGLRLLYIAWRSDSKVSQKKEMEEVEEKLESGQGKTTFRRFFSRFC 195

Query: 350 TPIFLESFILTFLAEWGDRSQIATIALATHKNALGVTVGASLGHTICTSLAVVGGSMLAS 171
           TPIFLESFILTFLAEWGDRSQIATIALATHKNA+GV VGA++GHTICTSLAVVGGSMLAS
Sbjct: 196 TPIFLESFILTFLAEWGDRSQIATIALATHKNAIGVAVGATIGHTICTSLAVVGGSMLAS 255

Query: 170 KISQGTVATIXXXXXXXXXXXXXXYPPL*VGNCRLTGTQMHK 45
           KISQGTVATI              YPPL + +   + +  HK
Sbjct: 256 KISQGTVATIGGLLFLGFSLSSYFYPPLFLQSLSSSYSNNHK 297


>ref|XP_002325903.1| predicted membrane protein [Populus trichocarpa]
           gi|222862778|gb|EEF00285.1| predicted membrane protein
           [Populus trichocarpa]
          Length = 284

 Score =  326 bits (836), Expect = 4e-87
 Identities = 177/236 (75%), Positives = 187/236 (79%)
 Frame = -1

Query: 794 GDSTRDKNDREVIGADLNLDPGLGVFDAFFASLSMILVSEIGDETFIIAALMAMRHPKSI 615
           G   R+ +D +  G  L L+ GLG+FDAFFASLSMILVSEIGDETFIIAALMAMRHPKS 
Sbjct: 49  GMVVRNGDDAKSAGNGLKLESGLGIFDAFFASLSMILVSEIGDETFIIAALMAMRHPKST 108

Query: 614 VLSGALSALYVMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWRXXXXXXX 435
           VLSGAL+AL VMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWR       
Sbjct: 109 VLSGALTALIVMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWRSDSKSSQ 168

Query: 434 XXXXXXXXXXXXSGQGKTSVRRSFSRFCTPIFLESFILTFLAEWGDRSQIATIALATHKN 255
                       +GQGKTS RR FSRFCTPIFLESFILTFLAEWGDRSQIATIALATHKN
Sbjct: 169 KKEMEEVEEKLEAGQGKTSFRRYFSRFCTPIFLESFILTFLAEWGDRSQIATIALATHKN 228

Query: 254 ALGVTVGASLGHTICTSLAVVGGSMLASKISQGTVATIXXXXXXXXXXXXXXYPPL 87
           A+GV VGA+LGHTICTSLAVVGGS+LASKISQGTVATI              YPPL
Sbjct: 229 AIGVAVGATLGHTICTSLAVVGGSLLASKISQGTVATIGGLLFLCFSLSSYFYPPL 284


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